FFCP PHASE1:Hg19::chr12:90256830..90256843,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:90256830..90256843,+ | |||
|coexpression_cluster_id=C450 | |||
|description=CAGE_peak_at_chr12:90256830..90256843,+ | |||
|id=chr12:90256830..90256843,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.24e-76!140;CL:0002087!1.02e-67!119;CL:0000037!6.40e-67!172;CL:0000566!6.40e-67!172;CL:0002057!1.76e-63!42;CL:0002032!1.99e-62!165;CL:0000837!1.99e-62!165;CL:0000988!5.54e-62!182;CL:0002031!1.54e-61!124;CL:0000860!2.20e-58!45;CL:0000766!2.37e-52!76;CL:0002009!3.18e-44!65;CL:0002194!1.81e-43!63;CL:0000576!1.81e-43!63;CL:0000040!1.81e-43!63;CL:0000559!1.81e-43!63;CL:0000557!2.52e-41!71;CL:0000763!3.56e-40!112;CL:0000049!3.56e-40!112;CL:0000839!9.11e-40!70;CL:0000134!2.82e-20!358;CL:0002320!1.86e-19!365;CL:0002393!2.28e-19!9;CL:0002397!2.28e-19!9;CL:0000838!2.42e-19!52;CL:0000542!7.92e-19!53;CL:0000051!7.92e-19!53;CL:0000219!1.41e-16!390;CL:0000945!2.82e-15!24;CL:0000826!2.82e-15!24;CL:0000034!7.28e-14!444;CL:0000048!8.96e-14!430;CL:0000094!2.71e-13!8;CL:0000723!2.79e-13!436;CL:0000236!5.16e-12!14;CL:0000081!2.90e-09!11;CL:0000791!5.18e-08!18;CL:0000789!5.18e-08!18;CL:0002420!5.18e-08!18;CL:0002419!5.18e-08!18;CL:0000790!5.18e-08!18;CL:0000767!1.52e-07!3;CL:0000875!2.30e-07!3;CL:0002396!2.30e-07!3;CL:0000842!3.54e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.30e-30;33!CL:0002057;4.30e-30;33!CL:0000576;4.90e-30;48!CL:0000766;8.69e-26;69!CL:0002393;1.23e-22;6!CL:0002397;1.23e-22;6!CL:0000094;2.48e-22;8!CL:0000473;1.67e-19;39!CL:0000234;1.67e-19;39!CL:0000081;6.19e-16;11!CL:0002087;8.55e-15;104!CL:0000767;5.55e-12;3!CL:0000236;8.50e-12;13!CL:0000875;1.29e-11;3!CL:0002396;1.29e-11;3!CL:0000738;2.67e-11;136!CL:0000226;2.75e-11;3!CL:0000842;2.75e-11;3!CL:0000763;2.41e-10;100!CL:0000771;7.94e-09;2!CL:0000988;2.13e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.19e-58,42;CL:0002057,2.19e-58,42;CL:0000766,4.52e-51,72;CL:0000738,1.35e-50,136;CL:0000473,3.73e-50,48;CL:0000234,3.73e-50,48;CL:0000037,7.25e-41,168;CL:0002087,3.33e-40,115;CL:0002009,3.51e-40,61;CL:0002194,1.23e-38,59;CL:0000576,1.23e-38,59;CL:0000040,1.23e-38,59;CL:0000559,1.23e-38,59;CL:0000988,3.13e-38,177;CL:0000557,5.82e-36,67;CL:0002032,3.88e-35,161;CL:0000837,3.88e-35,161;CL:0000839,7.90e-34,66;CL:0002031,8.21e-34,120;CL:0000763,2.27e-33,108;CL:0000049,2.27e-33,108;CL:0002393,1.40e-32,9;CL:0002397,1.40e-32,9;CL:0000094,2.57e-22,8;CL:0000081,6.36e-16,11;CL:0000134,1.53e-13,354;CL:0002320,4.60e-13,361;CL:0000767,5.67e-12,3;CL:0000875,1.16e-11,3;CL:0002396,1.16e-11,3;CL:0000219,2.24e-11,386;CL:0000226,2.44e-11,3;CL:0000842,2.44e-11,3;CL:0000236,9.89e-11,14;CL:0000048,2.56e-09,427;CL:0000723,4.92e-09,433;CL:0000771,7.96e-09,2;CL:0000034,1.14e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-41;42!CL:0000049;8.87e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.77e-52!102;UBERON:0003061!8.77e-52!102;UBERON:0002193!1.30e-45!112;UBERON:0002371!5.18e-39!80;UBERON:0001474!2.46e-35!86;UBERON:0004765!4.52e-28!101;UBERON:0001434!4.52e-28!101;UBERON:0002405!1.57e-25!115;UBERON:0002384!2.43e-18!375;UBERON:0003081!2.09e-16!216;UBERON:0000178!1.09e-14!15;UBERON:0000179!1.09e-14!15;UBERON:0000463!1.09e-14!15;UBERON:0002204!1.15e-12!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.23e-21;15!UBERON:0000179;4.23e-21;15!UBERON:0000463;4.23e-21;15!UBERON:0002390;1.34e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.47e-49,98;UBERON:0003061,1.47e-49,98;UBERON:0002193,4.33e-44,108;UBERON:0002371,2.62e-33,76;UBERON:0001474,2.46e-30,82;UBERON:0002405,8.45e-28,93;UBERON:0004765,5.52e-27,90;UBERON:0001434,1.51e-23,100;UBERON:0000178,2.75e-21,15;UBERON:0000179,2.75e-21,15;UBERON:0000463,2.75e-21,15;UBERON:0003081,6.41e-19,203;UBERON:0002384,2.07e-12,371;UBERON:0002204,3.46e-11,167;UBERON:0000926,8.14e-09,315;UBERON:0004120,8.14e-09,315;UBERON:0006603,8.14e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.0787107813136792,9.04737836752479,5.75744097145819,5.26374819274658,0,0,0,0.0774672005803016,0,2.05520307534393,14.9578760303607,6.21687787157439,12.1526087600877,0,0,0,1.16318591023652,1.51150377475524,0.970336244751265,1.62700325833979,0.411167888021826,0.929119112685311,1.1507695692886,0.512321413058201,3.78371567821736,1.37898272294647,0,0,1.50593871634084,0.272906150057846,0.449446968890169,1.83650335422542,0,0.639337125799041,0.329851300186716,1.39624560335142,1.27867425159808,2.32167390902867,0.56738522469114,1.86846674698672,0.75374599577023,0.521482918420201,2.6062661364614,1.21079900526674,1.84138817993782,2.21523671208619,6.76016916198214,6.37812899895131,9.01532175686016,6.06574608191074,4.95583746376971,4.50031642751824,6.27028036230747,2.58591680358817,4.74926799788048,0,1.09227722252426,3.55803701545422,1.70692089026603,2.00197993518006,2.29900975981793,0,0.954053754535364,0.569212969109448,1.17447437874188,1.14681968437569,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,0.822405995998037,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0.444859689486181,0.267540828089713,0,0,1.14966148080576,1.71813722741315,1.26509846009751,0,0,0,0.602300476311091,0.383959833463255,0,0.473554504088034,0.821127996921047,1.00803371612366,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0,1.15508732651774,0,0,0,0,0,2.24702107184155,0,8.70272578215674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9624326269493,5.82428342210265,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,2.29391162142713,1.70894156152249,0.952927101831156,2.05681136543097,3.8908398671563,3.24018862342869,1.58625035258854,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.0787107813136792,9.04737836752479,5.75744097145819,5.26374819274658,0,0,0,0.0774672005803016,0,2.05520307534393,14.9578760303607,6.21687787157439,12.1526087600877,0,0,0,1.16318591023652,1.51150377475524,0.970336244751265,1.62700325833979,0.411167888021826,0.929119112685311,1.1507695692886,0.512321413058201,3.78371567821736,1.37898272294647,0,0,1.50593871634084,0.272906150057846,0.449446968890169,1.83650335422542,0,0.639337125799041,0.329851300186716,1.39624560335142,1.27867425159808,2.32167390902867,0.56738522469114,1.86846674698672,0.75374599577023,0.521482918420201,2.6062661364614,1.21079900526674,1.84138817993782,2.21523671208619,6.76016916198214,6.37812899895131,9.01532175686016,6.06574608191074,4.95583746376971,4.50031642751824,6.27028036230747,2.58591680358817,4.74926799788048,0,1.09227722252426,3.55803701545422,1.70692089026603,2.00197993518006,2.29900975981793,0,0.954053754535364,0.569212969109448,1.17447437874188,1.14681968437569,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,0.822405995998037,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0.444859689486181,0.267540828089713,0,0,1.14966148080576,1.71813722741315,1.26509846009751,0,0,0,0.602300476311091,0.383959833463255,0,0.473554504088034,0.821127996921047,1.00803371612366,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0,1.15508732651774,0,0,0,0,0,2.24702107184155,0,8.70272578215674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9624326269493,5.82428342210265,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,2.29391162142713,1.70894156152249,0.952927101831156,2.05681136543097,3.8908398671563,3.24018862342869,1.58625035258854,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:90256830..90256843,+ | |||
}} | }} |
Latest revision as of 13:24, 24 July 2015
Short description: | p@chr12:90256830..90256843, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:90256830..90256843, + |
Coexpression cluster: | C450_Eosinophils_Basophils_CD14_Neutrophils_CD14CD16_Peripheral_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.47e-49 | 98 |
blood island | 1.47e-49 | 98 |
hemolymphoid system | 4.33e-44 | 108 |
bone marrow | 2.62e-33 | 76 |
bone element | 2.46e-30 | 82 |
immune system | 8.45e-28 | 93 |
skeletal element | 5.52e-27 | 90 |
skeletal system | 1.51e-23 | 100 |
blood | 2.75e-21 | 15 |
haemolymphatic fluid | 2.75e-21 | 15 |
organism substance | 2.75e-21 | 15 |
lateral plate mesoderm | 6.41e-19 | 203 |
connective tissue | 2.07e-12 | 371 |
musculoskeletal system | 3.46e-11 | 167 |
mesoderm | 8.14e-09 | 315 |
mesoderm-derived structure | 8.14e-09 | 315 |
presumptive mesoderm | 8.14e-09 | 315 |