FFCP PHASE1:Hg19::chr14:23284630..23284650,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:23284630..23284650,- to FFCP PHASE1:Hg19::chr14:23284630..23284650,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9056 | |EntrezGene=9056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11065 | |HGNC=11065 | ||
|TSSclassifier=strong | |||
|UniProt=B4DVT0 | |UniProt=B4DVT0 | ||
|association_with_transcript=0bp_to_ENST00000404278_5end | |||
|cluster_id=chr14:23284630..23284650,- | |||
|coexpression_cluster_id=C2288 | |||
|description=CAGE_peak_1_at_SLC7A7_5end | |||
|id=chr14:23284630..23284650,- | |||
|ontology_enrichment_celltype=CL:0002194!1.18e-32!63;CL:0000576!1.18e-32!63;CL:0000040!1.18e-32!63;CL:0000559!1.18e-32!63;CL:0002009!1.91e-30!65;CL:0002057!9.69e-29!42;CL:0000766!2.01e-28!76;CL:0000860!3.56e-26!45;CL:0000839!1.46e-25!70;CL:0000557!1.10e-24!71;CL:0002087!1.66e-20!119;CL:0000738!6.45e-17!140;CL:0002031!2.89e-15!124;CL:0000763!5.49e-11!112;CL:0000049!5.49e-11!112;CL:0000037!5.45e-09!172;CL:0000566!5.45e-09!172;CL:0000988!4.05e-08!182;CL:0002032!4.46e-08!165;CL:0000837!4.46e-08!165;CL:0002393!3.76e-07!9;CL:0002397!3.76e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.96e-26;33!CL:0002057;8.96e-26;33!CL:0000473;3.67e-25;39!CL:0000234;3.67e-25;39!CL:0000576;5.95e-25;48!CL:0000766;8.83e-18;69!CL:0002087;1.34e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.34e-43,59;CL:0000576,3.34e-43,59;CL:0000040,3.34e-43,59;CL:0000559,3.34e-43,59;CL:0002009,7.62e-41,61;CL:0000473,9.08e-40,48;CL:0000234,9.08e-40,48;CL:0000766,3.06e-39,72;CL:0000839,1.32e-35,66;CL:0000860,1.99e-35,42;CL:0002057,1.99e-35,42;CL:0000557,1.17e-34,67;CL:0002087,1.10e-23,115;CL:0000738,1.79e-21,136;CL:0002031,1.35e-18,120;CL:0000763,4.02e-18,108;CL:0000049,4.02e-18,108;CL:0000037,1.33e-12,168;CL:0000988,8.87e-12,177;CL:0002032,1.57e-11,161;CL:0000837,1.57e-11,161;CL:0002393,1.59e-08,9;CL:0002397,1.59e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.79e-23!102;UBERON:0003061!3.79e-23!102;UBERON:0002371!1.17e-19!80;UBERON:0002193!1.25e-19!112;UBERON:0003081!1.10e-18!216;UBERON:0002405!1.07e-17!115;UBERON:0001474!3.03e-16!86;UBERON:0002204!2.41e-14!167;UBERON:0004765!8.14e-12!101;UBERON:0001434!8.14e-12!101;UBERON:0000926!3.38e-11!448;UBERON:0004120!3.38e-11!448;UBERON:0006603!3.38e-11!448;UBERON:0007023!8.98e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.78e-32,98;UBERON:0003061,1.78e-32,98;UBERON:0002193,5.54e-29,108;UBERON:0002371,2.48e-27,76;UBERON:0003081,6.89e-26,203;UBERON:0002405,1.27e-23,93;UBERON:0001474,2.01e-23,82;UBERON:0004765,4.04e-19,90;UBERON:0000926,1.08e-16,315;UBERON:0004120,1.08e-16,315;UBERON:0006603,1.08e-16,315;UBERON:0001434,7.33e-15,100;UBERON:0002204,1.58e-13,167;UBERON:0005423,8.96e-07,581;UBERON:0000922,9.57e-07,592 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0.893922188854576,0.872338524100369,0,0,0,3.44027511102112,3.48900583986214,4.80571018686379,1.58260186937072,0,0,4.70627602516243,3.61616716814386,3.65155045193687,3.41552959153355,0,0,0,0,0,0,2.36881557818649,2.79142004129816,3.06972047123349,134.923946959174,60.6450448993596,117.19580535027,0,0,0,0.387336002901508,0,0.587200878669695,85.869288322441,90.2450013615638,111.326576677232,123.601341780438,75.4672241824222,127.499905978922,109.484873801012,131.500828403706,97.0336244751265,108.544360234955,110.192993989849,113.042825376713,115.364649321182,118.346246416445,130.538190898499,138.587763656121,144.588569122777,127.300897398681,133.275576396164,111.891521523717,120.451787662565,118.454466347539,142.813417048862,110.605322763234,84.1120815476126,130.050304769304,105.703738132108,114.922858496919,114.044430162919,99.651559839292,99.2432227764136,121.505519991907,147.905603244184,108.971910474006,146.574499123051,135.762364212139,117.880449762064,103.963502682906,162.6951089145,120.640949851336,91.7580815261604,105.11453369989,102.319575003108,96.8724217959569,121.471662253482,0,2.18455444504853,0.889509253863555,8.10787422876364,0.400395987036012,0.574752439954483,3.30522436392431,0.954053754535364,0,2.93618594685469,1.52909291250092,1.32171328579026,19.0572911413722,1.31692042387539,0.590129310341499,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,1.91139248594458,0.651083453856419,0,7.82990619204418,3.4556385011693,4.99722906209383,7.57687206540854,1.64225599384209,0.201606743224732,0,0.289648807765598,2.43806866313962,2.68280343881454,11.3797680040742,0,0,0.434539556882471,2.3858578411533,0.973269740605272,0,0.221729397462564,0.351339142772504,42.830157687752,0,0,10.0609692032952,9.5771355514597,24.9960965775466,6.20075623193889,4.0039643754609,1.11437250398869,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,2.63560834872127,0,0,0.496971951695318,6.96467814155189,1.19168262731897,5.16305917347865,2.83734705758686,4.48542080113846,11.7423895302675,4.68668341992604,0.933633106199299,1.75123873690594,2.28846664358842,1.36221684880438,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,1.43723628363248,0,0,0,0.438977620880838,0.30648779579902,0.300476117813194,8.16711718752151,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.484938170456436,0,0,0.169560592310488,0,0,0,0.731842236777572,0.662648841607426,3.83440011469411,2.17688215532278,6.56034212276634,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,1.4763109092493,0,22.2249966118956,19.1111324801205,1.26755034821831,3.9313088667105,2.95394953340702,0,232.202171969398,0.171567810298526,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,63.5239875705485,82.1354970638724,78.1799913638711,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.784917590417525,0.87192013766656,0.22001485746285,12.5393564285044,0,0,0.26593811658487,0,0,0,0,4.28933980974443,3.7983512377401,2.46972101034231,0,4.97548728239564,0.791951872933429,1.20575750823834,0,23.1937339542372,71.7580305783024,69.3114786176335,59.0335030552489,0.239624855491583,0,0,0,0,0.537182889719687,0,3.54655368363469,0.431255149719035,5.64709359630893,0.254094624222463,0,0,3.18280904135263,0,6.74106321552464,0,5.8018171881045,0.24538298343828,0,0,0.623912584592421,0,0.157702415033935,0.35142424497814,3.91229929646035,2.27407504055985,2.0694614258501,0,0.368738337083406,0.260650843404249,0.391602314925481,5.14715135716284,51.8987745568447,45.9471247743654,40.9833821965226,2.12189300012382,8.32177197552485,14.8171243731543,0.496215615637554,0,0.841980283299221,0.640695746278505,0.511707249066704,1.12597744800525,1.48418066444991,0.154209693802656,0,0,0,0,228.424359728166,0,0,0.459257792658427,0.910455840033585,2.22911505431021,0.902399225814824,0.770153371044148,0,0,0.422206515571503,0,0,0,0,1.08378575017541,2.00675909541941,3.05851527654046,0.831076008928724,0.223874754722178,0,0,0,14.7606590564868,1.62689197332152,17.3108899568173,0,0.082509499920588,0,0,0,17.0140464194135,0.616194468458578,0.15350367472613,2.34322173223702,1.50388342815583,0.870100163485371,2.38634556765083,21.01156041263,0,0,0,0.10115778085555,2.32422774648643,0.62962469366128,0,2.7723022215848,1.59691809095107,0,0,1.00187420719394,1.116475108079,2.21465597303108,5.14701523594327,0.767693373934002,0.42793898803392,0,3.13979456079692,2.15846949099978,2.19629623788844,0.824686816419805,1.01091240786658,15.8510321173008,0.421258456238981,1.95053495635836,3.41198885483798,3.16950440270266,0.682499557039929,1.69686518344455,0,0,1.32687795048244,0,0.578775534266688,0.655894752046633,0.202910376962704,2.478587984798,0.563391205064483,0.430234056612155,4.81420300964294,0.35667105148125,0.354761064070598,0.633322905892992,0.329294892959902,0,0,0,0,0,16.7575965382667,0,0,0,0,45.1628372216631,23.7037534214136,22.2162402997923,23.823177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| ||
|short_description=p1@SLC7A7 | |||
}} | }} |
Latest revision as of 07:22, 19 September 2015
Short description: | p1@SLC7A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC7A7_5end |
Coexpression cluster: | C2288_mesothelioma_colon_small_Intestinal_Prostate_CD14_Macrophage |
Association with transcript: | 0bp_to_ENST00000404278_5end |
EntrezGene: | SLC7A7 |
HGNC: | 11065 |
UniProt: | B4DVT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.34e-43 | 59 |
monocyte | 3.34e-43 | 59 |
monoblast | 3.34e-43 | 59 |
promonocyte | 3.34e-43 | 59 |
macrophage dendritic cell progenitor | 7.62e-41 | 61 |
defensive cell | 9.08e-40 | 48 |
phagocyte | 9.08e-40 | 48 |
myeloid leukocyte | 3.06e-39 | 72 |
myeloid lineage restricted progenitor cell | 1.32e-35 | 66 |
classical monocyte | 1.99e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.99e-35 | 42 |
granulocyte monocyte progenitor cell | 1.17e-34 | 67 |
nongranular leukocyte | 1.10e-23 | 115 |
leukocyte | 1.79e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 1.35e-18 | 120 |
myeloid cell | 4.02e-18 | 108 |
common myeloid progenitor | 4.02e-18 | 108 |
hematopoietic stem cell | 1.33e-12 | 168 |
hematopoietic cell | 8.87e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.57e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-11 | 161 |
intermediate monocyte | 1.59e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.59e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.78e-32 | 98 |
blood island | 1.78e-32 | 98 |
hemolymphoid system | 5.54e-29 | 108 |
bone marrow | 2.48e-27 | 76 |
lateral plate mesoderm | 6.89e-26 | 203 |
immune system | 1.27e-23 | 93 |
bone element | 2.01e-23 | 82 |
skeletal element | 4.04e-19 | 90 |
mesoderm | 1.08e-16 | 315 |
mesoderm-derived structure | 1.08e-16 | 315 |
presumptive mesoderm | 1.08e-16 | 315 |
skeletal system | 7.33e-15 | 100 |
musculoskeletal system | 1.58e-13 | 167 |
developing anatomical structure | 8.96e-07 | 581 |
embryo | 9.57e-07 | 592 |