FFCP PHASE1:Hg19::chr13:45914238..45914257,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:45914238..45914257,- to FFCP PHASE1:Hg19::chr13:45914238..45914257,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7178 | |EntrezGene=7178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12022 | |HGNC=12022 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=135bp_to_ENST00000533567_5end | |||
|cluster_id=chr13:45914238..45914257,- | |||
|description=CAGE_peak_4_at_TPT1_5end | |||
|id=chr13:45914238..45914257,- | |||
|ontology_enrichment_celltype=CL:0002057!6.96e-20!42;CL:0000860!5.18e-19!45;CL:0002087!5.43e-15!119;CL:0002031!6.10e-14!124;CL:0002009!1.15e-13!65;CL:0002194!3.01e-13!63;CL:0000576!3.01e-13!63;CL:0000040!3.01e-13!63;CL:0000559!3.01e-13!63;CL:0000738!1.39e-12!140;CL:0000557!6.13e-11!71;CL:0000839!6.37e-11!70;CL:0000766!9.13e-11!76;CL:0000037!1.71e-09!172;CL:0000566!1.71e-09!172;CL:0002032!2.02e-09!165;CL:0000837!2.02e-09!165;CL:0000988!3.37e-08!182;CL:0000134!1.07e-07!358;CL:0002320!1.62e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.35e-17;33!CL:0002057;2.35e-17;33!CL:0000473;5.43e-14;39!CL:0000234;5.43e-14;39!CL:0000576;5.16e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.34e-20,42;CL:0002057,6.34e-20,42;CL:0000473,1.11e-19,48;CL:0000234,1.11e-19,48;CL:0002087,2.58e-15,115;CL:0002031,3.22e-14,120;CL:0002009,3.67e-14,61;CL:0002194,9.62e-14,59;CL:0000576,9.62e-14,59;CL:0000040,9.62e-14,59;CL:0000559,9.62e-14,59;CL:0000738,8.47e-13,136;CL:0000557,2.55e-11,67;CL:0000839,3.04e-11,66;CL:0000766,4.68e-11,72;CL:0000037,1.25e-09,168;CL:0002032,1.45e-09,161;CL:0000837,1.45e-09,161;CL:0000988,2.02e-08,177;CL:0000134,8.51e-08,354;CL:0002320,1.30e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;9.83e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.59e-10!80;UBERON:0002390!7.19e-09!102;UBERON:0003061!7.19e-09!102;UBERON:0001474!2.66e-08!86;UBERON:0002193!6.97e-08!112;UBERON:0004765!3.11e-07!101;UBERON:0001434!3.11e-07!101;UBERON:0002405!3.87e-07!115;UBERON:0002384!8.23e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-10,76;UBERON:0002390,4.36e-09,98;UBERON:0003061,4.36e-09,98;UBERON:0001474,1.45e-08,82;UBERON:0002405,5.19e-08,93;UBERON:0002193,5.26e-08,108;UBERON:0004765,1.08e-07,90;UBERON:0001434,3.17e-07,100;UBERON:0002384,7.05e-07,371 | |||
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| ||
|short_description=p4@TPT1 | |||
}} | }} |
Latest revision as of 12:00, 17 September 2015
Short description: | p4@TPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 135bp_to_ENST00000533567_5end |
EntrezGene: | TPT1 |
HGNC: | 12022 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.34e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.34e-20 | 42 |
defensive cell | 1.11e-19 | 48 |
phagocyte | 1.11e-19 | 48 |
nongranular leukocyte | 2.58e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 3.22e-14 | 120 |
macrophage dendritic cell progenitor | 3.67e-14 | 61 |
monopoietic cell | 9.62e-14 | 59 |
monocyte | 9.62e-14 | 59 |
monoblast | 9.62e-14 | 59 |
promonocyte | 9.62e-14 | 59 |
leukocyte | 8.47e-13 | 136 |
granulocyte monocyte progenitor cell | 2.55e-11 | 67 |
myeloid lineage restricted progenitor cell | 3.04e-11 | 66 |
myeloid leukocyte | 4.68e-11 | 72 |
hematopoietic stem cell | 1.25e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.45e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-09 | 161 |
hematopoietic cell | 2.02e-08 | 177 |
mesenchymal cell | 8.51e-08 | 354 |
connective tissue cell | 1.30e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.96e-10 | 76 |
hematopoietic system | 4.36e-09 | 98 |
blood island | 4.36e-09 | 98 |
bone element | 1.45e-08 | 82 |
immune system | 5.19e-08 | 93 |
hemolymphoid system | 5.26e-08 | 108 |
skeletal element | 1.08e-07 | 90 |
skeletal system | 3.17e-07 | 100 |
connective tissue | 7.05e-07 | 371 |