FFCP PHASE1:Hg19::chr12:15114640..15114653,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:15114640..15114653,- to FFCP PHASE1:Hg19::chr12:15114640..15114653,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=397 | |EntrezGene=397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=679 | |HGNC=679 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2R5 | |UniProt=F5H2R5 | ||
|association_with_transcript=8bp_to_ENST00000542276_5end | |||
|cluster_id=chr12:15114640..15114653,- | |||
|description=CAGE_peak_7_at_ARHGDIB_5end | |||
|id=chr12:15114640..15114653,- | |||
|ontology_enrichment_celltype=CL:0000037!1.81e-33!172;CL:0000566!1.81e-33!172;CL:0002032!6.36e-33!165;CL:0000837!6.36e-33!165;CL:0000988!9.52e-32!182;CL:0002031!2.28e-27!124;CL:0000738!9.28e-27!140;CL:0002087!7.80e-25!119;CL:0000542!5.90e-17!53;CL:0000051!5.90e-17!53;CL:0000838!1.78e-16!52;CL:0000763!5.06e-16!112;CL:0000049!5.06e-16!112;CL:0000839!6.17e-11!70;CL:0000766!2.09e-10!76;CL:0000557!2.92e-10!71;CL:0000084!1.36e-09!25;CL:0000827!1.36e-09!25;CL:0002009!4.01e-09!65;CL:0002194!1.78e-08!63;CL:0000576!1.78e-08!63;CL:0000040!1.78e-08!63;CL:0000559!1.78e-08!63;CL:0000791!3.83e-08!18;CL:0000789!3.83e-08!18;CL:0002420!3.83e-08!18;CL:0002419!3.83e-08!18;CL:0000790!3.83e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.68e-11;25!CL:0000542;2.80e-10;53!CL:0002159;7.25e-09;14!CL:0000791;8.79e-09;18!CL:0000789;8.79e-09;18!CL:0002419;8.79e-09;18!CL:0000624;1.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,1.37e-30,161;CL:0000837,1.37e-30,161;CL:0000037,5.00e-30,168;CL:0000988,3.70e-27,177;CL:0002031,2.45e-24,120;CL:0002087,1.67e-22,115;CL:0000738,2.07e-22,136;CL:0000542,2.84e-20,53;CL:0000051,2.84e-20,53;CL:0000838,1.61e-19,52;CL:0000763,3.56e-12,108;CL:0000049,3.56e-12,108;CL:0000084,1.39e-11,25;CL:0000827,1.39e-11,25;CL:0000791,4.97e-09,18;CL:0000789,4.97e-09,18;CL:0002420,4.97e-09,18;CL:0002419,4.97e-09,18;CL:0000790,4.97e-09,18;CL:0002159,1.32e-08,14;CL:0000624,6.35e-08,6;CL:0000839,3.61e-07,66;CL:0000945,6.71e-07,24;CL:0000826,6.71e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;2.80e-10;53!CL:0000790;8.79e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!8.87e-10!51;DOID:0060083!8.87e-10!51;DOID:1240!2.85e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.11e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.05e-10,51;DOID:0060083,1.05e-10,51;DOID:1240,2.38e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.27e-14!102;UBERON:0003061!3.27e-14!102;UBERON:0002193!2.70e-13!112;UBERON:0003081!1.99e-10!216;UBERON:0002371!1.85e-08!80;UBERON:0002405!5.53e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.99e-08,98;UBERON:0003061,5.99e-08,98;UBERON:0002193,8.93e-08,108;UBERON:0002405,1.16e-07,93;UBERON:0005631,1.78e-07,14;UBERON:0000158,1.78e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,3.9319446983431,0.791300934685361,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,2.06316195519468,2.46301768349837,2.2826126580967,2.36018566109342,1.91914699048606,0.77408061658038,1.83884244895785,3.91567694411725,0.369754010166788,0.46480320348181,3.12772311472327,0.880801318004542,2.21598163412751,0.601633342410425,0.651032612147555,0.223915474239924,0,0.257575567634187,1.45398238779565,1.13362783106643,0.485168122375632,1.16214518452842,0.411167888021826,1.85823822537062,0.28769239232215,1.2808035326455,0,0.689491361473237,0.645484683583826,2.70852973188684,1.12945403725563,0.818718450173537,1.34834090667051,3.06083892370903,0.962787081228281,0.639337125799041,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0.622822248995575,1.50749199154046,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0.637812899895131,1.88692780957538,0.336985893439485,0.450530678524519,0,1.42506371870624,1.79025009479181,2.19196984517561,0,0.546138611262131,0,0,0.800791974072025,1.14950487990897,1.32208974556972,2.86216126360609,1.70763890732835,1.76171156811282,1.52909291250092,0,1.12101712596307,0.526768169550154,2.75393678159366,1.96505381374582,3.28962398399215,1.33749196312542,3.91106719960308,1.89379122293893,0,1.00269411196656,3.24066498222321,1.32920336750173,4.06205795647523,1.28091319725675,1.1705341280389,1.47994114143309,1.38175008892924,0.869409257205157,1.77943875794473,1.07016331235885,0,1.58633079776593,1.53288197440768,2.06176467289578,1.77113784413652,1.59282707162048,1.30216690771284,0.950452044448374,0.301150238155546,0.511946444617674,1.24930726552346,0.710331756132051,0,3.02410114837099,3.20928234940209,2.60683926989038,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.327447688744282,2.5500670180478,9.26961106961073,3.24547393654683,4.00498395788315,2.12732736830184,0,0,0.74291500265913,3.9752481473341,1.72046919021225,2.08284300964557,1.13061588384802,0.838998872419812,2.75118041940067,0.835979866147242,0.258416759169329,0,1.00416183829401,0,0.760272105718513,0,0.735326160691737,4.0507097394088,1.07159673940896,0.673588117878509,0.900891843866578,4.5994991239765,4.74632829784064,1.46561395144326,1.31780417436063,0,0.872188104285069,0,0,0,0,0,0,0,0,0.622422070799533,0.404132016209064,0.980771418680752,0,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02088964844019,0,0,0,0.600182192168805,0.618315175430633,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,5.60456474173561,5.18217629122586,6.02289650316908,0.121973706129595,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,1.44375896333917,0,0.168584690078102,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,1.86575485194663,1.1240175325762,3.01586917234893,0.0925884451585296,0.325808305310325,2.07986957055916,0,0,0.117408694235822,0.144366447761074,0,0,0,0,2.70838706696137,7.02012795417713,6.8370334652815,4.68669169933885,1.00789276919316,3.1190521393325,0.179117045405697,0,0.383382679165211,1.97065295158377,1.05658120815871,0.621984346622316,0.864719720501769,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,2.00902836572851,2.10833939483032,0,0,0,0,0,0,1.45710687191585,1.77327684181734,4.31255149719035,3.08023287071396,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.431428401637234,1.06727557803444,1.5156378572313,3.32870879020994,0.604780586659361,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,2.20557117333613,0,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,1.02056223165909,0.647747748306418,0,0,0,0,0,0.223874754722178,3.50815802633495,2.3529190592241,0,0,0,1.13345112812495,0,0,1.14853107599234,3.25030123018261,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.991709492165869,0.384380134730212,0.638063562472921,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0,0.55597265731176,0,0,0,0,0.255897791311334,0,0,0,0,0,0,1.01091240786658,0,0.842516912477962,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0.563391205064483,0.286822704408103,0.0982490410131212,0,0,0.211107635297664,0,0,0,1.53955380360819,0.670302275535787,2.17781969722645,0.941438007767792,0,0,0.443430153536676,0,1.52234282769651,0.764637207142375,0.569647187174163,0.952927101831156,0.822724546172388,0.648473311192717,1.08006287447623,1.58625035258854,0,0,9.06648799129817,1.67222857613147,0,1.70740424036194,1.75368900001705,2.3949524571938,2.10655907145603,1.48171507906718,10.3879020887858,0.842391534340376,0.912938716132769,16.2947091603944,0,6.09450400085772,2.24823305145179,3.63239472943886,1.70338495076131,1.03051603426729,0.921722292925374,1.3420566473545,0.667396566847634,6.64319524366937,1.9488432172667,0,1.35227839237992,0.99921590399346,0,0.561421621224659,1.02555725490326,0,0.111443384277478,0,2.14870036263921,1.48482340416319,1.22864280839693,0,0.140669416410513,0.111308705022906,0,0,0.9962399412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| ||
|short_description=p7@ARHGDIB | |||
}} | }} |
Latest revision as of 14:29, 17 September 2015
Short description: | p7@ARHGDIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARHGDIB_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000542276_5end |
EntrezGene: | ARHGDIB |
HGNC: | 679 |
UniProt: | F5H2R5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 1.37e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-30 | 161 |
hematopoietic stem cell | 5.00e-30 | 168 |
hematopoietic cell | 3.70e-27 | 177 |
hematopoietic lineage restricted progenitor cell | 2.45e-24 | 120 |
nongranular leukocyte | 1.67e-22 | 115 |
leukocyte | 2.07e-22 | 136 |
lymphocyte | 2.84e-20 | 53 |
common lymphoid progenitor | 2.84e-20 | 53 |
lymphoid lineage restricted progenitor cell | 1.61e-19 | 52 |
myeloid cell | 3.56e-12 | 108 |
common myeloid progenitor | 3.56e-12 | 108 |
T cell | 1.39e-11 | 25 |
pro-T cell | 1.39e-11 | 25 |
mature alpha-beta T cell | 4.97e-09 | 18 |
alpha-beta T cell | 4.97e-09 | 18 |
immature T cell | 4.97e-09 | 18 |
mature T cell | 4.97e-09 | 18 |
immature alpha-beta T cell | 4.97e-09 | 18 |
general ecto-epithelial cell | 1.32e-08 | 14 |
CD4-positive, alpha-beta T cell | 6.35e-08 | 6 |
myeloid lineage restricted progenitor cell | 3.61e-07 | 66 |
lymphocyte of B lineage | 6.71e-07 | 24 |
pro-B cell | 6.71e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.99e-08 | 98 |
blood island | 5.99e-08 | 98 |
hemolymphoid system | 8.93e-08 | 108 |
immune system | 1.16e-07 | 93 |
extraembryonic membrane | 1.78e-07 | 14 |
membranous layer | 1.78e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.05e-10 | 51 |
immune system cancer | 1.05e-10 | 51 |
leukemia | 2.38e-09 | 39 |