FFCP PHASE1:Hg19::chr13:50699661..50699695,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:50699661..50699695,- to FFCP PHASE1:Hg19::chr13:50699661..50699695,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8847 | |EntrezGene=8847 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=13748 | |HGNC=13748 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_002612,uc001vdn.1,uc001vdo.1_5end | |||
|cluster_id=chr13:50699661..50699695,- | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_1_at_DLEU2_5end | |||
|id=chr13:50699661..50699695,- | |||
|ontology_enrichment_celltype=CL:0000037!9.73e-34!172;CL:0000566!9.73e-34!172;CL:0000988!1.47e-32!182;CL:0000738!3.95e-32!140;CL:0002032!4.04e-32!165;CL:0000837!4.04e-32!165;CL:0000763!7.91e-32!112;CL:0000049!7.91e-32!112;CL:0000766!1.47e-31!76;CL:0000557!1.10e-28!71;CL:0000839!1.09e-27!70;CL:0002031!4.17e-27!124;CL:0002009!3.79e-26!65;CL:0002194!5.67e-25!63;CL:0000576!5.67e-25!63;CL:0000040!5.67e-25!63;CL:0000559!5.67e-25!63;CL:0002087!2.04e-24!119;CL:0002057!5.74e-24!42;CL:0000860!5.83e-21!45;CL:0002320!3.53e-10!365;CL:0000134!7.35e-10!358;CL:0000219!2.98e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.18e-17;33!CL:0002057;2.18e-17;33!CL:0000576;2.29e-17;48!CL:0000473;1.44e-16;39!CL:0000234;1.44e-16;39!CL:0000766;1.70e-15;69!CL:0000763;6.56e-10;100!CL:0000738;1.14e-08;136!CL:0002087;4.14e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.04e-36,168;CL:0000988,1.65e-35,177;CL:0000766,4.75e-35,72;CL:0000738,1.09e-34,136;CL:0000763,2.00e-34,108;CL:0000049,2.00e-34,108;CL:0002032,2.15e-34,161;CL:0000837,2.15e-34,161;CL:0000557,4.14e-32,67;CL:0000839,4.66e-31,66;CL:0002031,1.40e-29,120;CL:0002009,1.44e-29,61;CL:0002194,2.35e-28,59;CL:0000576,2.35e-28,59;CL:0000040,2.35e-28,59;CL:0000559,2.35e-28,59;CL:0002087,8.76e-27,115;CL:0000473,3.28e-26,48;CL:0000234,3.28e-26,48;CL:0000860,5.36e-24,42;CL:0002057,5.36e-24,42;CL:0002320,9.07e-11,361;CL:0000134,1.92e-10,354;CL:0000219,8.55e-09,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.70e-17;42!CL:0000049;1.07e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.70e-35!102;UBERON:0003061!2.70e-35!102;UBERON:0002193!1.12e-32!112;UBERON:0002371!1.31e-26!80;UBERON:0001474!1.79e-24!86;UBERON:0002405!3.54e-21!115;UBERON:0004765!4.32e-19!101;UBERON:0001434!4.32e-19!101;UBERON:0007023!7.24e-16!115;UBERON:0002384!9.21e-11!375;UBERON:0000178!1.32e-08!15;UBERON:0000179!1.32e-08!15;UBERON:0000463!1.32e-08!15;UBERON:0002204!4.63e-08!167;UBERON:0001049!4.32e-07!57;UBERON:0005068!4.32e-07!57;UBERON:0006241!4.32e-07!57;UBERON:0007135!4.32e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.27e-08;15!UBERON:0000179;1.27e-08;15!UBERON:0000463;1.27e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.35e-38,98;UBERON:0003061,2.35e-38,98;UBERON:0002193,2.72e-35,108;UBERON:0002371,1.46e-29,76;UBERON:0002405,1.23e-27,93;UBERON:0001474,4.64e-27,82;UBERON:0004765,6.85e-23,90;UBERON:0001434,2.05e-20,100;UBERON:0007023,1.09e-15,114;UBERON:0002384,2.29e-11,371;UBERON:0000178,1.29e-08,15;UBERON:0000179,1.29e-08,15;UBERON:0000463,1.29e-08,15;UBERON:0002204,1.45e-08,167;UBERON:0003081,2.78e-08,203;UBERON:0001049,8.86e-07,56;UBERON:0005068,8.86e-07,56;UBERON:0006241,8.86e-07,56;UBERON:0007135,8.86e-07,56 | |||
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| ||
|short_description=p1@DLEU2 | |||
}} | }} |
Latest revision as of 17:42, 17 September 2015
Short description: | p1@DLEU2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DLEU2_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | 0bp_to_NR_002612, uc001vdn.1, uc001vdo.1_5end |
EntrezGene: | DLEU2 |
HGNC: | 13748 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.04e-36 | 168 |
hematopoietic cell | 1.65e-35 | 177 |
myeloid leukocyte | 4.75e-35 | 72 |
leukocyte | 1.09e-34 | 136 |
myeloid cell | 2.00e-34 | 108 |
common myeloid progenitor | 2.00e-34 | 108 |
hematopoietic oligopotent progenitor cell | 2.15e-34 | 161 |
hematopoietic multipotent progenitor cell | 2.15e-34 | 161 |
granulocyte monocyte progenitor cell | 4.14e-32 | 67 |
myeloid lineage restricted progenitor cell | 4.66e-31 | 66 |
hematopoietic lineage restricted progenitor cell | 1.40e-29 | 120 |
macrophage dendritic cell progenitor | 1.44e-29 | 61 |
monopoietic cell | 2.35e-28 | 59 |
monocyte | 2.35e-28 | 59 |
monoblast | 2.35e-28 | 59 |
promonocyte | 2.35e-28 | 59 |
nongranular leukocyte | 8.76e-27 | 115 |
defensive cell | 3.28e-26 | 48 |
phagocyte | 3.28e-26 | 48 |
classical monocyte | 5.36e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.36e-24 | 42 |
connective tissue cell | 9.07e-11 | 361 |
mesenchymal cell | 1.92e-10 | 354 |
motile cell | 8.55e-09 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.35e-38 | 98 |
blood island | 2.35e-38 | 98 |
hemolymphoid system | 2.72e-35 | 108 |
bone marrow | 1.46e-29 | 76 |
immune system | 1.23e-27 | 93 |
bone element | 4.64e-27 | 82 |
skeletal element | 6.85e-23 | 90 |
skeletal system | 2.05e-20 | 100 |
adult organism | 1.09e-15 | 114 |
connective tissue | 2.29e-11 | 371 |
blood | 1.29e-08 | 15 |
haemolymphatic fluid | 1.29e-08 | 15 |
organism substance | 1.29e-08 | 15 |
musculoskeletal system | 1.45e-08 | 167 |
lateral plate mesoderm | 2.78e-08 | 203 |
neural tube | 8.86e-07 | 56 |
neural rod | 8.86e-07 | 56 |
future spinal cord | 8.86e-07 | 56 |
neural keel | 8.86e-07 | 56 |