FFCP PHASE1:Hg19::chr12:69983331..69983347,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:69983331..69983347,+ to FFCP PHASE1:Hg19::chr12:69983331..69983347,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10576 | |EntrezGene=10576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1615 | |HGNC=1615 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000546850_5end | |||
|cluster_id=chr12:69983331..69983347,+ | |||
|coexpression_cluster_id=C153 | |||
|description=CAGE_peak_8_at_CCT2_5end | |||
|id=chr12:69983331..69983347,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.62e-25;4!CL:0002222;1.62e-25;4!CL:0002224;1.62e-25;4!CL:0000746;1.14e-09;3!CL:0002592;1.53e-09;3!CL:0000737;1.44e-07;4!CL:0002494;3.61e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.43e-25,4;CL:0002222,1.43e-25,4;CL:0002224,1.43e-25,4;CL:0000746,1.19e-09,3;CL:0000513,1.19e-09,3;CL:0002592,1.30e-09,3;CL:0000737,1.49e-07,4;CL:0002494,3.44e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000513;1.14e-09;3 | |||
|ontology_enrichment_disease=DOID:162!1.06e-23!235;DOID:14566!6.00e-23!239;DOID:0050687!1.44e-13!143;DOID:0050686!4.61e-12!137;DOID:305!1.38e-09!106;DOID:2531!8.43e-08!51;DOID:0060083!8.43e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.62e-25;4!UBERON:0005389;1.62e-25;4!UBERON:0000484;1.62e-25;4!UBERON:0000965;1.62e-25;4!UBERON:0001803;1.62e-25;4!UBERON:0007625;6.06e-10;11!UBERON:0003498;1.53e-09;3!UBERON:0005985;1.53e-09;3!UBERON:0001621;1.53e-09;3!UBERON:0001801;5.18e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.43e-25,4;UBERON:0005389,1.43e-25,4;UBERON:0000484,1.43e-25,4;UBERON:0002546,1.43e-25,4;UBERON:0000965,1.43e-25,4;UBERON:0001803,1.43e-25,4;UBERON:0003073,1.43e-25,4;UBERON:0005426,1.43e-25,4;UBERON:0000076,2.49e-13,8;UBERON:0007625,5.79e-10,11;UBERON:0001621,1.30e-09,3;UBERON:0001801,5.00e-08,14 | |||
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| ||
|short_description=p8@CCT2 | |||
}} | }} |
Latest revision as of 06:27, 20 September 2015
Short description: | p8@CCT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CCT2_5end |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | -11bp_to_ENST00000546850_5end |
EntrezGene: | CCT2 |
HGNC: | 1615 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.43e-25 | 4 |
vertebrate lens cell | 1.43e-25 | 4 |
lens epithelial cell | 1.43e-25 | 4 |
cardiac muscle cell | 1.19e-09 | 3 |
cardiac muscle myoblast | 1.19e-09 | 3 |
smooth muscle cell of the coronary artery | 1.30e-09 | 3 |
striated muscle cell | 1.49e-07 | 4 |
cardiocyte | 3.44e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.43e-25 | 4 |
transparent eye structure | 1.43e-25 | 4 |
simple cuboidal epithelium | 1.43e-25 | 4 |
cranial placode | 1.43e-25 | 4 |
lens of camera-type eye | 1.43e-25 | 4 |
epithelium of lens | 1.43e-25 | 4 |
lens placode | 1.43e-25 | 4 |
lens vesicle | 1.43e-25 | 4 |
external ectoderm | 2.49e-13 | 8 |
pigment epithelium of eye | 5.79e-10 | 11 |
coronary artery | 1.30e-09 | 3 |
anterior segment of eyeball | 5.00e-08 | 14 |