FFCP PHASE1:Hg19::chr12:14720542..14720554,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:14720542..14720554,- to FFCP PHASE1:Hg19::chr12:14720542..14720554,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79887 | |EntrezGene=79887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26215 | |HGNC=26215 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P4A8 | |UniProt=Q6P4A8 | ||
|association_with_transcript=0bp_to_AK026315,AK225458_5end | |||
|cluster_id=chr12:14720542..14720554,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_4_at_PLBD1_5end | |||
|id=chr12:14720542..14720554,- | |||
|ontology_enrichment_celltype=CL:0002057!2.44e-27!42;CL:0000860!1.11e-24!45;CL:0002009!1.55e-21!65;CL:0000766!1.85e-21!76;CL:0002194!1.14e-19!63;CL:0000576!1.14e-19!63;CL:0000040!1.14e-19!63;CL:0000559!1.14e-19!63;CL:0000557!1.43e-18!71;CL:0000839!1.94e-16!70;CL:0000763!1.27e-15!112;CL:0000049!1.27e-15!112;CL:0000738!1.75e-13!140;CL:0000039!1.40e-09!7;CL:0000586!1.40e-09!7;CL:0002087!1.72e-09!119;CL:0000037!5.65e-09!172;CL:0000566!5.65e-09!172;CL:0002032!1.68e-08!165;CL:0000837!1.68e-08!165;CL:0002031!1.02e-07!124;CL:0000988!1.16e-07!182;CL:0000453!7.58e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.20e-22;3!CL:0000039;5.29e-16;7!CL:0000586;5.29e-16;7!CL:0000860;6.43e-15;33!CL:0002057;6.43e-15;33!CL:0000094;7.33e-15;8!CL:0000473;8.67e-12;39!CL:0000234;8.67e-12;39!CL:0000081;7.64e-11;11!CL:0000766;4.66e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.20e-22,3;CL:0000039,5.97e-16,7;CL:0000586,5.97e-16,7;CL:0000766,6.36e-16,72;CL:0000094,7.23e-15,8;CL:0000763,4.35e-13,108;CL:0000049,4.35e-13,108;CL:0000473,1.67e-12,48;CL:0000234,1.67e-12,48;CL:0000860,1.13e-11,42;CL:0002057,1.13e-11,42;CL:0002009,2.43e-11,61;CL:0000738,2.98e-11,136;CL:0000081,7.56e-11,11;CL:0000557,3.58e-10,67;CL:0002194,1.13e-09,59;CL:0000576,1.13e-09,59;CL:0000040,1.13e-09,59;CL:0000559,1.13e-09,59;CL:0002032,5.24e-09,161;CL:0000837,5.24e-09,161;CL:0000037,1.69e-08,168;CL:0000839,1.71e-08,66;CL:0000988,6.66e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-07;42!UBERON:0009117;8.97e-07;10!UBERON:0005564;8.97e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;1.57e-08;1!DOID:10165;1.57e-08;1!DOID:1798;1.57e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.75e-08,1;DOID:10165,1.75e-08,1;DOID:1798,1.75e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.19e-16!102;UBERON:0003061!2.19e-16!102;UBERON:0002371!5.25e-15!80;UBERON:0002193!1.97e-14!112;UBERON:0001474!6.94e-14!86;UBERON:0004765!3.14e-11!101;UBERON:0001434!3.14e-11!101;UBERON:0002405!1.38e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.34e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.60e-09,98;UBERON:0003061,3.60e-09,98;UBERON:0002371,9.21e-09,76;UBERON:0000473,2.90e-08,8;UBERON:0002193,4.12e-08,108;UBERON:0001474,5.41e-08,82;UBERON:0004765,3.98e-07,90;UBERON:0002405,7.70e-07,93 | |||
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| ||
|short_description=p4@PLBD1 | |||
}} | }} |
Latest revision as of 13:23, 17 September 2015
Short description: | p4@PLBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLBD1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 0bp_to_AK026315, AK225458_5end |
EntrezGene: | PLBD1 |
HGNC: | 26215 |
UniProt: | Q6P4A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.20e-22 | 3 |
germ line cell | 5.97e-16 | 7 |
germ cell | 5.97e-16 | 7 |
myeloid leukocyte | 6.36e-16 | 72 |
granulocyte | 7.23e-15 | 8 |
myeloid cell | 4.35e-13 | 108 |
common myeloid progenitor | 4.35e-13 | 108 |
defensive cell | 1.67e-12 | 48 |
phagocyte | 1.67e-12 | 48 |
classical monocyte | 1.13e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-11 | 42 |
macrophage dendritic cell progenitor | 2.43e-11 | 61 |
leukocyte | 2.98e-11 | 136 |
blood cell | 7.56e-11 | 11 |
granulocyte monocyte progenitor cell | 3.58e-10 | 67 |
monopoietic cell | 1.13e-09 | 59 |
monocyte | 1.13e-09 | 59 |
monoblast | 1.13e-09 | 59 |
promonocyte | 1.13e-09 | 59 |
hematopoietic oligopotent progenitor cell | 5.24e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.24e-09 | 161 |
hematopoietic stem cell | 1.69e-08 | 168 |
myeloid lineage restricted progenitor cell | 1.71e-08 | 66 |
hematopoietic cell | 6.66e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.60e-09 | 98 |
blood island | 3.60e-09 | 98 |
bone marrow | 9.21e-09 | 76 |
testis | 2.90e-08 | 8 |
hemolymphoid system | 4.12e-08 | 108 |
bone element | 5.41e-08 | 82 |
skeletal element | 3.98e-07 | 90 |
immune system | 7.70e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.75e-08 | 1 |
endocrine pancreas cancer | 1.75e-08 | 1 |
pancreatic endocrine carcinoma | 1.75e-08 | 1 |