FFCP PHASE1:Hg19::chr13:46705063..46705075,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:46705063..46705075,- to FFCP PHASE1:Hg19::chr13:46705063..46705075,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-76bp_to_AY960627_5end | |||
|cluster_id=chr13:46705063..46705075,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_19_at_LCP1_5end | |||
|id=chr13:46705063..46705075,- | |||
|ontology_enrichment_celltype=CL:0000738!8.77e-80!140;CL:0000037!2.52e-78!172;CL:0000566!2.52e-78!172;CL:0000988!6.32e-77!182;CL:0002032!2.74e-76!165;CL:0000837!2.74e-76!165;CL:0002031!1.82e-65!124;CL:0002087!1.25e-62!119;CL:0000763!7.68e-59!112;CL:0000049!7.68e-59!112;CL:0000766!5.21e-57!76;CL:0000557!1.27e-53!71;CL:0002009!7.99e-51!65;CL:0000839!3.65e-50!70;CL:0002194!2.13e-48!63;CL:0000576!2.13e-48!63;CL:0000040!2.13e-48!63;CL:0000559!2.13e-48!63;CL:0002057!3.51e-46!42;CL:0000860!4.71e-42!45;CL:0000134!1.05e-21!358;CL:0002320!1.25e-20!365;CL:0000219!6.92e-17!390;CL:0000542!8.79e-15!53;CL:0000051!8.79e-15!53;CL:0000838!4.61e-14!52;CL:0000048!1.57e-12!430;CL:0000723!2.42e-12!436;CL:0000034!1.49e-11!444;CL:0000990!2.36e-09!8;CL:0000451!5.17e-09!10;CL:0002393!2.09e-08!9;CL:0002397!2.09e-08!9;CL:0000453!1.17e-07!5;CL:0000084!2.45e-07!25;CL:0000827!2.45e-07!25;CL:0000945!3.33e-07!24;CL:0000826!3.33e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.41e-58;39!CL:0000234;8.41e-58;39!CL:0000860;3.25e-57;33!CL:0002057;3.25e-57;33!CL:0000576;1.97e-35;48!CL:0000766;9.77e-29;69!CL:0000763;1.38e-15;100!CL:0000738;3.48e-14;136!CL:0000775;2.92e-13;3!CL:0002087;1.34e-11;104!CL:0000235;9.28e-11;6!CL:0000453;8.00e-08;5!CL:0000219;8.16e-08;193!CL:0000990;3.85e-07;8!CL:0000988;4.04e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.53e-74,48;CL:0000234,6.53e-74,48;CL:0000860,3.35e-64,42;CL:0002057,3.35e-64,42;CL:0002009,3.07e-63,61;CL:0002194,2.32e-61,59;CL:0000576,2.32e-61,59;CL:0000040,2.32e-61,59;CL:0000559,2.32e-61,59;CL:0000766,7.04e-60,72;CL:0000557,6.44e-57,67;CL:0000839,4.32e-54,66;CL:0000738,2.50e-49,136;CL:0000763,1.83e-47,108;CL:0000049,1.83e-47,108;CL:0002031,2.37e-43,120;CL:0002087,5.45e-43,115;CL:0002032,3.59e-42,161;CL:0000837,3.59e-42,161;CL:0000037,5.30e-40,168;CL:0000988,1.83e-37,177;CL:0000134,1.16e-13,354;CL:0000775,2.77e-13,3;CL:0002320,3.38e-13,361;CL:0000219,1.45e-11,386;CL:0000235,9.82e-11,6;CL:0000048,1.43e-09,427;CL:0000723,2.70e-09,433;CL:0000034,6.11e-09,441;CL:0000785,2.24e-08,2;CL:0000955,2.24e-08,2;CL:0000818,2.24e-08,2;CL:0000954,2.24e-08,2;CL:0000816,2.24e-08,2;CL:0000453,7.41e-08,5;CL:0000990,3.78e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.42e-46;42!CL:0000049;6.83e-16;108!CL:0000954;3.01e-08;2 | |||
|ontology_enrichment_disease=DOID:2531!6.57e-16!51;DOID:0060083!6.57e-16!51;DOID:1240!2.96e-09!39;DOID:0060058!3.40e-09!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.26e-58!102;UBERON:0003061!4.26e-58!102;UBERON:0002193!5.19e-52!112;UBERON:0002371!4.08e-47!80;UBERON:0001474!2.43e-42!86;UBERON:0002405!1.96e-33!115;UBERON:0004765!6.16e-33!101;UBERON:0001434!6.16e-33!101;UBERON:0002384!3.58e-19!375;UBERON:0003081!3.95e-15!216;UBERON:0002204!2.13e-12!167;UBERON:0000178!2.12e-08!15;UBERON:0000179!2.12e-08!15;UBERON:0000463!2.12e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.79e-49,76;UBERON:0002390,1.08e-46,98;UBERON:0003061,1.08e-46,98;UBERON:0001474,4.13e-45,82;UBERON:0002193,1.42e-41,108;UBERON:0004765,2.09e-40,90;UBERON:0002405,7.54e-39,93;UBERON:0001434,1.41e-35,100;UBERON:0002204,4.42e-18,167;UBERON:0003081,5.11e-18,203;UBERON:0002384,1.45e-12,371;UBERON:0000926,2.72e-09,315;UBERON:0004120,2.72e-09,315;UBERON:0006603,2.72e-09,315 | |||
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|short_description=p19@LCP1 | |||
}} | }} |
Latest revision as of 13:29, 17 September 2015
Short description: | p19@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_LCP1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -76bp_to_AY960627_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.79e-49 | 76 |
hematopoietic system | 1.08e-46 | 98 |
blood island | 1.08e-46 | 98 |
bone element | 4.13e-45 | 82 |
hemolymphoid system | 1.42e-41 | 108 |
skeletal element | 2.09e-40 | 90 |
immune system | 7.54e-39 | 93 |
skeletal system | 1.41e-35 | 100 |
musculoskeletal system | 4.42e-18 | 167 |
lateral plate mesoderm | 5.11e-18 | 203 |
connective tissue | 1.45e-12 | 371 |
mesoderm | 2.72e-09 | 315 |
mesoderm-derived structure | 2.72e-09 | 315 |
presumptive mesoderm | 2.72e-09 | 315 |