FFCP PHASE1:Hg19::chr12:32638939..32638950,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:32638939..32638950,+ to FFCP PHASE1:Hg19::chr12:32638939..32638950,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121512 | |EntrezGene=121512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19125 | |HGNC=19125 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z493 | |UniProt=B7Z493 | ||
|association_with_transcript=33bp_to_ENST00000531134,uc001rlc.2_5end | |||
|cluster_id=chr12:32638939..32638950,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_8_at_FGD4_5end | |||
|id=chr12:32638939..32638950,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.46e-53!76;CL:0002057!2.95e-52!42;CL:0002194!2.40e-48!63;CL:0000576!2.40e-48!63;CL:0000040!2.40e-48!63;CL:0000559!2.40e-48!63;CL:0002009!6.20e-48!65;CL:0000860!1.30e-47!45;CL:0000557!3.40e-42!71;CL:0000839!1.53e-41!70;CL:0000763!5.10e-31!112;CL:0000049!5.10e-31!112;CL:0000738!3.04e-29!140;CL:0002087!2.68e-25!119;CL:0002031!4.22e-21!124;CL:0000037!3.56e-20!172;CL:0000566!3.56e-20!172;CL:0002032!1.68e-18!165;CL:0000837!1.68e-18!165;CL:0000988!8.07e-18!182;CL:0002393!3.19e-12!9;CL:0002397!3.19e-12!9;CL:0000094!2.49e-11!8;CL:0000081!1.26e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-65;33!CL:0002057;1.11e-65;33!CL:0000473;1.23e-58;39!CL:0000234;1.23e-58;39!CL:0000576;1.91e-48;48!CL:0000766;2.81e-39;69!CL:0000094;7.91e-19;8!CL:0000763;1.68e-16;100!CL:0002393;6.43e-14;6!CL:0002397;6.43e-14;6!CL:0000081;3.08e-13;11!CL:0000738;7.52e-12;136!CL:0002087;2.83e-11;104!CL:0000775;6.75e-09;3!CL:0000875;3.08e-08;3!CL:0002396;3.08e-08;3!CL:0000988;6.46e-07;177!CL:0000767;6.48e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.08e-95,48;CL:0000234,2.08e-95,48;CL:0000766,5.33e-94,72;CL:0000860,3.82e-92,42;CL:0002057,3.82e-92,42;CL:0002194,5.59e-84,59;CL:0000576,5.59e-84,59;CL:0000040,5.59e-84,59;CL:0000559,5.59e-84,59;CL:0002009,8.51e-81,61;CL:0000839,1.13e-73,66;CL:0000557,2.25e-72,67;CL:0000763,1.47e-57,108;CL:0000049,1.47e-57,108;CL:0000738,5.74e-48,136;CL:0002087,6.56e-42,115;CL:0002031,5.66e-36,120;CL:0000037,9.65e-36,168;CL:0002032,7.16e-35,161;CL:0000837,7.16e-35,161;CL:0000988,4.21e-33,177;CL:0002393,1.66e-20,9;CL:0002397,1.66e-20,9;CL:0000094,6.44e-19,8;CL:0000081,2.66e-13,11;CL:0000134,2.15e-09,354;CL:0002320,6.26e-09,361;CL:0000775,6.76e-09,3;CL:0000875,2.94e-08,3;CL:0002396,2.94e-08,3;CL:0000219,2.55e-07,386;CL:0000767,5.34e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-65;42!CL:0000049;5.69e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.80e-48!115;UBERON:0002390!3.01e-45!102;UBERON:0003061!3.01e-45!102;UBERON:0002193!1.20e-41!112;UBERON:0002371!3.15e-35!80;UBERON:0001474!1.48e-32!86;UBERON:0002405!6.27e-29!115;UBERON:0004765!7.77e-26!101;UBERON:0001434!7.77e-26!101;UBERON:0001049!1.59e-24!57;UBERON:0005068!1.59e-24!57;UBERON:0006241!1.59e-24!57;UBERON:0007135!1.59e-24!57;UBERON:0003080!5.45e-21!42;UBERON:0002780!3.23e-20!41;UBERON:0001890!3.23e-20!41;UBERON:0006240!3.23e-20!41;UBERON:0002616!3.62e-20!59;UBERON:0002020!1.71e-16!34;UBERON:0003528!1.71e-16!34;UBERON:0001893!3.47e-16!34;UBERON:0000955!4.55e-16!69;UBERON:0006238!4.55e-16!69;UBERON:0001017!1.33e-15!82;UBERON:0002791!1.44e-15!33;UBERON:0003075!2.04e-15!86;UBERON:0007284!2.04e-15!86;UBERON:0005743!4.05e-15!86;UBERON:0001869!1.37e-14!32;UBERON:0002346!3.87e-14!90;UBERON:0003081!2.06e-13!216;UBERON:0000073!1.80e-12!94;UBERON:0001016!1.80e-12!94;UBERON:0003056!2.79e-12!61;UBERON:0000062!5.85e-11!511;UBERON:0002204!2.60e-10!167;UBERON:0002619!3.88e-10!22;UBERON:0002308!1.60e-09!9;UBERON:0000125!1.60e-09!9;UBERON:0000956!1.86e-09!25;UBERON:0000203!1.86e-09!25;UBERON:0000178!2.11e-09!15;UBERON:0000179!2.11e-09!15;UBERON:0000463!2.11e-09!15;UBERON:0002298!1.03e-08!8;UBERON:0001950!1.20e-08!20;UBERON:0000467!6.33e-08!625;UBERON:0000480!7.50e-08!626;UBERON:0000923!8.73e-08!604;UBERON:0005291!8.73e-08!604;UBERON:0006598!8.73e-08!604;UBERON:0002532!8.73e-08!604;UBERON:0002050!1.03e-07!605;UBERON:0005423!1.03e-07!605;UBERON:0009663!1.22e-07!7;UBERON:0000479!2.93e-07!787;UBERON:0000922!3.29e-07!612;UBERON:0002420!3.75e-07!9;UBERON:0007245!3.75e-07!9;UBERON:0010009!3.75e-07!9;UBERON:0010011!3.75e-07!9;UBERON:0000454!3.75e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;6.21e-08;9!UBERON:0002308;6.21e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.45e-66,98;UBERON:0003061,9.45e-66,98;UBERON:0002371,3.28e-62,76;UBERON:0002193,1.74e-60,108;UBERON:0001474,1.16e-56,82;UBERON:0002405,3.56e-55,93;UBERON:0004765,2.07e-50,90;UBERON:0001434,5.38e-44,100;UBERON:0003081,1.13e-23,203;UBERON:0002204,6.83e-21,167;UBERON:0000926,1.21e-10,315;UBERON:0004120,1.21e-10,315;UBERON:0006603,1.21e-10,315;UBERON:0002384,7.81e-09,371;UBERON:0000125,7.27e-08,9;UBERON:0002308,7.27e-08,9 | |||
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| ||
|short_description=p8@FGD4 | |||
}} | }} |
Latest revision as of 05:04, 18 September 2015
Short description: | p8@FGD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FGD4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 33bp_to_ENST00000531134, uc001rlc.2_5end |
EntrezGene: | FGD4 |
HGNC: | 19125 |
UniProt: | B7Z493 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.45e-66 | 98 |
blood island | 9.45e-66 | 98 |
bone marrow | 3.28e-62 | 76 |
hemolymphoid system | 1.74e-60 | 108 |
bone element | 1.16e-56 | 82 |
immune system | 3.56e-55 | 93 |
skeletal element | 2.07e-50 | 90 |
skeletal system | 5.38e-44 | 100 |
lateral plate mesoderm | 1.13e-23 | 203 |
musculoskeletal system | 6.83e-21 | 167 |
mesoderm | 1.21e-10 | 315 |
mesoderm-derived structure | 1.21e-10 | 315 |
presumptive mesoderm | 1.21e-10 | 315 |
connective tissue | 7.81e-09 | 371 |
neural nucleus | 7.27e-08 | 9 |
nucleus of brain | 7.27e-08 | 9 |