FFCP PHASE1:Hg19::chr12:71551821..71551832,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7103 | |EntrezGene=7103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11855 | |HGNC=11855 | ||
|TSSclassifier=strong | |||
|UniProt=P19075 | |UniProt=P19075 | ||
|association_with_transcript=-42bp_to_ENST00000550818,NM_004616,uc001swj.1_5end | |||
|cluster_id=chr12:71551821..71551832,- | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_9_at_TSPAN8_5end | |||
|id=chr12:71551821..71551832,- | |||
|ontology_enrichment_celltype=CL:1000306!1.92e-07!4;CL:0002547!1.92e-07!4;CL:0002150!6.92e-07!3;CL:0000861!6.92e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002595;5.75e-16;5!CL:0002553;6.04e-10;1!CL:0000167;8.17e-10;1!CL:0000164;8.17e-10;1!CL:0000502;8.17e-10;1!CL:0000172;8.17e-10;1!CL:0000173;8.17e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,5.76e-16,5;CL:0002553,5.79e-10,1;CL:0000167,8.17e-10,1;CL:0000164,8.17e-10,1;CL:0000502,8.17e-10,1;CL:0000172,8.17e-10,1;CL:0000173,8.17e-10,1;CL:0002351,8.17e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.01e-12;3!UBERON:0003057;3.01e-12;3!CL:0002351;8.17e-10;1!UBERON:0008801;1.68e-09;1!UBERON:0006242;1.68e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;8.17e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,8.17e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.39e-19!115;UBERON:0000025!1.95e-10!194;UBERON:0002298!2.54e-10!8;UBERON:0004111!3.32e-10!241;UBERON:0000477!1.29e-08!286;UBERON:0004573!6.89e-08!33;UBERON:0004571!6.89e-08!33;UBERON:0000481!9.31e-08!347;UBERON:0000415!1.92e-07!4;UBERON:0007240!1.92e-07!4;UBERON:0005742!1.92e-07!4;UBERON:0005734!1.92e-07!4;UBERON:0004664!1.92e-07!4;UBERON:0004663!1.92e-07!4;UBERON:0004921!2.24e-07!129;UBERON:0004185!2.24e-07!129;UBERON:0001049!2.44e-07!57;UBERON:0005068!2.44e-07!57;UBERON:0006241!2.44e-07!57;UBERON:0007135!2.44e-07!57;UBERON:0001007!8.41e-07!155;UBERON:0001555!8.41e-07!155;UBERON:0007026!8.41e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;5.75e-16;5!UBERON:0001533;5.75e-16;5!UBERON:0002240;3.01e-12;3!UBERON:0005174;3.01e-12;3!UBERON:0001137;3.01e-12;3!UBERON:0003513;1.46e-11;7!UBERON:0001831;1.68e-09;1!UBERON:0001567;1.68e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,5.76e-16,5;UBERON:0001533,5.76e-16,5;UBERON:0002240,3.01e-12,3;UBERON:0005174,3.01e-12,3;UBERON:0001137,3.01e-12,3;UBERON:0003513,1.46e-11,7;UBERON:0001831,2.67e-09,1;UBERON:0001567,2.67e-09,1;UBERON:0008801,2.67e-09,1 | |||
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| ||
|short_description=p9@TSPAN8 | |||
}} | }} |
Latest revision as of 16:39, 24 September 2015
Short description: | p9@TSPAN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TSPAN8_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | -42bp_to_ENST00000550818, NM_004616, uc001swj.1_5end |
EntrezGene: | TSPAN8 |
HGNC: | 11855 |
UniProt: | P19075 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 5.76e-16 | 5 |
lung fibroblast | 5.79e-10 | 1 |
peptide hormone secreting cell | 8.17e-10 | 1 |
enteroendocrine cell | 8.17e-10 | 1 |
type D enteroendocrine cell | 8.17e-10 | 1 |
somatostatin secreting cell | 8.17e-10 | 1 |
pancreatic D cell | 8.17e-10 | 1 |
progenitor cell of endocrine pancreas | 8.17e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 5.76e-16 | 5 |
subclavian artery | 5.76e-16 | 5 |
spinal cord | 3.01e-12 | 3 |
dorsal region element | 3.01e-12 | 3 |
dorsum | 3.01e-12 | 3 |
trunk blood vessel | 1.46e-11 | 7 |
parotid gland | 2.67e-09 | 1 |
cheek | 2.67e-09 | 1 |
parotid gland primordium | 2.67e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 8.17e-10 | 1 |