FFCP PHASE1:Hg19::chr12:2903775..2903794,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42876 | |HGNC=42876 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-314bp_to_ENST00000540428_5end | |||
|cluster_id=chr12:2903775..2903794,- | |||
|coexpression_cluster_id=C411 | |||
|description=CAGE_peak_2_at_CBX3P4_5end | |||
|id=chr12:2903775..2903794,- | |||
|ontology_enrichment_celltype=CL:0002057!4.69e-08!42;CL:0000860!3.28e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.34e-18;5!CL:0000860;1.82e-17;33!CL:0002057;1.82e-17;33!CL:0000473;6.54e-14;39!CL:0000234;6.54e-14;39!CL:0000163;1.90e-10;9!CL:0000766;5.94e-09;69!CL:0000576;1.14e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.34e-18,5;CL:0002028,2.34e-18,5;CL:0000839,1.35e-15,66;CL:0000557,2.42e-15,67;CL:0000766,3.54e-14,72;CL:0000860,1.77e-13,42;CL:0002057,1.77e-13,42;CL:0000473,1.13e-11,48;CL:0000234,1.13e-11,48;CL:0000163,1.90e-10,9;CL:0002194,3.82e-09,59;CL:0000576,3.82e-09,59;CL:0000040,3.82e-09,59;CL:0000559,3.82e-09,59;CL:0000763,6.20e-09,108;CL:0000049,6.20e-09,108;CL:0002009,8.11e-09,61;CL:0002031,7.05e-08,120;CL:0000738,9.28e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;5.82e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.95e-29!115;UBERON:0001049!1.86e-20!57;UBERON:0005068!1.86e-20!57;UBERON:0006241!1.86e-20!57;UBERON:0007135!1.86e-20!57;UBERON:0002616!7.24e-18!59;UBERON:0001017!4.16e-16!82;UBERON:0003080!4.75e-15!42;UBERON:0000955!6.64e-15!69;UBERON:0006238!6.64e-15!69;UBERON:0005743!7.05e-15!86;UBERON:0003075!1.99e-14!86;UBERON:0007284!1.99e-14!86;UBERON:0002346!2.42e-14!90;UBERON:0002780!5.63e-14!41;UBERON:0001890!5.63e-14!41;UBERON:0006240!5.63e-14!41;UBERON:0000073!1.64e-12!94;UBERON:0001016!1.64e-12!94;UBERON:0001893!1.30e-11!34;UBERON:0002791!7.03e-11!33;UBERON:0002020!1.76e-10!34;UBERON:0003528!1.76e-10!34;UBERON:0001869!9.11e-10!32;UBERON:0002619!4.08e-09!22;UBERON:0002298!4.30e-09!8;UBERON:0001950!1.03e-08!20;UBERON:0003056!2.18e-08!61;UBERON:0000956!1.10e-07!25;UBERON:0000203!1.10e-07!25;UBERON:0000062!2.43e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;2.53e-11;1!UBERON:0002134;4.35e-11;1!UBERON:0005208;4.35e-11;1!UBERON:0004145;4.35e-11;1!UBERON:0005946;4.35e-11;1!UBERON:0005965;4.35e-11;1!UBERON:0002078;4.35e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.36e-13,76;UBERON:0002405,1.03e-12,93;UBERON:0001474,2.89e-12,82;UBERON:0002390,5.61e-12,98;UBERON:0003061,5.61e-12,98;UBERON:0000996,2.53e-11,1;UBERON:0002134,3.76e-11,1;UBERON:0005208,3.76e-11,1;UBERON:0005946,3.76e-11,1;UBERON:0005965,3.76e-11,1;UBERON:0002078,3.76e-11,1;UBERON:0004765,4.88e-11,90;UBERON:0002193,1.05e-10,108;UBERON:0001434,8.90e-10,100;UBERON:0003081,6.71e-07,203 | |||
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| ||
|short_description=p2@CBX3P4 | |||
}} | }} |
Latest revision as of 01:22, 18 September 2015
Short description: | p2@CBX3P4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CBX3P4_5end |
Coexpression cluster: | C411_vagina_Mast_breast_heart_CD14_aorta_liver |
Association with transcript: | -314bp_to_ENST00000540428_5end |
EntrezGene: | NA |
HGNC: | 42876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.34e-18 | 5 |
basophil mast progenitor cell | 2.34e-18 | 5 |
myeloid lineage restricted progenitor cell | 1.35e-15 | 66 |
granulocyte monocyte progenitor cell | 2.42e-15 | 67 |
myeloid leukocyte | 3.54e-14 | 72 |
classical monocyte | 1.77e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.77e-13 | 42 |
defensive cell | 1.13e-11 | 48 |
phagocyte | 1.13e-11 | 48 |
endocrine cell | 1.90e-10 | 9 |
monopoietic cell | 3.82e-09 | 59 |
monocyte | 3.82e-09 | 59 |
monoblast | 3.82e-09 | 59 |
promonocyte | 3.82e-09 | 59 |
myeloid cell | 6.20e-09 | 108 |
common myeloid progenitor | 6.20e-09 | 108 |
macrophage dendritic cell progenitor | 8.11e-09 | 61 |
hematopoietic lineage restricted progenitor cell | 7.05e-08 | 120 |
leukocyte | 9.28e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.36e-13 | 76 |
immune system | 1.03e-12 | 93 |
bone element | 2.89e-12 | 82 |
hematopoietic system | 5.61e-12 | 98 |
blood island | 5.61e-12 | 98 |
vagina | 2.53e-11 | 1 |
tricuspid valve | 3.76e-11 | 1 |
right atrium valve | 3.76e-11 | 1 |
outflow tract of atrium | 3.76e-11 | 1 |
outflow part of right atrium | 3.76e-11 | 1 |
right cardiac atrium | 3.76e-11 | 1 |
skeletal element | 4.88e-11 | 90 |
hemolymphoid system | 1.05e-10 | 108 |
skeletal system | 8.90e-10 | 100 |
lateral plate mesoderm | 6.71e-07 | 203 |