FFCP PHASE1:Hg19::chr12:52448515..52448538,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:52448515..52448538,+ to FFCP PHASE1:Hg19::chr12:52448515..52448538,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3164 | |EntrezGene=3164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7980 | |HGNC=7980 | ||
|TSSclassifier=strong | |||
|UniProt=Q53Y00,Q6IBU8 | |UniProt=Q53Y00,Q6IBU8 | ||
|association_with_transcript=402bp_to_AB307717,AB464647,AB590255,BT007144,CR456704,CU677577,DQ891134,DQ894313,HQ692855_5end | |||
|cluster_id=chr12:52448515..52448538,+ | |||
|coexpression_cluster_id=C1018 | |||
|description=CAGE_peak_9_at_NR4A1_5end | |||
|id=chr12:52448515..52448538,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.83e-11!42;CL:0000860!5.18e-11!45;CL:0000557!6.19e-09!71;CL:0000839!1.03e-07!70;CL:0000766!2.44e-07!76;CL:0002009!6.60e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000097;9.68e-12;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.48e-12,5;CL:0002028,9.48e-12,5 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.20e-08;4!UBERON:0007284;2.20e-08;4!UBERON:0007297;1.48e-07;2!UBERON:0006965;4.23e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.06e-08!102;UBERON:0003061!5.06e-08!102;UBERON:0002371!7.39e-08!80;UBERON:0001474!1.05e-07!86;UBERON:0004765!1.12e-07!101;UBERON:0001434!1.12e-07!101;UBERON:0007023!1.74e-07!115;UBERON:0000926!9.87e-07!448;UBERON:0004120!9.87e-07!448;UBERON:0006603!9.87e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;7.12e-08;2!UBERON:0005090;1.48e-07;2!UBERON:0001630;1.48e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.85e-11,114;UBERON:0002133,5.73e-08,2;UBERON:0005090,1.56e-07,2;UBERON:0001630,1.56e-07,2 | |||
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| ||
|short_description=p9@NR4A1 | |||
}} | }} |
Latest revision as of 21:19, 18 September 2015
Short description: | p9@NR4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NR4A1_5end |
Coexpression cluster: | C1018_immature_CD14_Mast_cervical_seminal_heart_ovary |
Association with transcript: | 402bp_to_AB307717, AB464647, AB590255, BT007144, CR456704, CU677577, DQ891134, DQ894313, HQ692855_5end |
EntrezGene: | NR4A1 |
HGNC: | 7980 |
UniProt: | Q53Y00Q6IBU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.48e-12 | 5 |
basophil mast progenitor cell | 9.48e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.85e-11 | 114 |
atrioventricular valve | 5.73e-08 | 2 |
muscle structure | 1.56e-07 | 2 |
muscle organ | 1.56e-07 | 2 |