FFCP PHASE1:Hg19::chr12:125398498..125398506,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:125398498..125398506,- to FFCP PHASE1:Hg19::chr12:125398498..125398506,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7316 | |EntrezGene=7316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12468 | |HGNC=12468 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-178bp_to_uc001ugu.1_5end | |||
|cluster_id=chr12:125398498..125398506,- | |||
|coexpression_cluster_id=C356 | |||
|description=CAGE_peak_16_at_UBC_5end | |||
|id=chr12:125398498..125398506,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000453;3.73e-23;5!CL:0000990;3.73e-13;8!CL:0000451;7.21e-11;10!CL:0001014;1.59e-07;2!CL:0002097;1.59e-07;2!CL:0001016;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.88e-23,5;CL:0000990,4.79e-13,8;CL:0000451,8.83e-11,10;CL:0002097,1.99e-07,2;CL:0001014,2.12e-07,2;CL:0001016,2.12e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.12e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;9.12e-14;1!DOID:3350;1.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,8.58e-14,1;DOID:3350,1.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.66e-10!115;UBERON:0001004!6.33e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.12e-14;1!UBERON:0001785;9.12e-14;1!UBERON:0002464;9.12e-14;1!UBERON:0004904;9.12e-14;1!UBERON:0001021;9.12e-14;1!UBERON:0002370;1.59e-07;2!UBERON:0003127;1.59e-07;2!UBERON:0003714;1.59e-07;2!UBERON:0005162;1.59e-07;2!UBERON:0000122;1.59e-07;2!UBERON:0005058;1.59e-07;2!UBERON:0009113;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.65e-14,1;UBERON:0001785,6.65e-14,1;UBERON:0002464,6.65e-14,1;UBERON:0004904,6.65e-14,1;UBERON:0001021,6.65e-14,1;UBERON:0003902,6.65e-14,1;UBERON:0005425,6.65e-14,1;UBERON:0003714,1.36e-07,2;UBERON:0005162,1.36e-07,2;UBERON:0000122,1.36e-07,2;UBERON:0003127,1.64e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0.369754010166788,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,1.53041946185451,0.962787081228281,0,0,0,0.426224750532694,0.290209238628584,0,0,0.251248665256743,1.0429658368404,0,0,0,0.632924774881769,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0.386521706326594,0.818238361772504,0.573609190778008,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0,0.55146986366197,0.217879444092406,0.474541238222193,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.335964256397719,0.567100388969546,0.268675568108545,0,0.766765358330422,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.868687840005475,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0.0920809889358963,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,1.44257416306811,0.0915694648183434,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.31801321087491,0.86101074534246,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0.23874448473769,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0.102268682502155,0.492339221844278,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0.697118721393016,0.307801034015188,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0.242780379534093,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,1.37588825977293,0,0.0730893170861856,0,0.775912131907355,0.264768380074501,0,0,0,0,0,0.240476460754601,0,0.19980960958213,0,0,0.171594997861965,0,0.372757606696298,0,0,0,0.611989305817931,0,0.600420288709789,0.410716136675979,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,1.1248694577575,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0.662091970365432,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,0.340776043570843,0,0,0,0.129282956361551,0.13223260174269,0.342173675768659,0,0.747511887973863,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.250381861413,0,0.443716206147409,0.18628920882415,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,1.15571898244382,0.428883182749851,0,0,0.231522474323834,0.489473409012935,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0.303859956177382,0.138258436151731,4.48178710330594,1.32864840313363,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0.205116364240755,0,0.138314504928436,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0.827356886187777,0,0.078493092850514,0,0,0,0,16.7213090760468,0.142953088353313,0,0,0,0,0,0,0.691259661814092,0,0,0,0.846774100381858,0.4582137370881,0,0,0.223710863595585,0,0.121917924982269,0.647428837187895,0.615976841137482,0,0,0,0,0,0.11294608203896,0.219881033490858,0,0.0771741581079447,0,0.470317296361523,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.45120521581504,0,0.178553938605658,0,0,0,0,0.143339583151451,0.157771562193185,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0.18378979906969,0,0.151557396436479,0,0,0.20686599172379,0.426467963801962,0,0,1.73809200028402,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.202056159043763,0,1.33064142618405,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0.369754010166788,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,1.53041946185451,0.962787081228281,0,0,0,0.426224750532694,0.290209238628584,0,0,0.251248665256743,1.0429658368404,0,0,0,0.632924774881769,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0.386521706326594,0.818238361772504,0.573609190778008,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0,0.55146986366197,0.217879444092406,0.474541238222193,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.335964256397719,0.567100388969546,0.268675568108545,0,0.766765358330422,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.868687840005475,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0.0920809889358963,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,1.44257416306811,0.0915694648183434,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.31801321087491,0.86101074534246,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0.23874448473769,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0.102268682502155,0.492339221844278,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0.697118721393016,0.307801034015188,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0.242780379534093,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,1.37588825977293,0,0.0730893170861856,0,0.775912131907355,0.264768380074501,0,0,0,0,0,0.240476460754601,0,0.19980960958213,0,0,0.171594997861965,0,0.372757606696298,0,0,0,0.611989305817931,0,0.600420288709789,0.410716136675979,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,1.1248694577575,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0.662091970365432,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,0.340776043570843,0,0,0,0.129282956361551,0.13223260174269,0.342173675768659,0,0.747511887973863,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.250381861413,0,0.443716206147409,0.18628920882415,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,1.15571898244382,0.428883182749851,0,0,0.231522474323834,0.489473409012935,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0.303859956177382,0.138258436151731,4.48178710330594,1.32864840313363,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0.205116364240755,0,0.138314504928436,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0.827356886187777,0,0.078493092850514,0,0,0,0,16.7213090760468,0.142953088353313,0,0,0,0,0,0,0.691259661814092,0,0,0,0.846774100381858,0.4582137370881,0,0,0.223710863595585,0,0.121917924982269,0.647428837187895,0.615976841137482,0,0,0,0,0,0.11294608203896,0.219881033490858,0,0.0771741581079447,0,0.470317296361523,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.45120521581504,0,0.178553938605658,0,0,0,0,0.143339583151451,0.157771562193185,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0.18378979906969,0,0.151557396436479,0,0,0.20686599172379,0.426467963801962,0,0,1.73809200028402,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.202056159043763,0,1.33064142618405,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | ||
|short_description=p16@UBC | |||
}} | }} |
Latest revision as of 04:44, 17 September 2015
Short description: | p16@UBC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_UBC_5end |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | -178bp_to_uc001ugu.1_5end |
EntrezGene: | UBC |
HGNC: | 12468 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.88e-23 | 5 |
conventional dendritic cell | 4.79e-13 | 8 |
dendritic cell | 8.83e-11 | 10 |
cortical cell of adrenal gland | 1.99e-07 | 2 |
CD1a-positive Langerhans cell | 2.12e-07 | 2 |
immature CD1a-positive Langerhans cell | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.65e-14 | 1 |
cranial nerve | 6.65e-14 | 1 |
nerve trunk | 6.65e-14 | 1 |
nerve connecting eye with brain | 6.65e-14 | 1 |
nerve | 6.65e-14 | 1 |
retinal neural layer | 6.65e-14 | 1 |
presumptive neural retina | 6.65e-14 | 1 |
neural tissue | 1.36e-07 | 2 |
multi cell component structure | 1.36e-07 | 2 |
neuron projection bundle | 1.36e-07 | 2 |
open tracheal system trachea | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 8.58e-14 | 1 |
mesenchymal cell neoplasm | 1.54e-07 | 2 |