FFCP PHASE1:Hg19::chr13:50510579..50510591,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:50510579..50510591,- to FFCP PHASE1:Hg19::chr13:50510579..50510591,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57213 | |EntrezGene=57213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14297 | |HGNC=14297 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000495454_5end | |||
|cluster_id=chr13:50510579..50510591,- | |||
|description=CAGE_peak_5_at_SPRYD7_5end | |||
|id=chr13:50510579..50510591,- | |||
|ontology_enrichment_celltype=CL:0000055!2.45e-13!180;CL:0000680!8.06e-10!57;CL:0000056!8.06e-10!57;CL:0000355!8.06e-10!57;CL:0000222!5.05e-09!119;CL:0000183!8.96e-09!59;CL:0000220!1.18e-08!246;CL:0002321!1.57e-08!248;CL:0000187!1.79e-08!54;CL:0000192!3.37e-08!42;CL:0000514!3.37e-08!42;CL:0000393!1.30e-07!60;CL:0000211!1.30e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.81e-10;43!CL:0000515;2.56e-07;3!CL:0000359;3.19e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.10e-13,43;CL:0000514,2.10e-13,43;CL:0000680,2.73e-12,58;CL:0000056,2.73e-12,58;CL:0000355,2.73e-12,58;CL:0000187,2.19e-09,55;CL:0000359,1.63e-08,32;CL:0000393,5.37e-08,61;CL:0000211,5.37e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.81e-10;43!CL:0000355;2.05e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.22e-16!312;UBERON:0000483!5.30e-16!309;UBERON:0000475!6.03e-15!365;UBERON:0000914!2.42e-11!83;UBERON:0002329!2.42e-11!83;UBERON:0003077!2.42e-11!83;UBERON:0003059!2.42e-11!83;UBERON:0007282!2.42e-11!83;UBERON:0009618!2.42e-11!83;UBERON:0007285!2.42e-11!83;UBERON:0005256!2.62e-11!143;UBERON:0000486!2.77e-11!82;UBERON:0000481!4.59e-11!347;UBERON:0004290!2.79e-10!70;UBERON:0002100!1.24e-09!216;UBERON:0004111!4.64e-09!241;UBERON:0001134!5.60e-09!61;UBERON:0002036!5.60e-09!61;UBERON:0003082!5.60e-09!61;UBERON:0000477!8.80e-09!286;UBERON:0002385!1.41e-08!63;UBERON:0001015!1.41e-08!63;UBERON:0000383!1.41e-08!63;UBERON:0000025!2.81e-07!194;UBERON:0003104!3.14e-07!238;UBERON:0009142!3.14e-07!238;UBERON:0000490!6.80e-07!138;UBERON:0000064!7.38e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;2.69e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,7.53e-14,83;UBERON:0007524,7.31e-13,73;UBERON:0001134,2.76e-12,62;UBERON:0002036,2.76e-12,62;UBERON:0003082,2.76e-12,62;UBERON:0002329,3.43e-12,71;UBERON:0003059,3.43e-12,71;UBERON:0007282,3.43e-12,71;UBERON:0004290,3.43e-12,71;UBERON:0009618,3.43e-12,71;UBERON:0003077,6.27e-12,72;UBERON:0007285,6.27e-12,72;UBERON:0002385,1.04e-11,64;UBERON:0001015,1.04e-11,64;UBERON:0000383,1.04e-11,64;UBERON:0007503,1.27e-11,78;UBERON:0005256,4.60e-11,122;UBERON:0003104,3.34e-09,160;UBERON:0009142,3.34e-09,160;UBERON:0002100,3.35e-09,199;UBERON:0000483,4.33e-09,306;UBERON:0000490,4.59e-09,148;UBERON:0000119,7.22e-09,309;UBERON:0003513,1.90e-07,7;UBERON:0002049,9.72e-07,78;UBERON:0007798,9.72e-07,78 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.422863212287913,2.00146596706261,0.446961094427288,2.61701557230111,0,1.26343974685366,0.522371256399677,0.737201809504527,0.697801167972428,0.873765488520689,0.527533956456907,0.495065411840187,0.331397375727916,0.672325146451775,0,0.730310090387373,0.487932798790507,0.492484232307152,0.408001382488506,0.626909442956176,0,0.273748850145768,0.376627918784408,0.152826811495903,0.656804715599566,0.157421562627358,0,0,0,1.83884244895785,0,0.369754010166788,0.0774672005803016,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0.853460445133014,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.511450247374121,1.0843174571537,1.00267582127178,1.01392563272577,0,3.89307896242109,0.378139268656271,0.443458794925128,0.175669571386252,0.654895377488563,0.728590576585084,1.11235332835329,0,0.174129737299267,0.132957960518865,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0.805658634218294,0.760272105718513,0.732186172644509,0.735326160691737,0,0,0.673588117878509,0.563057402416611,0,0,0.366403487860815,0,0,3.05265836499774,0.993943903390637,0.379891534993739,1.19168262731897,0,0.709336764396714,0,0,0.49333509683432,0.933633106199299,0.269421344139376,0.490385709340376,0.302714855289863,0.576175924479999,0.468642863667593,0.624320153660641,0.570471821544449,0.597794722207204,1.29177948508141,0.323745888736263,0.421352420106746,1.42907919878425,0.982674538494144,0.723280468230358,0,1.23633464639278,1.82032272387605,2.15585442544872,0.336672227908132,0.500474079487857,1.6623846929051,1.75591048352335,1.5324389789951,0,1.36118619792025,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.92747276314595,0,0,0.168776332241266,1.16924406193438,0.504867548488229,0.460249493211497,0,0.710019185033229,0.201504196455281,0.169560592310488,0.773043412653187,1.36373060295417,2.00763216772303,0.121973706129595,0.132529768321485,0.464775771478074,0.310983165046111,0,0,0,0.643240938192885,1.38134921352481,3.25057549622385,0,0.354920400119532,0,0,0.330881918197182,0.217879444092406,0,0.674156540800822,0.196221465125346,0,1.4763109092493,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0.122988438543114,1.20097467208968,0.548751427043128,1.1240175325762,0.402115889646523,0,0.325808305310325,3.11980435583874,1.44331342025273,0.34779121492523,0.352226082707465,0.288732895522148,0,0.380508304469197,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.567100388969546,1.52249488594842,0.871901815541886,0.766765358330422,0,0.088048434013226,0.207328115540772,0,0,0.253991577168676,0.763976851116555,0,0,0.102827492703324,0,0.857479297891735,0.560655421726804,0.43596006883328,0.2933531432838,0.517086863031111,0,1.690605505112,0,1.04007436911366,1.02882949704857,1.41849132023278,2.39779961114489,1.85871391755592,0.542621605391443,0.823240336780769,0,2.84313558994037,1.58390374586686,0,0,0.799783929456456,0,0,0,0.239624855491583,0,0,1.73737568001095,1.02738161275192,2.14873155887875,0.112085143993527,0,0,0,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0.613457458595699,0.500170521059677,0.542530047399471,0.415941723061614,0.356857977594324,0.630809660135739,0.468565659970853,0.902838299183157,2.27407504055985,0,0,1.29058417979192,0.695068915744663,0.783204629850962,0.343143423810856,0.206768026122887,0,0,0.303127571446259,0,0,1.48864684691266,0.767309866440312,0,0.512556597022804,0,1.28683136914886,0,0,0.177561725313127,0.410635780069046,0.519254429183621,0.697262270759755,0.120859449591622,1.00253235151642,0.552485933615378,0.918515585316854,0.728364672026868,1.04899531967539,0.902399225814824,0.616122696835318,0.784349769176855,2.92278449306521,0.633309773357254,0,0.850468526382578,0.215915916102139,1.54227252690289,0,0.501689773854853,0.254876273045038,1.66215201785745,0.223874754722178,0.219259876645935,0.261435451024901,0.769350375349168,0.984043937099117,0,0.206082023295445,0,0,1.14853107599234,1.95018073810956,0,0.48335359146061,0.770243085573222,0.460511024178389,0.689182862422653,0.966782203814463,0.870100163485371,0.255679882248303,0,0.495854746082934,0.768760269460425,0.382838137483752,0.708104465988849,1.85938219718914,1.25924938732256,0.6970372701606,0,1.06461206063404,2.60979897622522,1.8532421910392,1.28812398067792,0.372158369359667,0.949138274156178,1.5250415513906,1.79128453917934,1.28381696410176,0,0,0.359744915166629,1.37268514868027,1.41374882814824,1.41527737101321,0,0.421258456238981,0.975267478179181,0.243713489631284,0,0.409499734223957,0.565621727814851,0,1.10273068709225,1.3268779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|phase1_expression=0.54503513781167,0.856402095563933,0.422863212287913,2.00146596706261,0.446961094427288,2.61701557230111,0,1.26343974685366,0.522371256399677,0.737201809504527,0.697801167972428,0.873765488520689,0.527533956456907,0.495065411840187,0.331397375727916,0.672325146451775,0,0.730310090387373,0.487932798790507,0.492484232307152,0.408001382488506,0.626909442956176,0,0.273748850145768,0.376627918784408,0.152826811495903,0.656804715599566,0.157421562627358,0,0,0,1.83884244895785,0,0.369754010166788,0.0774672005803016,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0.853460445133014,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.511450247374121,1.0843174571537,1.00267582127178,1.01392563272577,0,3.89307896242109,0.378139268656271,0.443458794925128,0.175669571386252,0.654895377488563,0.728590576585084,1.11235332835329,0,0.174129737299267,0.132957960518865,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0.805658634218294,0.760272105718513,0.732186172644509,0.735326160691737,0,0,0.673588117878509,0.563057402416611,0,0,0.366403487860815,0,0,3.05265836499774,0.993943903390637,0.379891534993739,1.19168262731897,0,0.709336764396714,0,0,0.49333509683432,0.933633106199299,0.269421344139376,0.490385709340376,0.302714855289863,0.576175924479999,0.468642863667593,0.624320153660641,0.570471821544449,0.597794722207204,1.29177948508141,0.323745888736263,0.421352420106746,1.42907919878425,0.982674538494144,0.723280468230358,0,1.23633464639278,1.82032272387605,2.15585442544872,0.336672227908132,0.500474079487857,1.6623846929051,1.75591048352335,1.5324389789951,0,1.36118619792025,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.92747276314595,0,0,0.168776332241266,1.16924406193438,0.504867548488229,0.460249493211497,0,0.710019185033229,0.201504196455281,0.169560592310488,0.773043412653187,1.36373060295417,2.00763216772303,0.121973706129595,0.132529768321485,0.464775771478074,0.310983165046111,0,0,0,0.643240938192885,1.38134921352481,3.25057549622385,0,0.354920400119532,0,0,0.330881918197182,0.217879444092406,0,0.674156540800822,0.196221465125346,0,1.4763109092493,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0.122988438543114,1.20097467208968,0.548751427043128,1.1240175325762,0.402115889646523,0,0.325808305310325,3.11980435583874,1.44331342025273,0.34779121492523,0.352226082707465,0.288732895522148,0,0.380508304469197,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.567100388969546,1.52249488594842,0.871901815541886,0.766765358330422,0,0.088048434013226,0.207328115540772,0,0,0.253991577168676,0.763976851116555,0,0,0.102827492703324,0,0.857479297891735,0.560655421726804,0.43596006883328,0.2933531432838,0.517086863031111,0,1.690605505112,0,1.04007436911366,1.02882949704857,1.41849132023278,2.39779961114489,1.85871391755592,0.542621605391443,0.823240336780769,0,2.84313558994037,1.58390374586686,0,0,0.799783929456456,0,0,0,0.239624855491583,0,0,1.73737568001095,1.02738161275192,2.14873155887875,0.112085143993527,0,0,0,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0.613457458595699,0.500170521059677,0.542530047399471,0.415941723061614,0.356857977594324,0.630809660135739,0.468565659970853,0.902838299183157,2.27407504055985,0,0,1.29058417979192,0.695068915744663,0.783204629850962,0.343143423810856,0.206768026122887,0,0,0.303127571446259,0,0,1.48864684691266,0.767309866440312,0,0.512556597022804,0,1.28683136914886,0,0,0.177561725313127,0.410635780069046,0.519254429183621,0.697262270759755,0.120859449591622,1.00253235151642,0.552485933615378,0.918515585316854,0.728364672026868,1.04899531967539,0.902399225814824,0.616122696835318,0.784349769176855,2.92278449306521,0.633309773357254,0,0.850468526382578,0.215915916102139,1.54227252690289,0,0.501689773854853,0.254876273045038,1.66215201785745,0.223874754722178,0.219259876645935,0.261435451024901,0.769350375349168,0.984043937099117,0,0.206082023295445,0,0,1.14853107599234,1.95018073810956,0,0.48335359146061,0.770243085573222,0.460511024178389,0.689182862422653,0.966782203814463,0.870100163485371,0.255679882248303,0,0.495854746082934,0.768760269460425,0.382838137483752,0.708104465988849,1.85938219718914,1.25924938732256,0.6970372701606,0,1.06461206063404,2.60979897622522,1.8532421910392,1.28812398067792,0.372158369359667,0.949138274156178,1.5250415513906,1.79128453917934,1.28381696410176,0,0,0.359744915166629,1.37268514868027,1.41374882814824,1.41527737101321,0,0.421258456238981,0.975267478179181,0.243713489631284,0,0.409499734223957,0.565621727814851,0,1.10273068709225,1.3268779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| ||
|short_description=p5@SPRYD7 | |||
}} | }} |
Latest revision as of 17:21, 17 September 2015
Short description: | p5@SPRYD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPRYD7_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000495454_5end |
EntrezGene: | SPRYD7 |
HGNC: | 14297 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.10e-13 | 43 |
smooth muscle myoblast | 2.10e-13 | 43 |
muscle precursor cell | 2.73e-12 | 58 |
myoblast | 2.73e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.73e-12 | 58 |
muscle cell | 2.19e-09 | 55 |
vascular associated smooth muscle cell | 1.63e-08 | 32 |
electrically responsive cell | 5.37e-08 | 61 |
electrically active cell | 5.37e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 7.53e-14 | 83 |
dense mesenchyme tissue | 7.31e-13 | 73 |
skeletal muscle tissue | 2.76e-12 | 62 |
striated muscle tissue | 2.76e-12 | 62 |
myotome | 2.76e-12 | 62 |
somite | 3.43e-12 | 71 |
presomitic mesoderm | 3.43e-12 | 71 |
presumptive segmental plate | 3.43e-12 | 71 |
dermomyotome | 3.43e-12 | 71 |
trunk paraxial mesoderm | 3.43e-12 | 71 |
paraxial mesoderm | 6.27e-12 | 72 |
presumptive paraxial mesoderm | 6.27e-12 | 72 |
muscle tissue | 1.04e-11 | 64 |
musculature | 1.04e-11 | 64 |
musculature of body | 1.04e-11 | 64 |
epithelial vesicle | 1.27e-11 | 78 |
trunk mesenchyme | 4.60e-11 | 122 |
mesenchyme | 3.34e-09 | 160 |
entire embryonic mesenchyme | 3.34e-09 | 160 |
trunk | 3.35e-09 | 199 |
epithelium | 4.33e-09 | 306 |
unilaminar epithelium | 4.59e-09 | 148 |
cell layer | 7.22e-09 | 309 |
trunk blood vessel | 1.90e-07 | 7 |
vasculature | 9.72e-07 | 78 |
vascular system | 9.72e-07 | 78 |