FFCP PHASE1:Hg19::chr12:6419877..6419905,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:6419877..6419905,+ to FFCP PHASE1:Hg19::chr12:6419877..6419905,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55200 | |EntrezGene=55200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25562 | |HGNC=25562 | ||
|TSSclassifier=strong | |||
|UniProt=F5H731 | |UniProt=F5H731 | ||
|association_with_transcript=0bp_to_ENST00000536531,uc001qns.2_5end | |||
|cluster_id=chr12:6419877..6419905,+ | |||
|description=CAGE_peak_2_at_PLEKHG6_5end | |||
|id=chr12:6419877..6419905,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.08e-16!254;CL:0000223!5.83e-16!59;CL:0002076!2.35e-12!43;CL:0000039!1.44e-07!7;CL:0000586!1.44e-07!7;CL:0002251!2.71e-07!21;CL:0000325!5.65e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.98e-11;7!CL:0000586;5.98e-11;7!CL:0000136;2.05e-09;13!CL:0002322;2.75e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.53e-11,58;CL:0000039,4.66e-11,7;CL:0000586,4.66e-11,7;CL:0000066,4.61e-08,253;CL:0002076,4.86e-08,42;CL:0000136,7.74e-08,15;CL:0002322,2.07e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;6.11e-07;58 | |||
|ontology_enrichment_disease=DOID:305!8.18e-14!106;DOID:0050687!4.76e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.37e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.17e-22!169;UBERON:0000925!8.17e-22!169;UBERON:0006595!8.17e-22!169;UBERON:0001007!2.76e-19!155;UBERON:0001555!2.76e-19!155;UBERON:0007026!2.76e-19!155;UBERON:0004921!6.47e-19!129;UBERON:0004185!6.47e-19!129;UBERON:0000077!1.72e-17!130;UBERON:0000466!1.10e-13!126;UBERON:0005911!4.32e-11!82;UBERON:0001041!5.58e-11!98;UBERON:0000464!7.31e-11!104;UBERON:0005177!8.05e-09!107;UBERON:0005631!3.78e-08!14;UBERON:0000158!3.78e-08!14;UBERON:0005181!9.22e-08!35;UBERON:0000161!1.63e-07!35;UBERON:0001004!1.90e-07!72;UBERON:0005178!2.42e-07!34;UBERON:0002224!2.42e-07!34;UBERON:0005409!4.48e-07!35;UBERON:0009569!4.96e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;6.57e-18;33!UBERON:0005409;8.29e-14;22!UBERON:0000160;5.53e-12;17!UBERON:0005631;2.26e-10;10!UBERON:0000158;2.26e-10;10!UBERON:0001555;5.30e-08;54!UBERON:0001041;2.31e-07;14!UBERON:0000059;3.64e-07;11!UBERON:0001007;7.60e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,2.65e-17,118;UBERON:0001007,5.85e-14,145;UBERON:0001555,5.85e-14,145;UBERON:0007026,5.85e-14,145;UBERON:0004119,9.43e-14,160;UBERON:0000925,9.43e-14,160;UBERON:0006595,9.43e-14,160;UBERON:0000160,5.30e-12,17;UBERON:0005409,1.07e-11,25;UBERON:0005631,5.80e-11,14;UBERON:0000158,5.80e-11,14;UBERON:0001041,8.33e-08,87;UBERON:0000059,3.35e-07,11 | |||
|phase1_expression=0.181678379270557,2.35510576280081,0.986680828671798,0,2.68176656656373,0,17.7309914717817,1.26343974685366,5.48489819219661,1.22866968250754,4.88460817580699,1.74753097704138,2.37390280405608,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.382067028739756,0.656804715599566,0.236132343941038,0,0,0.154816123316076,1.83884244895785,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,5.10013403609559,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.286804595389004,2.19552671033272,3.5783037446801,3.02104251460748,1.96956004529204,1.7662459561294,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,1.96565443335525,0.590789906681404,0,16.234473887691,0,0.219500570817251,3.37205259772859,0.100528972411631,0.462942225792648,0,0,0,0.34779121492523,0,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.839910640994298,0.283550194484773,0.0895585227028483,0,0,0,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,2.00068208423871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24378600024763,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,8.46016147141356,1.60405176242628,2.11786274552562,0,0,0,1.80479845162965,0.539107359730903,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0.764628819135115,0,0,0,0,1.02580050046556,1.31205858279882,0.325378394664303,2.88514832613622,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0.384888450902048,0.670302275535787,3.26672954583968,3.10674542563371,0.86101074534246,0,4.43430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61996756571508,2.93016358543788,0,0,0,20.2932812027036,13.957339999134,16.2795172112593,0,0,0,0,0.63337622438398,0.398495976502139,7.18338180380984,0.755798243562828,0,0,0,0.359473404589307,0.537063524026827,0,1.1837208676432,0,0,0,0,0,0,0.174919999992391,6.52499617891314,3.41380344856499,1.27126825146383,7.56440581657396,0,0,0.347249989866585,0,0,0,0,0,0,0,4.87983104975112,0.846452843541768,0,2.76676685265672,11.3992208400411,4.78048436456836,18.5020672644513,8.06058821936388,16.5240780565777,0,0,0,0,0,0,0,0,0,1.79556088975062,4.80600442875399,0,20.9005005526486,21.6721033033181,11.6095727537389,0,0,0,0,0.802577647298789,0,0,6.84826166262314,0,0,13.308978765353,0.30607276163049,0,0.450970258243478,0.103688191397247,0,0,0,0,0.569219092059585,0,1.90915712168644,0,0.34823682632161,0.17472666824203,0,0,0,0,4.75246180793255,0,1.35588444468319,0,0,0,5.47543871657448,0.0801588202515337,4.69596588426576,9.79067086952438,0.432271251462318,0,0.171594997861965,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,2.59582700648688,0.429226048136571,0,0.0671834724867263,0,3.49487848582361,1.10296455230113,1.483485450861,1.28066733322951,0.196854963029498,0,0,0,2.41129722697529,1.92555211236127,1.66176135211674,0.449947783103001,6.1904156364636,0,0,0.236417121897595,1.52118305591495,0,0,0.767660789277781,1.42939065274673,0,0,0,0,0,0,0,0,0,0.58620893471233,2.65013777824443,0,0,0,4.9337051562167,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,2.55336503108073,14.1444628876063,20.055191521816,26.9584107551846,20.3281031040079,1.57054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,1.32864840313363,0.817826971279221,0,0,0.422624246717254,0,0,0,0,0,1.67855409263333,1.24415452006595,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0,1.41563668017288,0,1.61735932610474,0,0,0,0.150420656698515,0,1.56302802246618,2.61906694481422,0,2.36569737947272,0,0,0,0,0,1.64477330057155,1.48863353516788,0,2.6830109804315,0,0,0.606965604236632,0.91064876540519,13.5714626348837,0,0,0,0,0.118193840883968,0.667388411352415,0.863424021355654,0,3.36326595976547,3.65263488203798,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,4.14755797088455,2.15113679410139,0,0.0852134047591577,0,3.89481676524885,0,0,4.69792813550728,5.10381214799263,4.02329152441489,0,0,1.1598144313382,2.4285549652957,2.80727356154527,1.98950775161368,0,0.45178432815584,0,1.05673990496671,31.2555340337176,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| |phase1_expression=0.181678379270557,2.35510576280081,0.986680828671798,0,2.68176656656373,0,17.7309914717817,1.26343974685366,5.48489819219661,1.22866968250754,4.88460817580699,1.74753097704138,2.37390280405608,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.382067028739756,0.656804715599566,0.236132343941038,0,0,0.154816123316076,1.83884244895785,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,5.10013403609559,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.286804595389004,2.19552671033272,3.5783037446801,3.02104251460748,1.96956004529204,1.7662459561294,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,1.96565443335525,0.590789906681404,0,16.234473887691,0,0.219500570817251,3.37205259772859,0.100528972411631,0.462942225792648,0,0,0,0.34779121492523,0,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.839910640994298,0.283550194484773,0.0895585227028483,0,0,0,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,2.00068208423871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24378600024763,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,8.46016147141356,1.60405176242628,2.11786274552562,0,0,0,1.80479845162965,0.539107359730903,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0.764628819135115,0,0,0,0,1.02580050046556,1.31205858279882,0.325378394664303,2.88514832613622,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0.384888450902048,0.670302275535787,3.26672954583968,3.10674542563371,0.86101074534246,0,4.43430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61996756571508,2.93016358543788,0,0,0,20.2932812027036,13.957339999134,16.2795172112593,0,0,0,0,0.63337622438398,0.398495976502139,7.18338180380984,0.755798243562828,0,0,0,0.359473404589307,0.537063524026827,0,1.1837208676432,0,0,0,0,0,0,0.174919999992391,6.52499617891314,3.41380344856499,1.27126825146383,7.56440581657396,0,0,0.347249989866585,0,0,0,0,0,0,0,4.87983104975112,0.846452843541768,0,2.76676685265672,11.3992208400411,4.78048436456836,18.5020672644513,8.06058821936388,16.5240780565777,0,0,0,0,0,0,0,0,0,1.79556088975062,4.80600442875399,0,20.9005005526486,21.6721033033181,11.6095727537389,0,0,0,0,0.802577647298789,0,0,6.84826166262314,0,0,13.308978765353,0.30607276163049,0,0.450970258243478,0.103688191397247,0,0,0,0,0.569219092059585,0,1.90915712168644,0,0.34823682632161,0.17472666824203,0,0,0,0,4.75246180793255,0,1.35588444468319,0,0,0,5.47543871657448,0.0801588202515337,4.69596588426576,9.79067086952438,0.432271251462318,0,0.171594997861965,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,2.59582700648688,0.429226048136571,0,0.0671834724867263,0,3.49487848582361,1.10296455230113,1.483485450861,1.28066733322951,0.196854963029498,0,0,0,2.41129722697529,1.92555211236127,1.66176135211674,0.449947783103001,6.1904156364636,0,0,0.236417121897595,1.52118305591495,0,0,0.767660789277781,1.42939065274673,0,0,0,0,0,0,0,0,0,0.58620893471233,2.65013777824443,0,0,0,4.9337051562167,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,2.55336503108073,14.1444628876063,20.055191521816,26.9584107551846,20.3281031040079,1.57054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,1.32864840313363,0.817826971279221,0,0,0.422624246717254,0,0,0,0,0,1.67855409263333,1.24415452006595,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0,1.41563668017288,0,1.61735932610474,0,0,0,0.150420656698515,0,1.56302802246618,2.61906694481422,0,2.36569737947272,0,0,0,0,0,1.64477330057155,1.48863353516788,0,2.6830109804315,0,0,0.606965604236632,0.91064876540519,13.5714626348837,0,0,0,0,0.118193840883968,0.667388411352415,0.863424021355654,0,3.36326595976547,3.65263488203798,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,4.14755797088455,2.15113679410139,0,0.0852134047591577,0,3.89481676524885,0,0,4.69792813550728,5.10381214799263,4.02329152441489,0,0,1.1598144313382,2.4285549652957,2.80727356154527,1.98950775161368,0,0.45178432815584,0,1.05673990496671,31.2555340337176,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| ||
|short_description=p2@PLEKHG6 | |||
}} | }} |
Latest revision as of 19:48, 19 September 2015
Short description: | p2@PLEKHG6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLEKHG6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536531, uc001qns.2_5end |
EntrezGene: | PLEKHG6 |
HGNC: | 25562 |
UniProt: | F5H731 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.53e-11 | 58 |
germ line cell | 4.66e-11 | 7 |
germ cell | 4.66e-11 | 7 |
epithelial cell | 4.61e-08 | 253 |
endo-epithelial cell | 4.86e-08 | 42 |
fat cell | 7.74e-08 | 15 |
embryonic stem cell | 2.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 2.65e-17 | 118 |
digestive system | 5.85e-14 | 145 |
digestive tract | 5.85e-14 | 145 |
primitive gut | 5.85e-14 | 145 |
endoderm-derived structure | 9.43e-14 | 160 |
endoderm | 9.43e-14 | 160 |
presumptive endoderm | 9.43e-14 | 160 |
intestine | 5.30e-12 | 17 |
gastrointestinal system | 1.07e-11 | 25 |
extraembryonic membrane | 5.80e-11 | 14 |
membranous layer | 5.80e-11 | 14 |
foregut | 8.33e-08 | 87 |
large intestine | 3.35e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.37e-10 | 106 |