FFCP PHASE1:Hg19::chr13:33002432..33002443,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:33002432..33002443,- to FFCP PHASE1:Hg19::chr13:33002432..33002443,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90634 | |EntrezGene=90634 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25037 | |HGNC=25037 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TBK1,Q9UQP6 | |UniProt=Q5TBK1,Q9UQP6 | ||
|association_with_transcript=-117bp_to_ENST00000380130,NM_001079691,NM_052818,uc001uuc.2,uc001uud.2,uc001uuf.2,uc010tdy.1_5end | |||
|cluster_id=chr13:33002432..33002443,- | |||
|description=CAGE_peak_3_at_N4BP2L1_5end | |||
|id=chr13:33002432..33002443,- | |||
|ontology_enrichment_celltype=CL:0000738!6.78e-28!140;CL:0002087!4.82e-24!119;CL:0000037!6.86e-24!172;CL:0000566!6.86e-24!172;CL:0002031!1.60e-23!124;CL:0000988!2.49e-21!182;CL:0002032!1.09e-20!165;CL:0000837!1.09e-20!165;CL:0000542!4.29e-16!53;CL:0000051!4.29e-16!53;CL:0000838!5.09e-16!52;CL:0000791!7.17e-14!18;CL:0000789!7.17e-14!18;CL:0002420!7.17e-14!18;CL:0002419!7.17e-14!18;CL:0000790!7.17e-14!18;CL:0000084!8.85e-12!25;CL:0000827!8.85e-12!25;CL:0002057!4.21e-10!42;CL:0000625!2.90e-09!11;CL:0000839!6.20e-09!70;CL:0000766!8.41e-09!76;CL:0000557!8.44e-09!71;CL:0000860!1.15e-08!45;CL:0002009!5.83e-08!65;CL:0002194!6.37e-08!63;CL:0000576!6.37e-08!63;CL:0000040!6.37e-08!63;CL:0000559!6.37e-08!63;CL:0000763!1.65e-07!112;CL:0000049!1.65e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.76e-17;18!CL:0000789;1.76e-17;18!CL:0002419;1.76e-17;18!CL:0000625;1.88e-12;11!CL:0000084;6.80e-12;25!CL:0000784;1.23e-09;3!CL:0000624;8.10e-08;6!CL:0000542;2.89e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.26e-21,136;CL:0000791,3.26e-18,18;CL:0000789,3.26e-18,18;CL:0002420,3.26e-18,18;CL:0002419,3.26e-18,18;CL:0000790,3.26e-18,18;CL:0002087,6.74e-16,115;CL:0000037,5.56e-15,168;CL:0002031,9.57e-15,120;CL:0000988,9.65e-14,177;CL:0000625,8.22e-13,11;CL:0000084,2.12e-12,25;CL:0000827,2.12e-12,25;CL:0002032,9.86e-12,161;CL:0000837,9.86e-12,161;CL:0000838,7.87e-11,52;CL:0000542,1.49e-10,53;CL:0000051,1.49e-10,53;CL:0000784,4.13e-10,3;CL:0000624,3.01e-08,6;CL:0000766,5.59e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;1.76e-17;18!CL:0000051;2.89e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.60e-19!115;UBERON:0002390!2.94e-12!102;UBERON:0003061!2.94e-12!102;UBERON:0002193!8.99e-11!112;UBERON:0001893!1.30e-09!34;UBERON:0002020!2.42e-09!34;UBERON:0003528!2.42e-09!34;UBERON:0002791!2.92e-09!33;UBERON:0001049!4.16e-09!57;UBERON:0005068!4.16e-09!57;UBERON:0006241!4.16e-09!57;UBERON:0007135!4.16e-09!57;UBERON:0001869!9.23e-09!32;UBERON:0002780!1.16e-08!41;UBERON:0001890!1.16e-08!41;UBERON:0006240!1.16e-08!41;UBERON:0003080!3.24e-08!42;UBERON:0002371!1.79e-07!80;UBERON:0002619!2.55e-07!22;UBERON:0002616!3.41e-07!59;UBERON:0002405!3.74e-07!115;UBERON:0000956!5.53e-07!25;UBERON:0000203!5.53e-07!25 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.42e-10,98;UBERON:0003061,2.42e-10,98;UBERON:0002193,7.17e-09,108;UBERON:0002370,3.50e-07,4;UBERON:0005058,3.50e-07,4;UBERON:0009113,3.50e-07,4;UBERON:0003295,3.50e-07,4;UBERON:0005562,3.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.458480434487708,0.328402357799783,0.236132343941038,1.57345710739562,1.53531759238885,0.77408061658038,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,0,0.802177789880567,1.30206522429511,1.34349284543955,0.647787332037959,1.03030227053675,1.30858414901608,0.377875943688809,0.485168122375632,0.697287110717054,0,0,0.575384784644301,0.256160706529101,0.945928919554341,1.03423704220986,1.29096936716765,1.35426486594342,0.376484679085209,0.272906150057846,0.449446968890169,0.612167784741805,0.320929027076094,0,1.31940520074686,0.997318288108159,2.13112375266347,0,0,0,0.75374599577023,0,0.65156653411535,0,0.368277635987565,0.316462387440884,0.422510572623884,0.637812899895131,0.628975936525128,1.01095768031846,0.901061357049038,0.803627933485401,0.570025487482497,0.59675003159727,0.730656615058536,0,0,0,0.853460445133014,0.800791974072025,2.29900975981793,0.661044872784862,0,1.1384259382189,0,1.52909291250092,0,0,1.58030450865046,1.7703879310245,1.57204305099666,0.616804496998528,0.668745981562712,1.30368906653436,2.8406868344084,0,0.334231370655521,0.883817722424512,1.32920336750173,1.62482318259009,0.896639238079726,1.56071217071854,0.986627427622057,2.21080014228679,0.869409257205157,0.741432815810302,1.33770414044857,1.04535523804977,0.566546713487831,1.53288197440768,3.09264700934367,0.506039384039006,1.27426165729639,4.55758417699493,0.950452044448374,0.903450714466637,0.76791966692651,3.74792179657038,0.710331756132051,1.64225599384209,1.61285394579786,1.06976078313403,1.88271725047639,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.392937226493138,0,0,0,0,0,1.66943437013739,2.85997455390064,1.48583000531826,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,0,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,1.26755034821831,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,1.23108503043699,0.468008530278475,0.594524649154913,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.352193736052904,0.829312462163088,1.00883967391873,1.38866676769018,0.063497894292169,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0.896681151948218,2.56139988262505,1.07813787429759,0.898401253958239,0.508189248444927,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0.415941723061614,0,0,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,1.72571360654893,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0.831076008928724,0,0,0.261435451024901,0.256450125116389,0,0,0.515205058238611,0.183138929636687,0.165018999841176,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,1.01489521846434,0,0,0.714695326373367,0.411362273086194,0,2.16012574895246,1.58625035258854,0.106824071127473,0,0.735120647943095,0.185803175125719,0.432807638929335,0.924843963529383,0.318852545457645,0.399158742865633,0.191505370132367,0,0.324621940274555,0.561594356226918,0.456469358066384,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0.445773537109913,0,0,0.296964680832639,0,0.994147647766298,0.844016498463076,0.222617410045812,0,0,0.796991953004279,0.276283915531148,0.503865495708552,0,0.615424027305347,0,0,0,0.511572370226872,0.394573622547734,2.3948309234694,0,0,0.649376687132959,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0.885741385813839,0.361789315876224,0,0.442317039724898,0.886642856860642,0.438770794307945,0,0,1.15425387755696,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0.332423363800313,0,0,0,0,0.794682894901893,0,0,0,0.216388639742091,0,1.41532103205343,0,0,0,0.208843899010911,0.876214728748802,0,0.468528891450678,0.364909578431332,0,0,0.394584402849391,1.20990716048664,0.61214552326098,0.379119477770928,0.150323419414493,0,0.664653872707185,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.678923115418936,0,0.677942222341597,0,0,0.633107959558787,0,0,0.213452994739353,0,0,0,0.514784993585894,0,0.124252535565433,0.235694034616795,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0,0.458320848023367,0.717873024576814,0.199679000498991,0,0.223171457441873,0.268733889946905,0,0,0,0.164831716762333,0,0,0.0846733320657845,1.59045937961861,0.681017030557878,0.160753148465019,0,0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| 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| ||
|short_description=p3@N4BP2L1 | |||
}} | }} |
Latest revision as of 04:05, 17 September 2015
Short description: | p3@N4BP2L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_N4BP2L1_5end |
Coexpression cluster: | NA |
Association with transcript: | -117bp_to_ENST00000380130, NM_001079691, NM_052818, uc001uuc.2, uc001uud.2, uc001uuf.2, uc010tdy.1_5end |
EntrezGene: | N4BP2L1 |
HGNC: | 25037 |
UniProt: | Q5TBK1Q9UQP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.26e-21 | 136 |
mature alpha-beta T cell | 3.26e-18 | 18 |
alpha-beta T cell | 3.26e-18 | 18 |
immature T cell | 3.26e-18 | 18 |
mature T cell | 3.26e-18 | 18 |
immature alpha-beta T cell | 3.26e-18 | 18 |
nongranular leukocyte | 6.74e-16 | 115 |
hematopoietic stem cell | 5.56e-15 | 168 |
hematopoietic lineage restricted progenitor cell | 9.57e-15 | 120 |
hematopoietic cell | 9.65e-14 | 177 |
CD8-positive, alpha-beta T cell | 8.22e-13 | 11 |
T cell | 2.12e-12 | 25 |
pro-T cell | 2.12e-12 | 25 |
hematopoietic oligopotent progenitor cell | 9.86e-12 | 161 |
hematopoietic multipotent progenitor cell | 9.86e-12 | 161 |
lymphoid lineage restricted progenitor cell | 7.87e-11 | 52 |
lymphocyte | 1.49e-10 | 53 |
common lymphoid progenitor | 1.49e-10 | 53 |
plasmacytoid dendritic cell | 4.13e-10 | 3 |
CD4-positive, alpha-beta T cell | 3.01e-08 | 6 |
myeloid leukocyte | 5.59e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.42e-10 | 98 |
blood island | 2.42e-10 | 98 |
hemolymphoid system | 7.17e-09 | 108 |
thymus | 3.50e-07 | 4 |
hemolymphoid system gland | 3.50e-07 | 4 |
thymic region | 3.50e-07 | 4 |
pharyngeal gland | 3.50e-07 | 4 |
thymus primordium | 3.50e-07 | 4 |