FFCP PHASE1:Hg19::chr13:76209919..76209958,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:76209919..76209958,- to FFCP PHASE1:Hg19::chr13:76209919..76209958,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:76209919..76209958,- | |||
|description=CAGE_peak_at_chr13:76209919..76209958,- | |||
|id=chr13:76209919..76209958,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;2.05e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,1.71e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.76e-09;1!UBERON:0006298;2.05e-08;1!UBERON:0007123;5.43e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.05e-08;1!DOID:178;2.05e-08;1!DOID:326;2.05e-08;1!DOID:3978;2.05e-08;1!DOID:3394;2.05e-08;1!DOID:5844;2.05e-08;1!DOID:1357;2.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,1.18e-08,1;DOID:326,1.18e-08,1;DOID:3978,1.18e-08,1;DOID:3394,1.18e-08,1;DOID:5844,1.18e-08,1;DOID:0050619,1.37e-08,1;DOID:1357,1.37e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003101!2.24e-08!22;UBERON:0000079!2.24e-08!22;UBERON:0003937!2.57e-07!12;UBERON:0005399!2.57e-07!12;UBERON:0000161!7.83e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.08e-10;3!UBERON:0004054;1.08e-10;3!UBERON:0001301;7.00e-09;1!UBERON:0001000;2.05e-08;1!UBERON:0001736;2.05e-08;1!UBERON:0001764;2.05e-08;1!UBERON:0001825;2.05e-08;1!UBERON:0005352;2.05e-08;1!UBERON:0005904;3.11e-08;4!UBERON:0002046;5.43e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.16e-10,3;UBERON:0004054,1.16e-10,3;UBERON:0001301,6.50e-09,1;UBERON:0001736,1.02e-08,1;UBERON:0006298,1.02e-08,1;UBERON:0001764,1.37e-08,1;UBERON:0001825,1.37e-08,1;UBERON:0001000,2.46e-08,1;UBERON:0005352,2.46e-08,1;UBERON:0005904,3.29e-08,4;UBERON:0002046,5.44e-07,5;UBERON:0004117,5.44e-07,5;UBERON:0007689,5.44e-07,5;UBERON:0007123,5.44e-07,5;UBERON:0003091,5.44e-07,5 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0.724232594804119,0,0.486634870302636,0.189069634328136,0,0,0.261958150995425,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0,0,0,0.427114777637135,0.423863802319124,0,0.103052529238439,0.257640540045629,0.37223371266318,0,0.0974370051611986,0,0.644349290496095,0.323292113637624,0,0.302256294682921,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370353780634118,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,2.08014873822732,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.831883446123229,1.42743191037729,1.10391690523754,0.819989904948992,1.50473049863859,0,1.03473071292505,0,0.553107505625109,0.260650843404249,0,0,0,0,0,0,0,0.604780586659361,0.496215615637554,0,1.12264037773229,0.384417447767103,0.511707249066704,0.321707842287215,1.48418066444991,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0.48763373908959,0,0,0.545999645631943,0.424216295861138,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.633322905892992,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0.269272933229316,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,3.10142335502381,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,3.4945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,1.76349404553374,0,0,0,0.229073192331831,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,1.79711100449092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.788057072991982,0.104909176269996,0,0,3.45447355175002,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,1.72759505875258,0,0.122026264901963,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.680117776536817,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0.526472298444801,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0.443511850813194,0,0.342976018874837,0,0,0.472775363535873,0.111231401892069,0.313972371402056,0,0.560544326627578,0,0,0,0,0,0.348724276104376,0,0.801711364730253,0,0,0,1.72090943528111,0,0,0.423387050190929,1.8328549483524,0,0,0,0,0,0,0,0,0,0.467878926924211,0.198950775161368,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,1.05868461514708,0,0,1.83491713361816,0,0,0.0679914901909147,0,0,0.371995018166751,1.38652688589425,0.865253124247578,0,0,0,0.101988829741982,0,0,0.752122617877125,0.682008283964155,0,0,0,0.852935927603924,2.3806443146374,0.0645889098360061,0.0620747142958579,0,5.21906697880952,5.05292972395548,0.217716747896961,0.342233301085281,0.26940821205835,1.00411087549747,0.332660356546013,0.325613074443898,0.320182037633146,0,0,2.34640942403454,0.244482888365733,0,0,0.402547587182052,0 | |phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0.724232594804119,0,0.486634870302636,0.189069634328136,0,0,0.261958150995425,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0,0,0,0.427114777637135,0.423863802319124,0,0.103052529238439,0.257640540045629,0.37223371266318,0,0.0974370051611986,0,0.644349290496095,0.323292113637624,0,0.302256294682921,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370353780634118,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,2.08014873822732,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.831883446123229,1.42743191037729,1.10391690523754,0.819989904948992,1.50473049863859,0,1.03473071292505,0,0.553107505625109,0.260650843404249,0,0,0,0,0,0,0,0.604780586659361,0.496215615637554,0,1.12264037773229,0.384417447767103,0.511707249066704,0.321707842287215,1.48418066444991,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0.48763373908959,0,0,0.545999645631943,0.424216295861138,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.633322905892992,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0.269272933229316,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,3.10142335502381,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,3.4945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,1.76349404553374,0,0,0,0.229073192331831,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,1.79711100449092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.788057072991982,0.104909176269996,0,0,3.45447355175002,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,1.72759505875258,0,0.122026264901963,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.680117776536817,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0.526472298444801,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0.443511850813194,0,0.342976018874837,0,0,0.472775363535873,0.111231401892069,0.313972371402056,0,0.560544326627578,0,0,0,0,0,0.348724276104376,0,0.801711364730253,0,0,0,1.72090943528111,0,0,0.423387050190929,1.8328549483524,0,0,0,0,0,0,0,0,0,0.467878926924211,0.198950775161368,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,1.05868461514708,0,0,1.83491713361816,0,0,0.0679914901909147,0,0,0.371995018166751,1.38652688589425,0.865253124247578,0,0,0,0.101988829741982,0,0,0.752122617877125,0.682008283964155,0,0,0,0.852935927603924,2.3806443146374,0.0645889098360061,0.0620747142958579,0,5.21906697880952,5.05292972395548,0.217716747896961,0.342233301085281,0.26940821205835,1.00411087549747,0.332660356546013,0.325613074443898,0.320182037633146,0,0,2.34640942403454,0.244482888365733,0,0,0.402547587182052,0 | ||
|short_description=p@chr13:76209919..76209958,- | |||
}} | }} |
Latest revision as of 17:06, 24 July 2015
Short description: | p@chr13:76209919..76209958, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:76209919..76209958, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 1.71e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.16e-10 | 3 |
internal male genitalia | 1.16e-10 | 3 |
epididymis | 6.50e-09 | 1 |
submandibular gland | 1.02e-08 | 1 |
submandibular gland primordium | 1.02e-08 | 1 |
maxillary sinus | 1.37e-08 | 1 |
paranasal sinus | 1.37e-08 | 1 |
vas deferens | 2.46e-08 | 1 |
spermatic cord | 2.46e-08 | 1 |
duct of male reproductive system | 3.29e-08 | 4 |
thyroid gland | 5.44e-07 | 5 |
pharyngeal pouch | 5.44e-07 | 5 |
thyroid diverticulum | 5.44e-07 | 5 |
pharyngeal pouch 2 | 5.44e-07 | 5 |
thyroid primordium | 5.44e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.18e-08 | 1 |
ischemia | 1.18e-08 | 1 |
extrinsic cardiomyopathy | 1.18e-08 | 1 |
myocardial ischemia | 1.18e-08 | 1 |
myocardial infarction | 1.18e-08 | 1 |
paranasal sinus cancer | 1.37e-08 | 1 |
maxillary sinus cancer | 1.37e-08 | 1 |