FFCP PHASE1:Hg19::chr12:8218926..8218980,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:8218926..8218980,- to FFCP PHASE1:Hg19::chr12:8218926..8218980,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=719 | |EntrezGene=719 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1319 | |HGNC=1319 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZE6,A8K2H7,Q16581 | |UniProt=F5GZE6,A8K2H7,Q16581 | ||
|association_with_transcript=0bp_to_ENST00000546241,NM_004054,uc001qtv.1_5end | |||
|cluster_id=chr12:8218926..8218980,- | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_1_at_C3AR1_5end | |||
|id=chr12:8218926..8218980,- | |||
|ontology_enrichment_celltype=CL:0000766!1.40e-37!76;CL:0000839!9.12e-33!70;CL:0000763!1.10e-31!112;CL:0000049!1.10e-31!112;CL:0000557!1.13e-30!71;CL:0002057!1.20e-29!42;CL:0002194!1.40e-29!63;CL:0000576!1.40e-29!63;CL:0000040!1.40e-29!63;CL:0000559!1.40e-29!63;CL:0002009!1.40e-28!65;CL:0000037!3.86e-26!172;CL:0000566!3.86e-26!172;CL:0000860!8.90e-26!45;CL:0000738!2.38e-25!140;CL:0002032!4.42e-25!165;CL:0000837!4.42e-25!165;CL:0002031!2.08e-22!124;CL:0000988!2.42e-22!182;CL:0002087!1.04e-20!119;CL:0002393!6.47e-07!9;CL:0002397!6.47e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.09e-26;33!CL:0002057;2.09e-26;33!CL:0000473;3.19e-26;39!CL:0000234;3.19e-26;39!CL:0000576;2.75e-23;48!CL:0000766;3.62e-21;69!CL:0000763;5.56e-12;100!CL:0002087;5.54e-08;104!CL:0000738;2.91e-07;136!CL:0000094;4.99e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.56e-48,72;CL:0000839,1.51e-42,66;CL:0000473,8.77e-41,48;CL:0000234,8.77e-41,48;CL:0000557,2.59e-40,67;CL:0002194,1.05e-38,59;CL:0000576,1.05e-38,59;CL:0000040,1.05e-38,59;CL:0000559,1.05e-38,59;CL:0002009,1.43e-37,61;CL:0000763,2.86e-37,108;CL:0000049,2.86e-37,108;CL:0000860,1.25e-35,42;CL:0002057,1.25e-35,42;CL:0000738,4.74e-30,136;CL:0000037,7.49e-29,168;CL:0002032,6.34e-28,161;CL:0000837,6.34e-28,161;CL:0002031,7.54e-27,120;CL:0000988,2.97e-25,177;CL:0002087,8.89e-25,115;CL:0002393,4.69e-08,9;CL:0002397,4.69e-08,9;CL:0000094,5.19e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-25;42!CL:0000049;4.61e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-40!115;UBERON:0002390!4.56e-32!102;UBERON:0003061!4.56e-32!102;UBERON:0002193!2.40e-28!112;UBERON:0002371!2.91e-27!80;UBERON:0001474!1.91e-24!86;UBERON:0004765!8.52e-20!101;UBERON:0001434!8.52e-20!101;UBERON:0002405!1.38e-18!115;UBERON:0001049!8.70e-15!57;UBERON:0005068!8.70e-15!57;UBERON:0006241!8.70e-15!57;UBERON:0007135!8.70e-15!57;UBERON:0002616!1.63e-12!59;UBERON:0003080!4.55e-12!42;UBERON:0002780!1.34e-11!41;UBERON:0001890!1.34e-11!41;UBERON:0006240!1.34e-11!41;UBERON:0000955!1.80e-11!69;UBERON:0006238!1.80e-11!69;UBERON:0003081!1.31e-10!216;UBERON:0001017!2.82e-10!82;UBERON:0005743!1.95e-09!86;UBERON:0001893!2.49e-09!34;UBERON:0002020!2.51e-09!34;UBERON:0003528!2.51e-09!34;UBERON:0003075!2.96e-09!86;UBERON:0007284!2.96e-09!86;UBERON:0002791!4.43e-09!33;UBERON:0002204!1.23e-08!167;UBERON:0002346!1.39e-08!90;UBERON:0000073!1.53e-08!94;UBERON:0001016!1.53e-08!94;UBERON:0001869!2.25e-08!32;UBERON:0002619!6.81e-08!22;UBERON:0001950!5.12e-07!20;UBERON:0003056!5.51e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.69e-12;114!UBERON:0002780;3.35e-10;41!UBERON:0001890;3.35e-10;41!UBERON:0003528;2.77e-09;34!UBERON:0002020;2.77e-09;34!UBERON:0001893;3.65e-09;34!UBERON:0000073;3.95e-09;53!UBERON:0002616;3.95e-09;53!UBERON:0002791;5.23e-09;32!UBERON:0001869;9.80e-09;32!UBERON:0002619;1.30e-08;22!UBERON:0001950;1.43e-07;20!UBERON:0000956;7.62e-07;25!UBERON:0000203;7.62e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.06e-48,114;UBERON:0002390,3.07e-40,98;UBERON:0003061,3.07e-40,98;UBERON:0002193,1.57e-35,108;UBERON:0002371,2.70e-34,76;UBERON:0002405,3.24e-31,93;UBERON:0001474,1.89e-30,82;UBERON:0004765,7.76e-26,90;UBERON:0001434,2.30e-21,100;UBERON:0001049,1.94e-16,56;UBERON:0005068,1.94e-16,56;UBERON:0006241,1.94e-16,56;UBERON:0007135,1.94e-16,56;UBERON:0000073,6.75e-15,53;UBERON:0002616,6.75e-15,53;UBERON:0003081,9.18e-14,203;UBERON:0002780,1.02e-13,41;UBERON:0001890,1.02e-13,41;UBERON:0003080,1.02e-13,41;UBERON:0006240,1.02e-13,41;UBERON:0001893,5.74e-11,34;UBERON:0003528,5.80e-11,34;UBERON:0002020,5.80e-11,34;UBERON:0000955,1.54e-10,68;UBERON:0006238,1.54e-10,68;UBERON:0001017,3.07e-10,81;UBERON:0002791,4.31e-10,32;UBERON:0001869,8.25e-10,32;UBERON:0001016,1.04e-09,89;UBERON:0003075,2.11e-09,82;UBERON:0007284,2.11e-09,82;UBERON:0002346,1.16e-08,86;UBERON:0002619,1.19e-08,22;UBERON:0001950,1.31e-07,20;UBERON:0002204,1.32e-07,167;UBERON:0003056,5.77e-07,61;UBERON:0000956,7.09e-07,25;UBERON:0000203,7.09e-07,25 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,10.0848771967766,0,0,0,0.61560529038394,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,9.04737836752479,15.3531759238885,28.1765344435258,0,0.30120591877825,0,0.309868802321207,0,1.46800219667424,18.8358438900838,28.8784004357004,17.1438587865523,353.78644929908,287.293681758835,366.014881608179,74.7346947326963,191.205227506538,120.806862471532,212.672568768701,458.452195144336,439.783046671047,208.576984433559,470.311057187429,448.843272328535,116.524040088977,300.150377866479,273.56150292057,144.381874429178,426.279406390355,446.975010561273,174.467818651414,542.370055758598,373.37288146664,47.8284385270738,222.202514590498,141.506617176854,176.447217086179,480.007900088704,356.254326425469,135.674279238641,368.688423323082,348.588095751712,161.641667203109,527.373574734193,431.971158856807,104.148856151787,116.719760680809,119.715086585283,36.1698192291714,60.9718184936516,54.4859738903102,177.562939350798,201.502594002678,176.818900844166,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0,0,0,1.1384259382189,1.17447437874188,0.382273228125229,0,6.72610275577843,1.84368859342554,1.180258620683,1.17903228824749,2.46721798799411,13.0405466404729,0.651844533267181,1.89379122293893,0,31.1949279278486,7.9543595018206,9.30442357251209,8.6657236404805,32.5351952103215,33.0350742802091,7.07082989795807,5.25065033793112,4.05724320029073,0.741432815810302,0.802622484269139,0,10.7643875562688,4.98186641682498,5.15441168223945,5.06039384039006,3.50421955756506,2.60433381542567,1.90090408889675,5.27012916772205,5.50342427963999,4.99722906209383,4.73554504088034,4.92676798152628,4.23374160771938,3.20928234940209,2.17236605824198,0,1.34140171940727,0.12786256184353,0,0,0.144846518960824,4.7717156823066,0,0.850813354476611,0.886917589850256,0.966182642624386,7.98972360536047,0,0,1.29818957461873,1.21890816109487,12.8969221703299,3.33886874027479,1.14398982156026,0.74291500265913,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,1.62028389576352,0.0892997282840798,0,0,0,0,0,129.144809087342,492.480935468373,0.436094052142534,0.496971951695318,0.379891534993739,0.132409180813219,0.286836620748814,2.83734705758686,0,0,0.49333509683432,0.622422070799533,0.404132016209064,0.490385709340376,0.151357427644931,0.576175924479999,0,0.624320153660641,0,0,0.23486899728753,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0,0.554128230968366,0,0,0.150238058906597,0.567160915800105,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0.710019185033229,0.201504196455281,0.169560592310488,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,7.86261773342101,10.6342183202653,0,0,0.514703430895577,0.329250856225877,0,0,0.0925884451585296,0,0,0,0.927443239800615,1.6437217193015,0.144366447761074,0.925971025153221,0,0,0,298.9074453901,72.7753264583029,164.8319589782,0.93733833986777,1.00789276919316,0.850650583454319,0,0,0,34.979089890612,130.047537037535,31.5138735621974,86.7602119570108,35.7266086596655,0.190493682876507,0.763976851116555,0,1.71072446022705,0.102827492703324,2.10240140490742,0,0.224262168690721,0,0.4400297149257,1.68053230485111,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,6.33022691825131,3.48613383440118,4.39881161201051,277.302219861914,310.394882505054,250.892387984808,0,0,0,0,0,0.358121926479791,1.2329365839288,5.12279976525011,5.60631694634745,5.13372145118993,0,0,0,3.35032530668698,0,74.1516953707711,68.8071356169257,96.9732301440323,0,0,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0,0,0,11.5790094628817,21.7871342826803,10.8862108959513,0,0,0,0,0,0,0,0,0,0,1.07946785661859,0.177561725313127,0.739144404124282,1.55776328755086,0.929683027679674,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0,0,0.223874754722178,2.41185864310528,1.3071772551245,0,0,0,29.675811354544,0,0.082509499920588,1.14853107599234,0,0,0,0,0,0,0.107420244868274,0,0.255679882248303,0.0890320356467374,0.495854746082934,0,0,0.10115778085555,0,0,0.6970372701606,0.924100740528266,0,0,0,0.143124886741991,0.372158369359667,0,0.762520775695299,0,0,0,0.78494864019923,0,0,0,0.606547444719948,0,1.68503382495592,0,5.60541026151954,0,0,0,0,0.551365343546124,0,0,0.578775534266688,0,0.608731130888112,0.6196469961995,1.12678241012897,0.430234056612155,0,0,0.709522128141196,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,1.34060455107157,0,33.1386178734263,0,0,0,0,12.6861902308042,13.7634697285628,12.5322381178316,15.4850654047563,17.6885777427064,14.9148861574325,12.9607544937148,6.34500141035416,0,0,0,0,0,0,0.318852545457645,5.9873811429845,0.957526850661834,1.05836791361941,8.764792387413,4.49275484981534,0,4.85707676896372,17.5444133963047,0,0.321176150207399,0.201799707191048,0,7.21361223987106,0.307240764308458,0.671028323677248,1.16794399198336,3.321597621834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| ||
|short_description=p1@C3AR1 | |||
}} | }} |
Latest revision as of 02:16, 25 September 2015
Short description: | p1@C3AR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C3AR1_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | 0bp_to_ENST00000546241, NM_004054, uc001qtv.1_5end |
EntrezGene: | C3AR1 |
HGNC: | 1319 |
UniProt: | F5GZE6A8K2H7Q16581 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.56e-48 | 72 |
myeloid lineage restricted progenitor cell | 1.51e-42 | 66 |
defensive cell | 8.77e-41 | 48 |
phagocyte | 8.77e-41 | 48 |
granulocyte monocyte progenitor cell | 2.59e-40 | 67 |
monopoietic cell | 1.05e-38 | 59 |
monocyte | 1.05e-38 | 59 |
monoblast | 1.05e-38 | 59 |
promonocyte | 1.05e-38 | 59 |
macrophage dendritic cell progenitor | 1.43e-37 | 61 |
myeloid cell | 2.86e-37 | 108 |
common myeloid progenitor | 2.86e-37 | 108 |
classical monocyte | 1.25e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-35 | 42 |
leukocyte | 4.74e-30 | 136 |
hematopoietic stem cell | 7.49e-29 | 168 |
hematopoietic oligopotent progenitor cell | 6.34e-28 | 161 |
hematopoietic multipotent progenitor cell | 6.34e-28 | 161 |
hematopoietic lineage restricted progenitor cell | 7.54e-27 | 120 |
hematopoietic cell | 2.97e-25 | 177 |
nongranular leukocyte | 8.89e-25 | 115 |
intermediate monocyte | 4.69e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.69e-08 | 9 |
granulocyte | 5.19e-07 | 8 |