FFCP PHASE1:Hg19::chr13:77338767..77338773,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:77338767..77338773,+ to FFCP PHASE1:Hg19::chr13:77338767..77338773,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:77338767..77338773,+ | |||
|coexpression_cluster_id=C433 | |||
|description=CAGE_peak_at_chr13:77338767..77338773,+ | |||
|id=chr13:77338767..77338773,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.81e-17!70;CL:0002194!3.40e-17!63;CL:0000576!3.40e-17!63;CL:0000040!3.40e-17!63;CL:0000559!3.40e-17!63;CL:0000557!4.10e-17!71;CL:0000766!6.93e-17!76;CL:0002009!1.91e-16!65;CL:0002057!4.32e-11!42;CL:0000763!8.28e-11!112;CL:0000049!8.28e-11!112;CL:0000860!4.65e-10!45;CL:0002619!1.57e-08!3;CL:0000115!1.89e-08!35;CL:0002087!2.51e-07!119;CL:0000738!4.74e-07!140;CL:0005020!8.86e-07!6;CL:0002138!8.86e-07!6;CL:0005022!8.86e-07!6;CL:0002031!9.59e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0002619;2.51e-53;3!CL:0000235;2.22e-27;6!CL:0000115;4.11e-10;36!CL:0002138;7.25e-08;6!CL:0002078;6.89e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.19e-53,3;CL:0000235,2.38e-27,6;CL:0002194,2.88e-11,59;CL:0000576,2.88e-11,59;CL:0000040,2.88e-11,59;CL:0000559,2.88e-11,59;CL:0002009,6.33e-11,61;CL:0000115,1.05e-10,36;CL:0000839,3.69e-10,66;CL:0000557,5.09e-10,67;CL:0000766,2.24e-09,72;CL:0002078,1.01e-08,45;CL:0005020,7.25e-08,6;CL:0002138,7.25e-08,6;CL:0005022,7.25e-08,6;CL:0000213,6.27e-07,58;CL:0000215,6.27e-07,58 | |||
|ontology_enrichment_development_v019=CL:0005022;7.25e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.52e-20!112;UBERON:0002405!7.11e-18!115;UBERON:0002390!4.31e-16!102;UBERON:0003061!4.31e-16!102;UBERON:0002371!2.51e-14!80;UBERON:0003081!4.95e-14!216;UBERON:0001474!8.36e-13!86;UBERON:0007023!1.05e-11!115;UBERON:0004765!8.01e-10!101;UBERON:0001434!8.01e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,3.61e-11,93;UBERON:0002193,1.03e-09,108;UBERON:0002371,6.37e-09,76;UBERON:0001474,2.54e-08,82;UBERON:0004765,1.22e-07,90;UBERON:0002390,4.54e-07,98;UBERON:0003061,4.54e-07,98;UBERON:0001434,6.11e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,2.91090116511902,0.971680998056939,3.8636335145128,0,0.755751887377619,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0.750884464207532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,1.00416183829401,0,0.760272105718513,0.488124115096339,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0,0.761016608938393,0,0,4.92434012174795,0.468008530278475,2.82399208348584,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0.171488009437418,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.939839179798536,0.322289439867886,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,2.91090116511902,0.971680998056939,3.8636335145128,0,0.755751887377619,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0.750884464207532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,1.00416183829401,0,0.760272105718513,0.488124115096339,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0,0.761016608938393,0,0,4.92434012174795,0.468008530278475,2.82399208348584,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0.171488009437418,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.939839179798536,0.322289439867886,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr13:77338767..77338773,+ | |||
}} | }} |
Latest revision as of 17:09, 24 July 2015
Short description: | p@chr13:77338767..77338773, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:77338767..77338773, + |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.19e-53 | 3 |
macrophage | 2.38e-27 | 6 |
monopoietic cell | 2.88e-11 | 59 |
monocyte | 2.88e-11 | 59 |
monoblast | 2.88e-11 | 59 |
promonocyte | 2.88e-11 | 59 |
macrophage dendritic cell progenitor | 6.33e-11 | 61 |
endothelial cell | 1.05e-10 | 36 |
myeloid lineage restricted progenitor cell | 3.69e-10 | 66 |
granulocyte monocyte progenitor cell | 5.09e-10 | 67 |
myeloid leukocyte | 2.24e-09 | 72 |
meso-epithelial cell | 1.01e-08 | 45 |
lymphangioblast | 7.25e-08 | 6 |
endothelial cell of lymphatic vessel | 7.25e-08 | 6 |
vascular lymphangioblast | 7.25e-08 | 6 |
lining cell | 6.27e-07 | 58 |
barrier cell | 6.27e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
immune system | 3.61e-11 | 93 |
hemolymphoid system | 1.03e-09 | 108 |
bone marrow | 6.37e-09 | 76 |
bone element | 2.54e-08 | 82 |
skeletal element | 1.22e-07 | 90 |
hematopoietic system | 4.54e-07 | 98 |
blood island | 4.54e-07 | 98 |
skeletal system | 6.11e-07 | 100 |