FFCP PHASE1:Hg19::chr13:45010776..45010795,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:45010776..45010795,- to FFCP PHASE1:Hg19::chr13:45010776..45010795,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8848 | |EntrezGene=8848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16826 | |HGNC=16826 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_ENST00000487881_5end | |||
|cluster_id=chr13:45010776..45010795,- | |||
|description=CAGE_peak_13_at_TSC22D1_5end | |||
|id=chr13:45010776..45010795,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;8.50e-13;5!CL:0000163;3.94e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.71e-13,5;CL:0002028,7.71e-13,5;CL:0000163,3.74e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-31!115;UBERON:0002020!1.15e-12!34;UBERON:0003528!1.15e-12!34;UBERON:0002619!3.47e-12!22;UBERON:0001869!1.79e-11!32;UBERON:0001893!2.04e-11!34;UBERON:0002791!5.67e-11!33;UBERON:0001950!8.54e-11!20;UBERON:0001049!9.14e-11!57;UBERON:0005068!9.14e-11!57;UBERON:0006241!9.14e-11!57;UBERON:0007135!9.14e-11!57;UBERON:0000956!1.77e-10!25;UBERON:0000203!1.77e-10!25;UBERON:0003080!9.63e-10!42;UBERON:0001017!2.52e-09!82;UBERON:0002780!2.91e-09!41;UBERON:0001890!2.91e-09!41;UBERON:0006240!2.91e-09!41;UBERON:0005743!4.41e-09!86;UBERON:0002616!4.88e-09!59;UBERON:0003075!1.33e-08!86;UBERON:0007284!1.33e-08!86;UBERON:0000468!2.09e-08!659;UBERON:0000073!2.43e-08!94;UBERON:0001016!2.43e-08!94;UBERON:0000922!2.53e-08!612;UBERON:0000467!3.01e-08!625;UBERON:0000480!4.01e-08!626;UBERON:0000955!4.34e-08!69;UBERON:0006238!4.34e-08!69;UBERON:0000923!5.38e-08!604;UBERON:0005291!5.38e-08!604;UBERON:0006598!5.38e-08!604;UBERON:0002532!5.38e-08!604;UBERON:0002346!6.59e-08!90;UBERON:0002050!7.10e-08!605;UBERON:0005423!7.10e-08!605;UBERON:0003056!2.98e-07!61;UBERON:0004121!8.79e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.42e-16;15!UBERON:0000179;2.42e-16;15!UBERON:0000463;2.42e-16;15!UBERON:0002619;3.03e-12;22!UBERON:0002791;9.98e-11;32!UBERON:0001950;1.21e-10;20!UBERON:0000956;1.21e-10;25!UBERON:0000203;1.21e-10;25!UBERON:0003528;4.46e-10;34!UBERON:0002020;4.46e-10;34!UBERON:0001893;6.54e-10;34!UBERON:0001871;3.69e-09;6!UBERON:0002771;4.48e-09;2!UBERON:0001869;4.87e-09;32!UBERON:0005631;6.50e-07;10!UBERON:0000158;6.50e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.78e-16,15;UBERON:0000179,1.78e-16,15;UBERON:0000463,1.78e-16,15;UBERON:0007023,2.13e-15,114;UBERON:0002619,3.01e-12,22;UBERON:0002791,5.99e-12,32;UBERON:0003528,3.87e-11,34;UBERON:0002020,3.87e-11,34;UBERON:0001893,3.87e-11,34;UBERON:0001950,1.17e-10,20;UBERON:0000956,1.21e-10,25;UBERON:0000203,1.21e-10,25;UBERON:0001869,6.45e-10,32;UBERON:0002771,2.72e-09,2;UBERON:0001871,3.60e-09,6;UBERON:0003056,4.17e-09,61;UBERON:0002780,6.44e-09,41;UBERON:0001890,6.44e-09,41;UBERON:0003080,6.44e-09,41;UBERON:0006240,6.44e-09,41;UBERON:0003075,3.71e-08,82;UBERON:0007284,3.71e-08,82;UBERON:0002346,1.26e-07,86;UBERON:0001049,3.27e-07,56;UBERON:0005068,3.27e-07,56;UBERON:0006241,3.27e-07,56;UBERON:0007135,3.27e-07,56 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.37129905888014,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0,0,0,0.369754010166788,0.0774672005803016,0,0.587200878669695,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0.426224750532694,0.580418477257168,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0.12786256184353,0,0,0.579386075843295,0,0,0.472674085820339,1.99556457716308,1.40535657109002,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.243947412259191,0,0.232387885739037,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.55146986366197,0,0.237270619111097,0.269662616320329,0.392442930250692,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.587043471179108,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.358234090811393,0.581267877027924,0.766765358330422,1.47798971368783,3.16974362447614,0.207328115540772,1.72943944100354,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,1.91381625495949,0.749007023947182,0,0,0.36807447515742,0,0,0.415941723061614,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0.862856803274467,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.241718899183244,0.40101294060657,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0,0,0,0.501689773854853,0,0,0,1.31555925987561,0.784306353074702,0,0,0.325378394664303,0.412164046590889,0,0.082509499920588,0,0.650060246036521,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0,0,0.30347334256665,0,0.31481234683064,0.6970372701606,2.7723022215848,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.424216295861138,1.13008116620243,0,0,0.876901770507525,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0.376575203107117,0.43050537267123,0,0.443430153536676,0,5.58192370155386,3.82318603571188,5.69647187174163,1.66762242820452,0.822724546172388,1.94541993357815,1.08006287447623,3.96562588147135,0.213648142254946,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.811367035427949,0,2.81974010175699,0,0,0,0,0.568272293612826,3.34242278632766,0.296964680832639,2.76444631889309,0,1.26602474769461,0.445234820091624,0,0,0.597743964753209,0,0,0,0,0,0.179736702294654,0.358042349351218,0,0.295930216910801,4.7896618469388,0,0.969332746095218,0.74214478529481,1.99613798001194,0.7812832832557,0.437299999980979,0.724999575434793,0.341380344856499,0.254253650292766,0,0,0.291604613383254,0.173624994933292,0,0.60298219312704,0,0.552896299656123,0.295547618953547,0.87754158861589,0.653630781113941,0,0.384751292518985,1.36730467016401,0.23056390438806,0.0897576444097721,0.760531603454056,3.82801391678303,0.0915975934018623,3.19820865611181,1.02193298195737,0,0.498635045700469,0,0,0,0,0.476809736941136,0,0.163232808159148,0,0.432777279484182,0,0.442287822516696,0.611030144933625,0,0,0.208843899010911,0,0.802577647298789,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0.664653872707185,0,0.941798755221676,1.19472429772959,0,0,0,0.293977192243133,0,0.873633341210151,0,0.580537987734511,0.0730893170861856,0.246346371159628,0.0969890164884194,0,0.677942222341597,0.274083849293502,0.19871461170299,0.0633107959558787,0.195551382734803,0,0.85381197895741,0.599428828746391,0.144090417154106,0,0.343189995723929,1.58460277786965,0,0.942776138467182,0,0,0,0,0,0.547621515567972,0,0,0,0,0.229160424011684,0.717873024576814,0.399358000997982,1.28767814440971,0.446342914883745,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,2.38568906942791,0.817220436669454,0.160753148465019,0.137539436597234,0,0,0.77380195455795,0.303747783290123,0,0.157611414598396,0.262272940674991,0.316801009558219,0.896436696664224,0.191915197319445,1.42939065274673,0.662091970365432,0,0.542999601753713,0,0.979762080328227,0,0.492555124496034,0.17038802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| ||
|short_description=p13@TSC22D1 | |||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p13@TSC22D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TSC22D1_5end |
Coexpression cluster: | NA |
Association with transcript: | -44bp_to_ENST00000487881_5end |
EntrezGene: | TSC22D1 |
HGNC: | 16826 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.71e-13 | 5 |
basophil mast progenitor cell | 7.71e-13 | 5 |
endocrine cell | 3.74e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood | 1.78e-16 | 15 |
haemolymphatic fluid | 1.78e-16 | 15 |
organism substance | 1.78e-16 | 15 |
adult organism | 2.13e-15 | 114 |
regional part of cerebral cortex | 3.01e-12 | 22 |
regional part of telencephalon | 5.99e-12 | 32 |
brain grey matter | 3.87e-11 | 34 |
gray matter | 3.87e-11 | 34 |
telencephalon | 3.87e-11 | 34 |
neocortex | 1.17e-10 | 20 |
cerebral cortex | 1.21e-10 | 25 |
pallium | 1.21e-10 | 25 |
cerebral hemisphere | 6.45e-10 | 32 |
middle temporal gyrus | 2.72e-09 | 2 |
temporal lobe | 3.60e-09 | 6 |
pre-chordal neural plate | 4.17e-09 | 61 |
regional part of forebrain | 6.44e-09 | 41 |
forebrain | 6.44e-09 | 41 |
anterior neural tube | 6.44e-09 | 41 |
future forebrain | 6.44e-09 | 41 |
neural plate | 3.71e-08 | 82 |
presumptive neural plate | 3.71e-08 | 82 |
neurectoderm | 1.26e-07 | 86 |
neural tube | 3.27e-07 | 56 |
neural rod | 3.27e-07 | 56 |
future spinal cord | 3.27e-07 | 56 |
neural keel | 3.27e-07 | 56 |