FFCP PHASE1:Hg19::chr12:57638896..57638928,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:57638896..57638928,- | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_at_chr12:57638896..57638928,- | |||
|id=chr12:57638896..57638928,- | |||
|ontology_enrichment_celltype=CL:0002553!2.09e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.23e-66;1!CL:0000082;4.91e-15;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.23e-66,1;CL:0000082,4.91e-15,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.96e-10;29!UBERON:0001041;5.96e-10;30 | |||
|ontology_enrichment_disease=DOID:8552!5.69e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.04e-18;15!DOID:5409;8.69e-18;4!DOID:0050615;1.27e-17;16!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:3905;1.12e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.04e-18,15;DOID:5409,8.69e-18,4;DOID:0050615,1.27e-17,16;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7;DOID:3905,1.12e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.02e-15!94;UBERON:0001016!9.02e-15!94;UBERON:0005743!9.77e-13!86;UBERON:0001017!9.33e-12!82;UBERON:0000955!1.38e-10!69;UBERON:0006238!1.38e-10!69;UBERON:0001049!2.09e-09!57;UBERON:0005068!2.09e-09!57;UBERON:0006241!2.09e-09!57;UBERON:0007135!2.09e-09!57;UBERON:0001896!2.91e-08!3;UBERON:0005290!2.91e-08!3;UBERON:0010096!2.91e-08!3;UBERON:0002619!4.24e-08!22;UBERON:0003075!4.39e-08!86;UBERON:0007284!4.39e-08!86;UBERON:0004121!1.17e-07!169;UBERON:0002346!1.28e-07!90;UBERON:0000924!2.13e-07!173;UBERON:0006601!2.13e-07!173;UBERON:0002616!2.23e-07!59;UBERON:0000956!4.23e-07!25;UBERON:0000203!4.23e-07!25;UBERON:0002581!7.15e-07!1;UBERON:0002298!9.84e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;4.91e-15;19!UBERON:0000115;4.91e-15;19!UBERON:0002048;3.77e-13;22!UBERON:0004807;3.77e-13;22!UBERON:0000117;3.77e-13;22!UBERON:0000171;3.77e-13;22!UBERON:0000170;3.77e-13;22!UBERON:0005181;2.68e-09;35!UBERON:0000072;2.68e-09;37!UBERON:0005911;1.21e-08;36!UBERON:0005178;5.41e-08;34!UBERON:0002224;5.41e-08;34!UBERON:0000065;4.32e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,4.91e-15,19;UBERON:0000115,4.91e-15,19;UBERON:0002048,3.77e-13,22;UBERON:0000117,3.77e-13,22;UBERON:0000171,3.77e-13,22;UBERON:0000170,3.77e-13,22;UBERON:0005597,3.77e-13,22;UBERON:0000118,3.77e-13,22;UBERON:0004807,1.40e-10,28;UBERON:0005178,6.54e-09,34;UBERON:0002224,6.54e-09,34;UBERON:0005181,1.09e-08,35;UBERON:0005153,2.82e-08,37;UBERON:0008947,4.36e-08,38;UBERON:0003258,4.36e-08,38;UBERON:0000072,9.72e-07,47;UBERON:0005157,9.72e-07,47 | |||
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|short_description=p@chr12:57638896..57638928,- | |||
}} | }} |
Latest revision as of 10:42, 24 July 2015
Short description: | p@chr12:57638896..57638928, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57638896..57638928, - |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.23e-66 | 1 |
epithelial cell of lung | 4.91e-15 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 4.91e-15 | 19 |
lung epithelium | 4.91e-15 | 19 |
lung | 3.77e-13 | 22 |
respiratory tube | 3.77e-13 | 22 |
respiration organ | 3.77e-13 | 22 |
pair of lungs | 3.77e-13 | 22 |
lung primordium | 3.77e-13 | 22 |
lung bud | 3.77e-13 | 22 |
respiratory system epithelium | 1.40e-10 | 28 |
thoracic cavity element | 6.54e-09 | 34 |
thoracic cavity | 6.54e-09 | 34 |
thoracic segment organ | 1.09e-08 | 35 |
epithelial bud | 2.82e-08 | 37 |
respiratory primordium | 4.36e-08 | 38 |
endoderm of foregut | 4.36e-08 | 38 |
segment of respiratory tract | 9.72e-07 | 47 |
epithelial fold | 9.72e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.04e-18 | 15 |
lung small cell carcinoma | 8.69e-18 | 4 |
respiratory system cancer | 1.27e-17 | 16 |
bronchus cancer | 8.99e-11 | 7 |
bronchogenic carcinoma | 8.99e-11 | 7 |
lung carcinoma | 1.12e-08 | 9 |