FFCP PHASE1:Hg19::chr12:19592493..19592524,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:19592493..19592524,+ to FFCP PHASE1:Hg19::chr12:19592493..19592524,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121536 | |EntrezGene=121536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24051 | |HGNC=24051 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZN18 | |UniProt=Q6ZN18 | ||
|association_with_transcript=-83bp_to_ENST00000398864,NM_001114176,NM_153207,uc001ree.2,uc001ref.2_5end | |||
|cluster_id=chr12:19592493..19592524,+ | |||
|description=CAGE_peak_3_at_AEBP2_5end | |||
|id=chr12:19592493..19592524,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.83e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.50e-38!115;UBERON:0001049!1.54e-16!57;UBERON:0005068!1.54e-16!57;UBERON:0006241!1.54e-16!57;UBERON:0007135!1.54e-16!57;UBERON:0002616!4.09e-14!59;UBERON:0002780!2.98e-13!41;UBERON:0001890!2.98e-13!41;UBERON:0006240!2.98e-13!41;UBERON:0003080!6.72e-13!42;UBERON:0002020!5.34e-12!34;UBERON:0003528!5.34e-12!34;UBERON:0001893!7.57e-12!34;UBERON:0001869!1.52e-11!32;UBERON:0000955!1.54e-11!69;UBERON:0006238!1.54e-11!69;UBERON:0002791!2.73e-11!33;UBERON:0002346!3.91e-11!90;UBERON:0003075!2.10e-10!86;UBERON:0007284!2.10e-10!86;UBERON:0001017!9.54e-10!82;UBERON:0002619!1.33e-09!22;UBERON:0000073!2.02e-09!94;UBERON:0001016!2.02e-09!94;UBERON:0005743!1.03e-08!86;UBERON:0001950!1.97e-08!20;UBERON:0000956!8.37e-08!25;UBERON:0000203!8.37e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.00e-11;32!UBERON:0001893;2.49e-11;34!UBERON:0003528;3.54e-11;34!UBERON:0002020;3.54e-11;34!UBERON:0002791;4.54e-11;32!UBERON:0007023;5.92e-11;114!UBERON:0002780;1.17e-10;41!UBERON:0001890;1.17e-10;41!UBERON:0002619;2.86e-10;22!UBERON:0000073;1.95e-09;53!UBERON:0002616;1.95e-09;53!UBERON:0001950;5.14e-09;20!UBERON:0000956;1.80e-08;25!UBERON:0000203;1.80e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.80e-38,114;UBERON:0001049,3.87e-17,56;UBERON:0005068,3.87e-17,56;UBERON:0006241,3.87e-17,56;UBERON:0007135,3.87e-17,56;UBERON:0000073,2.08e-16,53;UBERON:0002616,2.08e-16,53;UBERON:0002780,2.49e-13,41;UBERON:0001890,2.49e-13,41;UBERON:0003080,2.49e-13,41;UBERON:0006240,2.49e-13,41;UBERON:0003528,3.33e-12,34;UBERON:0002020,3.33e-12,34;UBERON:0001893,4.75e-12,34;UBERON:0000955,6.63e-12,68;UBERON:0006238,6.63e-12,68;UBERON:0001869,9.65e-12,32;UBERON:0002346,1.77e-11,86;UBERON:0002791,2.47e-11,32;UBERON:0001016,8.99e-11,89;UBERON:0003075,9.96e-11,82;UBERON:0007284,9.96e-11,82;UBERON:0001017,3.88e-10,81;UBERON:0002619,5.97e-10,22;UBERON:0010314,5.27e-09,132;UBERON:0001950,9.42e-09,20;UBERON:0011216,1.30e-08,223;UBERON:0000956,6.32e-08,25;UBERON:0000203,6.32e-08,25;UBERON:0010371,6.38e-08,104 | |||
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| ||
|short_description=p3@AEBP2 | |||
}} | }} |
Latest revision as of 18:04, 17 September 2015
Short description: | p3@AEBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AEBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -83bp_to_ENST00000398864, NM_001114176, NM_153207, uc001ree.2, uc001ref.2_5end |
EntrezGene: | AEBP2 |
HGNC: | 24051 |
UniProt: | Q6ZN18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.80e-38 | 114 |
neural tube | 3.87e-17 | 56 |
neural rod | 3.87e-17 | 56 |
future spinal cord | 3.87e-17 | 56 |
neural keel | 3.87e-17 | 56 |
regional part of nervous system | 2.08e-16 | 53 |
regional part of brain | 2.08e-16 | 53 |
regional part of forebrain | 2.49e-13 | 41 |
forebrain | 2.49e-13 | 41 |
anterior neural tube | 2.49e-13 | 41 |
future forebrain | 2.49e-13 | 41 |
brain grey matter | 3.33e-12 | 34 |
gray matter | 3.33e-12 | 34 |
telencephalon | 4.75e-12 | 34 |
brain | 6.63e-12 | 68 |
future brain | 6.63e-12 | 68 |
cerebral hemisphere | 9.65e-12 | 32 |
neurectoderm | 1.77e-11 | 86 |
regional part of telencephalon | 2.47e-11 | 32 |
nervous system | 8.99e-11 | 89 |
neural plate | 9.96e-11 | 82 |
presumptive neural plate | 9.96e-11 | 82 |
central nervous system | 3.88e-10 | 81 |
regional part of cerebral cortex | 5.97e-10 | 22 |
structure with developmental contribution from neural crest | 5.27e-09 | 132 |
neocortex | 9.42e-09 | 20 |
organ system subdivision | 1.30e-08 | 223 |
cerebral cortex | 6.32e-08 | 25 |
pallium | 6.32e-08 | 25 |
ecto-epithelium | 6.38e-08 | 104 |