FFCP PHASE1:Hg19::chr14:50065770..50065781,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:50065770..50065781,+ to FFCP PHASE1:Hg19::chr14:50065770..50065781,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=122769 | |EntrezGene=122769 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19742 | |HGNC=19742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=355bp_to_NR_037792,NR_037793,uc001wwp.2,uc010ank.2_5end | |||
|cluster_id=chr14:50065770..50065781,+ | |||
|description=CAGE_peak_7_at_LRR1_5end | |||
|id=chr14:50065770..50065781,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;3.13e-28;2!CL:0001016;3.13e-28;2!CL:0000228;6.21e-15;1!CL:0002372;6.21e-15;1!CL:0002127;1.50e-14;1!CL:0000911;1.50e-14;1!CL:0000814;1.50e-14;1!CL:0000453;6.69e-12;5!CL:0000840;4.54e-10;5!CL:0000990;5.36e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.14e-28,2;CL:0001016,3.14e-28,2;CL:0000228,6.22e-15,1;CL:0002372,6.22e-15,1;CL:0002127,3.15e-14,1;CL:0000914,3.15e-14,1;CL:0000911,3.15e-14,1;CL:0000814,3.15e-14,1;CL:0002042,3.15e-14,1;CL:0002039,3.15e-14,1;CL:0002040,3.15e-14,1;CL:0002041,3.15e-14,1;CL:0000453,6.70e-12,5;CL:0000840,4.54e-10,5;CL:0001029,4.54e-10,5;CL:0002032,1.32e-08,161;CL:0000837,1.32e-08,161;CL:0000037,3.43e-08,168;CL:0000893,9.19e-08,2;CL:0002489,9.19e-08,2;CL:0000809,9.19e-08,2;CL:0000808,9.19e-08,2;CL:0000894,9.19e-08,2;CL:0000806,9.19e-08,2;CL:0000807,9.19e-08,2;CL:0000805,9.19e-08,2;CL:0002425,9.19e-08,2;CL:0000988,1.05e-07,177;CL:0000990,5.37e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002425;6.35e-08;2 | |||
|ontology_enrichment_disease=DOID:14566!1.34e-26!239;DOID:162!1.39e-26!235;DOID:0050687!2.54e-14!143;DOID:305!2.49e-13!106;DOID:2531!4.11e-12!51;DOID:0060083!4.11e-12!51;DOID:0050686!1.42e-10!137;DOID:1240!1.48e-08!39;DOID:7!6.32e-08!39;DOID:0060058!6.70e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.87e-11;51!DOID:0060083;3.87e-11;51!DOID:1240;3.32e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.07e-15,51;DOID:0060083,1.07e-15,51;DOID:1240,7.87e-12,39;DOID:0050686,9.46e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@LRR1 | |||
}} | }} |
Latest revision as of 02:04, 20 September 2015
Short description: | p7@LRR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LRR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 355bp_to_NR_037792, NR_037793, uc001wwp.2, uc010ank.2_5end |
EntrezGene: | LRR1 |
HGNC: | 19742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.14e-28 | 2 |
immature CD1a-positive Langerhans cell | 3.14e-28 | 2 |
multinucleate cell | 6.22e-15 | 1 |
myotube | 6.22e-15 | 1 |
innate effector T cell | 3.15e-14 | 1 |
immature NK T cell | 3.15e-14 | 1 |
effector T cell | 3.15e-14 | 1 |
mature NK T cell | 3.15e-14 | 1 |
immature NK T cell stage IV | 3.15e-14 | 1 |
immature NK T cell stage I | 3.15e-14 | 1 |
immature NK T cell stage II | 3.15e-14 | 1 |
immature NK T cell stage III | 3.15e-14 | 1 |
Langerhans cell | 6.70e-12 | 5 |
immature conventional dendritic cell | 4.54e-10 | 5 |
common dendritic progenitor | 4.54e-10 | 5 |
hematopoietic oligopotent progenitor cell | 1.32e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.32e-08 | 161 |
hematopoietic stem cell | 3.43e-08 | 168 |
thymocyte | 9.19e-08 | 2 |
double negative thymocyte | 9.19e-08 | 2 |
double-positive, alpha-beta thymocyte | 9.19e-08 | 2 |
DN4 thymocyte | 9.19e-08 | 2 |
DN1 thymic pro-T cell | 9.19e-08 | 2 |
DN2 thymocyte | 9.19e-08 | 2 |
DN3 thymocyte | 9.19e-08 | 2 |
immature single positive thymocyte | 9.19e-08 | 2 |
early T lineage precursor | 9.19e-08 | 2 |
hematopoietic cell | 1.05e-07 | 177 |
conventional dendritic cell | 5.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.07e-15 | 51 |
immune system cancer | 1.07e-15 | 51 |
leukemia | 7.87e-12 | 39 |
organ system cancer | 9.46e-07 | 137 |