FFCP PHASE1:Hg19::chr13:31736478..31736510,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:31736478..31736510,- to FFCP PHASE1:Hg19::chr13:31736478..31736510,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10808 | |EntrezGene=10808 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16969 | |HGNC=16969 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUG1 | |UniProt=E7EUG1 | ||
|association_with_transcript=0bp_to_ENST00000438061,uc001utl.2,uc010aax.1,uc010aay.1,uc010tds.1,uc010tdt.1_5end | |||
|cluster_id=chr13:31736478..31736510,- | |||
|description=CAGE_peak_6_at_HSPH1_5end | |||
|id=chr13:31736478..31736510,- | |||
|ontology_enrichment_celltype=CL:0002321!3.98e-10!248;CL:0000220!1.04e-09!246;CL:0000055!1.32e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002319;7.14e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.69e-07,72;CL:0002319,7.81e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.79e-11!94;UBERON:0001016!5.79e-11!94;UBERON:0004121!1.95e-10!169;UBERON:0000924!4.62e-10!173;UBERON:0006601!4.62e-10!173;UBERON:0001869!8.56e-10!32;UBERON:0000033!2.20e-09!123;UBERON:0002780!2.84e-09!41;UBERON:0001890!2.84e-09!41;UBERON:0006240!2.84e-09!41;UBERON:0005743!3.00e-09!86;UBERON:0001893!4.12e-09!34;UBERON:0002020!5.57e-09!34;UBERON:0003528!5.57e-09!34;UBERON:0000119!5.94e-09!312;UBERON:0001017!7.80e-09!82;UBERON:0000955!8.85e-09!69;UBERON:0006238!8.85e-09!69;UBERON:0000483!9.74e-09!309;UBERON:0001049!1.24e-08!57;UBERON:0005068!1.24e-08!57;UBERON:0006241!1.24e-08!57;UBERON:0007135!1.24e-08!57;UBERON:0002791!1.24e-08!33;UBERON:0003080!1.24e-08!42;UBERON:0002616!1.33e-08!59;UBERON:0000956!4.61e-08!25;UBERON:0000203!4.61e-08!25;UBERON:0000153!4.77e-08!129;UBERON:0007811!4.77e-08!129;UBERON:0000475!6.94e-08!365;UBERON:0003075!1.20e-07!86;UBERON:0007284!1.20e-07!86;UBERON:0002346!3.61e-07!90;UBERON:0002619!7.02e-07!22;UBERON:0003056!9.66e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.31e-11;32!UBERON:0000956;4.62e-11;25!UBERON:0000203;4.62e-11;25!UBERON:0001893;1.12e-10;34!UBERON:0002791;1.76e-10;32!UBERON:0003528;1.37e-09;34!UBERON:0002020;1.37e-09;34!UBERON:0001950;3.64e-09;20!UBERON:0002619;4.32e-09;22!UBERON:0002780;1.07e-07;41!UBERON:0001890;1.07e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.48e-12,32;UBERON:0004121,7.06e-12,171;UBERON:0000924,7.06e-12,171;UBERON:0006601,7.06e-12,171;UBERON:0001893,2.14e-11,34;UBERON:0001016,2.28e-11,89;UBERON:0002791,3.48e-11,32;UBERON:0000956,5.79e-11,25;UBERON:0000203,5.79e-11,25;UBERON:0002780,3.13e-10,41;UBERON:0001890,3.13e-10,41;UBERON:0003080,3.13e-10,41;UBERON:0006240,3.13e-10,41;UBERON:0003528,3.89e-10,34;UBERON:0002020,3.89e-10,34;UBERON:0001950,3.72e-09,20;UBERON:0001017,4.16e-09,81;UBERON:0002619,5.07e-09,22;UBERON:0010371,5.62e-09,104;UBERON:0000955,7.62e-09,68;UBERON:0006238,7.62e-09,68;UBERON:0000073,1.03e-08,53;UBERON:0002616,1.03e-08,53;UBERON:0010314,2.73e-08,132;UBERON:0001049,7.99e-08,56;UBERON:0005068,7.99e-08,56;UBERON:0006241,7.99e-08,56;UBERON:0007135,7.99e-08,56;UBERON:0003056,4.69e-07,61 | |||
|phase1_expression=0.363356758541113,0,0.704772020479856,2.00146596706261,0.893922188854576,0,0,0.631719873426831,0,0.982935746006035,0,1.31064823278103,0,0.495065411840187,0.662794751455832,1.34465029290355,1.20538905604795,0.730310090387373,1.46379839637152,0.369363174230364,0.612002073732759,0,1.14494394852423,2.46373965131192,1.50651167513763,0.916960868975415,1.06730766284929,1.25937250101887,0,0,0,0,0,1.10926203050036,1.23947520928483,4.69158467208491,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0.309706370895104,0,0,0.47296445977717,0,0,1.35426486594342,0,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0.852449501065388,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0.263384084775077,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0.541607727530031,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0,0.506039384039006,0,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0.767175371061182,0.722878304769133,0,0.579386075843295,0.795285947051099,0,0.850813354476611,1.55210578223795,0.966182642624386,2.61958150995425,0,0.741568885568859,1.62273696827342,1.56716763569341,0.797747763113191,0,0,0,0.79504962946682,0,0.694281003215189,1.13061588384802,0,0.275118041940067,0.626984899610432,0.775250277507987,0.71153252537342,0.33472061276467,1.20848795132744,0.760272105718513,0,0.735326160691737,0,0.892997282840798,0.44905874525234,0.112611480483322,1.53316637465883,0.949265659568129,0.549605231791222,0,0,0,0.496971951695318,1.64619665163954,1.85372853138506,0.860509862246441,1.06400514659507,0.560677600142307,3.20246987189115,1.2333377420858,0.622422070799533,0.67355336034844,0.817309515567294,0,0,0.234321431833797,1.5608003841516,0.570471821544449,0.448346041655403,1.40921398372518,1.45685649931318,2.10676210053373,1.83738754129404,1.10550885580591,0.413303124703062,0,0.989067717114227,0,0.718618141816238,2.02003336744879,1.25118519871964,1.10825646193673,0,0.30648779579902,0.150238058906597,1.47461838108027,0.358779271377724,0.213557388818567,0.423863802319124,0,0.515262646192195,0,0.930584281657949,1.0126579934476,1.07180705677318,0.252433774244115,0.276149695926898,0.161646056818812,0.710019185033229,1.61203357164224,1.01736355386293,3.47869535693934,2.45471508531751,1.72082757233402,1.46368447355514,1.06023814657188,0.813357600086629,0.518305275076852,1.26160425437814,0.72995471815166,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0.71181185733329,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.686271241194102,3.40225884766739,0,1.60846355858609,0.185176890317059,0,0,1.44331342025273,0.695582429850461,0.352226082707465,0.433099343283221,1.38895653772983,0.951270761172991,0,0,0.246217006087397,0.234004265139238,0.148631162288728,4.68669169933885,3.02367830757947,1.55952606966625,1.16426079513703,1.74380363108377,0.766765358330422,0.985326475791887,0.264145302039678,0,0,0.6312121671319,2.22242630022592,0.763976851116555,0,0,0.411309970813294,0.901029173531752,0.571652865261156,0.112131084345361,0.87192013766656,1.39342743059805,1.16344544182,0,0,0,2.08014873822732,0.257207374262142,0,0,0.428933980974443,0,0,0,0.355391948742546,0,2.41151501647669,9.58686804460323,1.59956785891291,0,0,0,2.39624855491583,0,0,2.75084482668401,0.821905290201534,0.179060963239896,0,0,0,0,4.57370323600434,0,0,1.50764638800914,0.637938751653163,0,0,0,0.12269149171914,0,0,0.415941723061614,0.356857977594324,1.41932173530541,0.117141414992713,0,0,0,1.99267679560631,0.553107505625109,0.955719759148911,0,0,0,0,0,0.303127571446259,0,0,0.992431231275107,0.306923946576125,0,0.512556597022804,1.02341449813341,0.965123526861645,0,1.54209693802656,1.9531789784444,1.39616165223476,0.519254429183621,1.04589340613963,0.120859449591622,2.00506470303285,0.276242966807689,1.37777337797528,0.546273504020151,0.655622074797121,0,0.539107359730903,0.784349769176855,1.46139224653261,0.73886140225013,0,0.170093705276516,1.0795795805107,0,0,0,0.509752546090077,0.831076008928724,0.895499018888713,0.438519753291869,0,1.28225062558195,0.656029291399411,1.95227036798582,0.412164046590889,2.47237555009527,2.80532299729999,0,0.650060246036521,1.6068392984416,0.96670718292122,0.924291702687866,0.614014698904518,0.551346289938122,0.644521469209642,0.870100163485371,1.44885266607372,0.534192213880424,1.81813406897076,0.768760269460425,1.14851441245126,0.6069466851333,2.32422774648643,0,0.6970372701606,0.616067160352178,1.06461206063404,1.73986598415015,1.48259375283136,3.43499728180779,0.744316738719335,1.2655176988749,0.571890581771475,0.255897791311334,0,0,0,1.07923474549989,1.09814811894422,0.706874414074119,0,3.17020642346017,1.68503382495592,0,0.974853958525138,1.056501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|phase1_expression=0.363356758541113,0,0.704772020479856,2.00146596706261,0.893922188854576,0,0,0.631719873426831,0,0.982935746006035,0,1.31064823278103,0,0.495065411840187,0.662794751455832,1.34465029290355,1.20538905604795,0.730310090387373,1.46379839637152,0.369363174230364,0.612002073732759,0,1.14494394852423,2.46373965131192,1.50651167513763,0.916960868975415,1.06730766284929,1.25937250101887,0,0,0,0,0,1.10926203050036,1.23947520928483,4.69158467208491,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0.309706370895104,0,0,0.47296445977717,0,0,1.35426486594342,0,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0.852449501065388,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0.263384084775077,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0.541607727530031,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0,0.506039384039006,0,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0.767175371061182,0.722878304769133,0,0.579386075843295,0.795285947051099,0,0.850813354476611,1.55210578223795,0.966182642624386,2.61958150995425,0,0.741568885568859,1.62273696827342,1.56716763569341,0.797747763113191,0,0,0,0.79504962946682,0,0.694281003215189,1.13061588384802,0,0.275118041940067,0.626984899610432,0.775250277507987,0.71153252537342,0.33472061276467,1.20848795132744,0.760272105718513,0,0.735326160691737,0,0.892997282840798,0.44905874525234,0.112611480483322,1.53316637465883,0.949265659568129,0.549605231791222,0,0,0,0.496971951695318,1.64619665163954,1.85372853138506,0.860509862246441,1.06400514659507,0.560677600142307,3.20246987189115,1.2333377420858,0.622422070799533,0.67355336034844,0.817309515567294,0,0,0.234321431833797,1.5608003841516,0.570471821544449,0.448346041655403,1.40921398372518,1.45685649931318,2.10676210053373,1.83738754129404,1.10550885580591,0.413303124703062,0,0.989067717114227,0,0.718618141816238,2.02003336744879,1.25118519871964,1.10825646193673,0,0.30648779579902,0.150238058906597,1.47461838108027,0.358779271377724,0.213557388818567,0.423863802319124,0,0.515262646192195,0,0.930584281657949,1.0126579934476,1.07180705677318,0.252433774244115,0.276149695926898,0.161646056818812,0.710019185033229,1.61203357164224,1.01736355386293,3.47869535693934,2.45471508531751,1.72082757233402,1.46368447355514,1.06023814657188,0.813357600086629,0.518305275076852,1.26160425437814,0.72995471815166,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0.71181185733329,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.686271241194102,3.40225884766739,0,1.60846355858609,0.185176890317059,0,0,1.44331342025273,0.695582429850461,0.352226082707465,0.433099343283221,1.38895653772983,0.951270761172991,0,0,0.246217006087397,0.234004265139238,0.148631162288728,4.68669169933885,3.02367830757947,1.55952606966625,1.16426079513703,1.74380363108377,0.766765358330422,0.985326475791887,0.264145302039678,0,0,0.6312121671319,2.22242630022592,0.763976851116555,0,0,0.411309970813294,0.901029173531752,0.571652865261156,0.112131084345361,0.87192013766656,1.39342743059805,1.16344544182,0,0,0,2.08014873822732,0.257207374262142,0,0,0.428933980974443,0,0,0,0.355391948742546,0,2.41151501647669,9.58686804460323,1.59956785891291,0,0,0,2.39624855491583,0,0,2.75084482668401,0.821905290201534,0.179060963239896,0,0,0,0,4.57370323600434,0,0,1.50764638800914,0.637938751653163,0,0,0,0.12269149171914,0,0,0.415941723061614,0.356857977594324,1.41932173530541,0.117141414992713,0,0,0,1.99267679560631,0.553107505625109,0.955719759148911,0,0,0,0,0,0.303127571446259,0,0,0.992431231275107,0.306923946576125,0,0.512556597022804,1.02341449813341,0.965123526861645,0,1.54209693802656,1.9531789784444,1.39616165223476,0.519254429183621,1.04589340613963,0.120859449591622,2.00506470303285,0.276242966807689,1.37777337797528,0.546273504020151,0.655622074797121,0,0.539107359730903,0.784349769176855,1.46139224653261,0.73886140225013,0,0.170093705276516,1.0795795805107,0,0,0,0.509752546090077,0.831076008928724,0.895499018888713,0.438519753291869,0,1.28225062558195,0.656029291399411,1.95227036798582,0.412164046590889,2.47237555009527,2.80532299729999,0,0.650060246036521,1.6068392984416,0.96670718292122,0.924291702687866,0.614014698904518,0.551346289938122,0.644521469209642,0.870100163485371,1.44885266607372,0.534192213880424,1.81813406897076,0.768760269460425,1.14851441245126,0.6069466851333,2.32422774648643,0,0.6970372701606,0.616067160352178,1.06461206063404,1.73986598415015,1.48259375283136,3.43499728180779,0.744316738719335,1.2655176988749,0.571890581771475,0.255897791311334,0,0,0,1.07923474549989,1.09814811894422,0.706874414074119,0,3.17020642346017,1.68503382495592,0,0.974853958525138,1.056501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| ||
|short_description=p6@HSPH1 | |||
}} | }} |
Latest revision as of 03:12, 17 September 2015
Short description: | p6@HSPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HSPH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000438061, uc001utl.2, uc010aax.1, uc010aay.1, uc010tds.1, uc010tdt.1_5end |
EntrezGene: | HSPH1 |
HGNC: | 16969 |
UniProt: | E7EUG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.69e-07 | 72 |
neural cell | 7.81e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 1.48e-12 | 32 |
ectoderm-derived structure | 7.06e-12 | 171 |
ectoderm | 7.06e-12 | 171 |
presumptive ectoderm | 7.06e-12 | 171 |
telencephalon | 2.14e-11 | 34 |
nervous system | 2.28e-11 | 89 |
regional part of telencephalon | 3.48e-11 | 32 |
cerebral cortex | 5.79e-11 | 25 |
pallium | 5.79e-11 | 25 |
regional part of forebrain | 3.13e-10 | 41 |
forebrain | 3.13e-10 | 41 |
anterior neural tube | 3.13e-10 | 41 |
future forebrain | 3.13e-10 | 41 |
brain grey matter | 3.89e-10 | 34 |
gray matter | 3.89e-10 | 34 |
neocortex | 3.72e-09 | 20 |
central nervous system | 4.16e-09 | 81 |
regional part of cerebral cortex | 5.07e-09 | 22 |
ecto-epithelium | 5.62e-09 | 104 |
brain | 7.62e-09 | 68 |
future brain | 7.62e-09 | 68 |
regional part of nervous system | 1.03e-08 | 53 |
regional part of brain | 1.03e-08 | 53 |
structure with developmental contribution from neural crest | 2.73e-08 | 132 |
neural tube | 7.99e-08 | 56 |
neural rod | 7.99e-08 | 56 |
future spinal cord | 7.99e-08 | 56 |
neural keel | 7.99e-08 | 56 |
pre-chordal neural plate | 4.69e-07 | 61 |