FFCP PHASE1:Hg19::chr12:123360385..123360393,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr12:123360385..123360393,- to FFCP PHASE1:Hg19::chr12:123360385..123360393,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:123360385..123360393,- | |||
|description=CAGE_peak_at_chr12:123360385..123360393,- | |||
|id=chr12:123360385..123360393,- | |||
|ontology_enrichment_celltype=CL:0002057!8.19e-14!42;CL:0000738!5.01e-13!140;CL:0000860!3.94e-12!45;CL:0000037!1.56e-11!172;CL:0000566!1.56e-11!172;CL:0002087!1.60e-11!119;CL:0002031!3.30e-11!124;CL:0000988!5.29e-11!182;CL:0002032!1.63e-10!165;CL:0000837!1.63e-10!165;CL:0000766!1.78e-10!76;CL:0000557!1.73e-09!71;CL:0000839!6.00e-09!70;CL:0002009!1.16e-08!65;CL:0002194!1.98e-08!63;CL:0000576!1.98e-08!63;CL:0000040!1.98e-08!63;CL:0000559!1.98e-08!63;CL:0000763!3.74e-08!112;CL:0000049!3.74e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.10e-15;5!CL:0000860;1.42e-12;33!CL:0002057;1.42e-12;33!CL:0000624;4.87e-12;6!CL:0000473;1.70e-11;39!CL:0000234;1.70e-11;39!CL:0000766;6.66e-09;69!CL:0000163;1.29e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.73e-17,136;CL:0000766,1.29e-15,72;CL:0002031,2.69e-15,120;CL:0000097,3.93e-15,5;CL:0002028,3.93e-15,5;CL:0000839,1.64e-14,66;CL:0000557,2.88e-14,67;CL:0000860,2.11e-13,42;CL:0002057,2.11e-13,42;CL:0000037,4.27e-13,168;CL:0000988,2.95e-12,177;CL:0002032,3.60e-12,161;CL:0000837,3.60e-12,161;CL:0002087,4.23e-12,115;CL:0000624,4.61e-12,6;CL:0000473,1.47e-11,48;CL:0000234,1.47e-11,48;CL:0000763,1.10e-09,108;CL:0000049,1.10e-09,108;CL:0002194,5.57e-09,59;CL:0000576,5.57e-09,59;CL:0000040,5.57e-09,59;CL:0000559,5.57e-09,59;CL:0002009,1.20e-08,61;CL:0000163,1.26e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-10;42!UBERON:0005754;5.51e-09;1!UBERON:0005425;5.51e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.20e-08!86;UBERON:0002371!2.72e-08!80;UBERON:0002390!5.26e-08!102;UBERON:0003061!5.26e-08!102;UBERON:0002193!5.02e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;5.51e-09;1!UBERON:0000941;5.51e-09;1!UBERON:0001785;5.51e-09;1!UBERON:0002464;5.51e-09;1!UBERON:0004904;5.51e-09;1!UBERON:0006868;5.51e-09;1!UBERON:0001021;5.51e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.36e-12,76;UBERON:0001474,2.62e-11,82;UBERON:0002390,7.05e-11,98;UBERON:0003061,7.05e-11,98;UBERON:0004765,3.96e-10,90;UBERON:0002405,9.74e-10,93;UBERON:0002193,1.15e-09,108;UBERON:0000941,3.31e-09,1;UBERON:0001785,3.31e-09,1;UBERON:0002464,3.31e-09,1;UBERON:0004904,3.31e-09,1;UBERON:0001021,3.31e-09,1;UBERON:0003902,3.31e-09,1;UBERON:0005425,3.31e-09,1;UBERON:0000998,4.54e-09,1;UBERON:0006868,4.54e-09,1;UBERON:0001434,6.44e-09,100 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0.164201178899891,0,0,0.767658796194425,0.928896739896456,0,0.30120591877825,0,0,0,0.293600439334847,0,1.20326668482085,0.217010870715852,0,0,0,0,0,0.485168122375632,0.232429036905685,0.411167888021826,0.619412741790207,0.575384784644301,1.5369642391746,0.47296445977717,1.03423704220986,1.93645405075148,1.35426486594342,0.752969358170419,0.545812300115692,0.674170453335254,0.612167784741805,0.320929027076094,0.639337125799041,0,0,0,1.16083695451434,2.26954089876456,1.24564449799115,1.00499466102697,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0.419317291016752,0.561643155732475,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,3.98449078376614,0,0.764546456250458,0,0,0.526768169550154,0.786839080455332,1.17903228824749,1.23360899399706,0,1.30368906653436,0,0,0.222820913770347,0.294605907474837,0.443067789167242,0.270803863765016,0,0.130059347559878,0.493313713811028,0.276350017785848,0,0.593146252648242,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,2.90259361757081,4.61183850934277,2.27236380167484,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0.788123040807709,1.07813787429759,0.385029108839245,0,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.72571360654893,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.638063562472921,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.432807638929335,0.213425530045242,0.159426272728822,0.399158742865633,0,0.211673582723883,0,0.561594356226918,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0.222617410045812,0,0,0.19924798825107,0.552567831062295,0,0,0.246169610922139,0,0.0898683511473268,0.537063524026827,0,0,0,0,0.969332746095218,0,0,0,0.0874599999961957,0.724999575434793,0.227586896570999,0.254253650292766,0,0,0.291604613383254,0,0,0.60298219312704,0,0.110579259931225,0.295547618953547,0.438770794307945,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0.664846727600626,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0.104421949505455,0.202203398942031,0,0,0,0.19566461893209,0,0,1.20990716048664,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0.330991955875499,0,0,0.284609546029793,0.277349346026277,0,0.0979923974143777,0.174118413160805,0.17472666824203,0,0,0,0,0.0969890164884194,0.264768380074501,0.225980740780532,0.274083849293502,0.19871461170299,0,0,0.0801588202515337,0,0,0.144090417154106,0.114536596165916,0.171594997861965,0.14405479798815,0.124252535565433,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.196854963029498,0,0,0,0,0,0,0.899895566206002,0,0,0,0.0788057072991982,0.104909176269996,0.105600336519406,0,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0.395223263795889,0,0,0,0,0,0,0.157054096250234,0,0,0.250381861413,0.573409195690071,0,0.124192805882767,0,0,0,0.285465333544967,0.235265819698172,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0.38582807654183,0,0,0,0,0,0,0,0.327130788511688,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0.109209638192014,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0.478901577171454,0,0,0,0,1.42769420259154,0.196295437002051,0,0,0.231051332300676,0,0,0.198916222116275,0.0752103283492573,0,0,0.2619066944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| ||
|short_description=p@chr12:123360385..123360393,- | |||
}} | }} |
Latest revision as of 06:10, 24 July 2015
Short description: | p@chr12:123360385..123360393, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:123360385..123360393, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.73e-17 | 136 |
myeloid leukocyte | 1.29e-15 | 72 |
hematopoietic lineage restricted progenitor cell | 2.69e-15 | 120 |
mast cell | 3.93e-15 | 5 |
basophil mast progenitor cell | 3.93e-15 | 5 |
myeloid lineage restricted progenitor cell | 1.64e-14 | 66 |
granulocyte monocyte progenitor cell | 2.88e-14 | 67 |
classical monocyte | 2.11e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.11e-13 | 42 |
hematopoietic stem cell | 4.27e-13 | 168 |
hematopoietic cell | 2.95e-12 | 177 |
hematopoietic oligopotent progenitor cell | 3.60e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.60e-12 | 161 |
nongranular leukocyte | 4.23e-12 | 115 |
CD4-positive, alpha-beta T cell | 4.61e-12 | 6 |
defensive cell | 1.47e-11 | 48 |
phagocyte | 1.47e-11 | 48 |
myeloid cell | 1.10e-09 | 108 |
common myeloid progenitor | 1.10e-09 | 108 |
monopoietic cell | 5.57e-09 | 59 |
monocyte | 5.57e-09 | 59 |
monoblast | 5.57e-09 | 59 |
promonocyte | 5.57e-09 | 59 |
macrophage dendritic cell progenitor | 1.20e-08 | 61 |
endocrine cell | 1.26e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.36e-12 | 76 |
bone element | 2.62e-11 | 82 |
hematopoietic system | 7.05e-11 | 98 |
blood island | 7.05e-11 | 98 |
skeletal element | 3.96e-10 | 90 |
immune system | 9.74e-10 | 93 |
hemolymphoid system | 1.15e-09 | 108 |
cranial nerve II | 3.31e-09 | 1 |
cranial nerve | 3.31e-09 | 1 |
nerve trunk | 3.31e-09 | 1 |
nerve connecting eye with brain | 3.31e-09 | 1 |
nerve | 3.31e-09 | 1 |
retinal neural layer | 3.31e-09 | 1 |
presumptive neural retina | 3.31e-09 | 1 |
seminal vesicle | 4.54e-09 | 1 |
seminal fluid secreting gland | 4.54e-09 | 1 |
skeletal system | 6.44e-09 | 100 |