FFCP PHASE1:Hg19::chr14:23446021..23446070,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:23446021..23446070,- to FFCP PHASE1:Hg19::chr14:23446021..23446070,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84962 | |EntrezGene=84962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20250 | |HGNC=20250 | ||
|TSSclassifier=strong | |||
|UniProt=G3V481 | |UniProt=G3V481 | ||
|association_with_transcript=0bp_to_ENST00000553592_5end | |||
|cluster_id=chr14:23446021..23446070,- | |||
|description=CAGE_peak_7_at_AJUBA_5end | |||
|id=chr14:23446021..23446070,- | |||
|ontology_enrichment_celltype=CL:0000066!2.55e-24!254;CL:0000548!4.66e-17!679;CL:0000004!4.66e-17!679;CL:0000255!4.66e-17!679;CL:0000012!1.78e-16!682;CL:0000220!2.15e-16!246;CL:0002321!7.15e-16!248;CL:0000055!1.44e-10!180;CL:0000003!1.03e-09!722;CL:0000076!3.08e-09!62;CL:0000063!4.72e-09!578;CL:0000057!6.71e-08!75;CL:0002076!1.50e-07!43;CL:0000223!1.77e-07!59;CL:0000222!4.30e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002368;5.86e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.03e-16,253;CL:0002368,3.32e-08,13;CL:0002076,2.81e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.60e-11!143;DOID:305!9.14e-11!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.90e-10,106;DOID:0050687,1.62e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002100!7.54e-11!216;UBERON:0003104!1.56e-10!238;UBERON:0009142!1.56e-10!238;UBERON:0004119!5.33e-09!169;UBERON:0000925!5.33e-09!169;UBERON:0006595!5.33e-09!169;UBERON:0001007!1.21e-08!155;UBERON:0001555!1.21e-08!155;UBERON:0007026!1.21e-08!155;UBERON:0000481!2.08e-08!347;UBERON:0005153!1.42e-07!37;UBERON:0001048!1.93e-07!168;UBERON:0005157!2.56e-07!51;UBERON:0000077!8.73e-07!130 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.86e-09,160;UBERON:0000925,4.86e-09,160;UBERON:0006595,4.86e-09,160;UBERON:0001004,1.57e-08,74;UBERON:0001007,2.47e-08,145;UBERON:0001555,2.47e-08,145;UBERON:0007026,2.47e-08,145;UBERON:0005157,1.75e-07,47;UBERON:0008947,2.23e-07,38;UBERON:0003258,2.23e-07,38;UBERON:0000065,2.42e-07,54;UBERON:0001048,4.18e-07,160;UBERON:0005911,5.87e-07,82 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.422863212287913,1.0007329835313,0,0,0,0,0,2.45733936501509,4.18680700783456,0,0.263766978228454,0,0,0,0,1.46062018077475,0,0,0.816002764977012,1.25381888591235,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,1.8072355126695,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66221330396589,2.1686349143074,2.50668955317945,4.34539556882471,0,0,0.378139268656271,0.665188192387692,0.351339142772504,0.0654895377488563,4.73583874780305,2.59549109949101,0,0,0,0,0,0,2.58391129576717,1.72046919021225,0.694281003215189,0,0.838998872419812,0.550236083880135,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0,1.62028389576352,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,2.61656431285521,1.49091585508596,1.64619665163954,0.264818361626438,0.573673241497627,0.709336764396714,2.24271040056923,3.20246987189115,3.20667812942308,0.933633106199299,1.48181739276657,0.163461903113459,0.454072282934794,0,8.66989297785048,0.312160076830321,1.71141546463335,0.597794722207204,1.40921398372518,0.485618833104395,0.280901613404497,0.61246251376468,0.122834317311768,1.23990937410919,1.18800285728205,0.494533858557114,0.910161361938026,8.62341770179486,0.841680569770331,0.875829639103749,0.554128230968366,0.438977620880838,0.30648779579902,0.901428353439581,0.453728732640084,0.358779271377724,0.640672166455702,0.423863802319124,0.300091096084402,0.309157587715317,1.28820270022815,0.930584281657949,0,0.389748020644795,0.252433774244115,1.10459878370759,0.484938170456436,0,0.806016785821122,0.508681776931463,0,1.09098448236334,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,3.07597680103594,1.68584690078102,1.44606617930089,2.97793726377464,1.52515610864684,0.949082476444386,1.48314438976181,0.588664395376038,0.38474715694639,0.738155454624648,0,0,1.47008711385542,0,3.9313088667105,0,0,0.491953754172454,0.686271241194102,0.219500570817251,4.49607013030478,0.703702806881416,2.96283024507295,0.977424915930974,0,0,0.463721619900307,3.05262605013136,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.425325291727159,2.7763142037883,2.61570544662566,0.766765358330422,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,1.12131084345361,1.74384027533312,1.0267360014933,0.129271715757778,3.57656445851882,0,1.86156681609409,1.04007436911366,0.257207374262142,0,0,0.857867961948885,0,0.823240336780769,0,0,0.791951872933429,0,0.871533458600294,0.199945982364114,0,0,0,3.11512312139057,4.59447743336456,0,0.868687840005475,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,3.95144636908534,2.67643483195743,5.20417969611984,1.05427273493442,0.300946099727719,2.27407504055985,0,1.99267679560631,0.737476674166813,0.0868836144680828,0.783204629850962,0.686286847621712,0,0,0,0,0,2.41912234663744,0.496215615637554,0.153461973288062,0.841980283299221,0.256278298511402,1.02341449813341,1.44768529029247,0,0,0.532685175939381,0,0,0,0.120859449591622,0.200506470303285,0.644566922551274,1.26295892981067,1.27463817604702,0.917870904715969,0.451199612907412,1.00119938235739,0.784349769176855,0,0.422206515571503,0,0,0.431831832204279,0,0.541892875087706,1.00337954770971,0.509752546090077,3.3243040357149,1.79099803777743,0,0,0,0.328014645699706,1.95227036798582,1.95777922130672,0.915694648183434,0.907604499126468,0.574265537996172,2.60024098414608,1.6068392984416,1.93341436584244,0.154048617114644,0.307007349452259,0.413509717453592,2.0409846524972,0,0.170453254832202,2.04773681987496,3.96683796866347,1.53752053892085,0,1.8208400553999,0.464845549297286,0,0,0.924100740528266,0.532306030317022,0,0.55597265731176,0.715624433709956,0.372158369359667,0.632758849437452,0.38126038784765,0.767693373934002,0.855877976067841,0,3.13979456079692,0,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,1.77449884830381,1.1312434556297,1.13008116620243,0,0.66343897524122,0.876901770507525,0,0,1.21746226177622,0.6196469961995,0.563391205064483,0.717056761020258,2.55447506634115,1.07001315444375,0,1.26664581178598,0.658589785919804,0.75894634753143,5.24902080367474,4.52243929809907,1.34060455107157,1.08890984861323,0.564862804660675,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33748280548102,0,0.63337622438398,0,0,0,0.306806047506464,0,2.17727711363265,3.59473404589307,4.47552936689023,0,0,0,1.11136990144637,0,0,0,1.5625665665114,0.787139999965761,0,0.682760689712998,3.0510438035132,0,0.344743373241465,0.291604613383254,0.520874984799877,0,0,0,0,0,0,6.97206166521537,1.39423744278603,0,1.59518878185802,0,0.538545866458633,0.977826347298073,0,0.183195186803725,0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| ||
|short_description=p7@AJUBA | |||
}} | }} |
Latest revision as of 08:27, 19 September 2015
Short description: | p7@AJUBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_AJUBA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000553592_5end |
EntrezGene: | AJUBA |
HGNC: | 20250 |
UniProt: | G3V481 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.03e-16 | 253 |
respiratory epithelial cell | 3.32e-08 | 13 |
endo-epithelial cell | 2.81e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.86e-09 | 160 |
endoderm | 4.86e-09 | 160 |
presumptive endoderm | 4.86e-09 | 160 |
respiratory system | 1.57e-08 | 74 |
digestive system | 2.47e-08 | 145 |
digestive tract | 2.47e-08 | 145 |
primitive gut | 2.47e-08 | 145 |
epithelial fold | 1.75e-07 | 47 |
respiratory primordium | 2.23e-07 | 38 |
endoderm of foregut | 2.23e-07 | 38 |
respiratory tract | 2.42e-07 | 54 |
primordium | 4.18e-07 | 160 |
endo-epithelium | 5.87e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.90e-10 | 106 |
cell type cancer | 1.62e-07 | 143 |