FFCP PHASE1:Hg19::chr12:12878903..12878925,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:12878903..12878925,+ to FFCP PHASE1:Hg19::chr12:12878903..12878925,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81575 | |EntrezGene=81575 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25268 | |HGNC=25268 | ||
|TSSclassifier=strong | |||
|UniProt=Q96LR9 | |UniProt=Q96LR9 | ||
|association_with_transcript=38bp_to_ENST00000326765_5end | |||
|cluster_id=chr12:12878903..12878925,+ | |||
|description=CAGE_peak_4_at_APOLD1_5end | |||
|id=chr12:12878903..12878925,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.14e-12!182;CL:0000037!2.20e-11!172;CL:0000566!2.20e-11!172;CL:0002032!4.48e-10!165;CL:0000837!4.48e-10!165;CL:0000219!1.59e-08!390;CL:0000542!2.99e-08!53;CL:0000051!2.99e-08!53;CL:0000838!6.89e-08!52;CL:0000738!5.40e-07!140;CL:0000134!9.59e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000624;4.75e-10;6!CL:0000542;7.10e-10;53!CL:0000084;1.02e-09;25!CL:0000791;1.47e-07;18!CL:0000789;1.47e-07;18!CL:0002419;1.47e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.82e-15,53;CL:0000051,9.82e-15,53;CL:0000838,6.17e-14,52;CL:0000988,6.46e-13,177;CL:0000037,3.68e-12,168;CL:0002032,1.89e-10,161;CL:0000837,1.89e-10,161;CL:0000624,2.66e-10,6;CL:0000738,7.36e-10,136;CL:0000084,1.53e-09,25;CL:0000827,1.53e-09,25;CL:0002087,5.99e-09,115;CL:0002031,3.49e-08,120;CL:0000791,1.61e-07,18;CL:0000789,1.61e-07,18;CL:0002420,1.61e-07,18;CL:0002419,1.61e-07,18;CL:0000790,1.61e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;7.10e-10;53!CL:0000790;1.47e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!9.26e-09!51;DOID:0060083!9.26e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.77e-07,371;UBERON:0002370,8.74e-07,4;UBERON:0005058,8.74e-07,4;UBERON:0009113,8.74e-07,4;UBERON:0003295,8.74e-07,4;UBERON:0005562,8.74e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0.37129905888014,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.61560529038394,0.816002764977012,0,0.286235987131057,0.273748850145768,0.627713197974014,1.60468152070698,1.06730766284929,1.49550484495991,1.96682138424452,0,1.08371286321253,0,0,0,2.09161441566814,1.56386155736164,1.46800219667424,0.553995408531877,0.601633342410425,1.95309783644267,0.223915474239924,0,0,0,0,0.242584061187816,0,0,0,1.1507695692886,1.0246428261164,1.6553756092201,0.344745680736619,0,0,0,0,0.224723484445085,0,0,1.27867425159808,0.659702600373432,0.398927315243264,0.852449501065388,0.580418477257168,0,0,1.25624332628372,1.5644487552606,0.868755378820466,0.605399502633369,0.368277635987565,0,0.422510572623884,1.70083439972035,0.419317291016752,0.673971786878971,0.450530678524519,0.48217676009124,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,1.14950487990897,0,0,0,2.34894875748376,0.764546456250458,1.32171328579026,0.560508562981536,1.31692042387539,3.34406609193516,2.75107533924415,2.46721798799411,4.51403537554831,1.30368906653436,0.946895611469467,1.94826728407911,6.79603786999559,7.36514768687093,2.87994062958707,4.60366568400527,2.94610035369053,4.94225520727537,3.94650971048823,3.31620021343018,11.8819265151372,0.444859689486181,1.07016331235885,3.1360657141493,7.47841661803937,1.91610246800961,2.40539211837841,1.01207876807801,0.318565414324097,0.651083453856419,0,0.451725357233318,0.511946444617674,0,0.473554504088034,0,2.01606743224732,1.06976078313403,2.17236605824198,0,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0.795285947051099,0,0.661743720148475,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0.446498641420399,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0,0.860509862246441,0,1.68203280042692,0,0.49333509683432,0.622422070799533,0.134710672069688,0,0,0,0.234321431833797,0,1.1409436430889,0.149448680551801,0.704606991862589,0,0.280901613404497,0.408308342509787,0.368502951935304,0.309977343527296,0,0.989067717114227,0.910161361938026,1.43723628363248,1.17835279767846,0.375355559615893,0.277064115484183,2.19488810440419,0.919463387397059,0.751190294532984,0.340296549480063,0.89694817844431,0.213557388818567,0.211931901159562,2.40072876867522,0.309157587715317,0.257640540045629,0.37223371266318,0.506328996723799,0.194874010322397,1.00973509697646,0.368199594569197,0,1.06502877754984,0.806016785821122,0.508681776931463,0,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,1.38134921352481,0,0,0.591534000199219,0.505754070234305,0,0.220587945464788,0.871517776369625,0.474541238222193,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0.8231480226628,0,0,0,0.590789906681404,1.32438929824395,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0.288732895522148,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.179117045405697,0.290633938513962,0,0.492663237895943,1.67292024625129,0.621984346622316,0.720599767084807,0.25248486685276,0.253991577168676,3.81988425558278,0,0,0.102827492703324,0.300343057843917,0.571652865261156,0.672786506072164,0.43596006883328,0.22001485746285,0,0,0,0.26593811658487,0,0.771622122786426,0,0.799266537048298,0.714889968290738,0,1.64648067356154,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.958499421966331,1.14861935834114,1.42636905040718,0.144781306667579,0,0.895304816199478,3.6988097517864,3.34952292343276,3.88129634747131,4.10697716095195,0,1.30139853857622,0,0,0.637938751653163,0.749007023947182,0,2.07207756718018,0,0,0,0,0.356857977594324,0.788512075169673,0.702848489956279,0,0,0,1.32845119707087,0.184369168541703,1.12948698808508,0.391602314925481,0,1.44737618286021,2.5885704098234,0.853820462427555,0,0,0,0,0.460385919864187,0,0,0,0.160853921143607,0,0.616838775210622,0.177561725313127,1.06765302817952,1.03850885836724,1.04589340613963,0,0,0,0.574072240823034,1.45672934405374,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0.254876273045038,0,0,1.31555925987561,1.8300481571743,0.769350375349168,0,0,0.309123034943167,1.83138929636687,2.22775649785588,0,0,0,0.096670718292122,0.308097234229289,0.460511024178389,0.827019434907183,0.429680979473094,0.435050081742686,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0,0.929691098594572,0.62962469366128,0,0,0,0.869932992075073,0,0,0,0.316379424718726,0,0.511795582622668,0,0,0.78494864019923,0.179872457583315,0,0,0,1.58510321173008,0.421258456238981,0,0.243713489631284,0,1.09199929126389,0.141405431953713,0,1.10273068709225,0,0,0.578775534266688,0,0.405820753925408,0.30982349809975,0.281695602532241,0.717056761020258,0,0,0.709522128141196,0.211107635297664,0,0.379473173765715,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0.507447609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| ||
|short_description=p4@APOLD1 | |||
}} | }} |
Latest revision as of 07:27, 17 September 2015
Short description: | p4@APOLD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APOLD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENST00000326765_5end |
EntrezGene: | APOLD1 |
HGNC: | 25268 |
UniProt: | Q96LR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.82e-15 | 53 |
common lymphoid progenitor | 9.82e-15 | 53 |
lymphoid lineage restricted progenitor cell | 6.17e-14 | 52 |
hematopoietic cell | 6.46e-13 | 177 |
hematopoietic stem cell | 3.68e-12 | 168 |
hematopoietic oligopotent progenitor cell | 1.89e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.89e-10 | 161 |
CD4-positive, alpha-beta T cell | 2.66e-10 | 6 |
leukocyte | 7.36e-10 | 136 |
T cell | 1.53e-09 | 25 |
pro-T cell | 1.53e-09 | 25 |
nongranular leukocyte | 5.99e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 3.49e-08 | 120 |
mature alpha-beta T cell | 1.61e-07 | 18 |
alpha-beta T cell | 1.61e-07 | 18 |
immature T cell | 1.61e-07 | 18 |
mature T cell | 1.61e-07 | 18 |
immature alpha-beta T cell | 1.61e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.77e-07 | 371 |
thymus | 8.74e-07 | 4 |
hemolymphoid system gland | 8.74e-07 | 4 |
thymic region | 8.74e-07 | 4 |
pharyngeal gland | 8.74e-07 | 4 |
thymus primordium | 8.74e-07 | 4 |