FFCP PHASE1:Hg19::chr12:116715460..116715476,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:116715460..116715476,- to FFCP PHASE1:Hg19::chr12:116715460..116715476,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23389 | |EntrezGene=23389 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22962 | |HGNC=22962 | ||
|TSSclassifier=strong | |||
|UniProt=Q71F56 | |UniProt=Q71F56 | ||
|association_with_transcript=-317bp_to_ENST00000281928_5end | |||
|cluster_id=chr12:116715460..116715476,- | |||
|coexpression_cluster_id=C3073 | |||
|description=CAGE_peak_4_at_MED13L_5end | |||
|id=chr12:116715460..116715476,- | |||
|ontology_enrichment_celltype=CL:0002057!1.23e-15!42;CL:0000860!5.78e-13!45;CL:0000766!1.78e-10!76;CL:0000763!4.15e-10!112;CL:0000049!4.15e-10!112;CL:0002009!1.86e-09!65;CL:0002194!1.05e-08!63;CL:0000576!1.05e-08!63;CL:0000040!1.05e-08!63;CL:0000559!1.05e-08!63;CL:0000557!2.99e-08!71;CL:0000839!1.33e-07!70;CL:0000738!1.62e-07!140;CL:0000037!7.09e-07!172;CL:0000566!7.09e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.10e-11;33!CL:0002057;3.10e-11;33!CL:0000576;1.66e-09;48!CL:0000473;2.39e-07;39!CL:0000234;2.39e-07;39!CL:0000094;3.25e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.90e-16,42;CL:0002057,1.90e-16,42;CL:0000766,4.27e-13,72;CL:0000473,6.99e-13,48;CL:0000234,6.99e-13,48;CL:0002009,5.82e-12,61;CL:0000763,6.55e-12,108;CL:0000049,6.55e-12,108;CL:0002194,4.42e-11,59;CL:0000576,4.42e-11,59;CL:0000040,4.42e-11,59;CL:0000559,4.42e-11,59;CL:0000557,1.80e-10,67;CL:0000839,1.09e-09,66;CL:0000738,1.22e-09,136;CL:0000037,2.37e-08,168;CL:0002032,2.81e-07,161;CL:0000837,2.81e-07,161;CL:0000988,5.40e-07,177;CL:0000094,6.21e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.06e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-14!115;UBERON:0002390!3.11e-09!102;UBERON:0003061!3.11e-09!102;UBERON:0002193!3.90e-08!112;UBERON:0002371!2.54e-07!80;UBERON:0001474!7.02e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.03e-14,114;UBERON:0002390,3.54e-11,98;UBERON:0003061,3.54e-11,98;UBERON:0002193,1.94e-09,108;UBERON:0002371,5.99e-09,76;UBERON:0001474,3.02e-08,82;UBERON:0002405,7.50e-08,93;UBERON:0001434,3.98e-07,100;UBERON:0004765,5.43e-07,90 | |||
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| ||
|short_description=p4@MED13L | |||
}} | }} |
Latest revision as of 15:24, 16 September 2015
Short description: | p4@MED13L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MED13L_5end |
Coexpression cluster: | C3073_Eosinophils_Neutrophils_granulocyte_cerebellum_CD14_parietal_vagina |
Association with transcript: | -317bp_to_ENST00000281928_5end |
EntrezGene: | MED13L |
HGNC: | 22962 |
UniProt: | Q71F56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.90e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.90e-16 | 42 |
myeloid leukocyte | 4.27e-13 | 72 |
defensive cell | 6.99e-13 | 48 |
phagocyte | 6.99e-13 | 48 |
macrophage dendritic cell progenitor | 5.82e-12 | 61 |
myeloid cell | 6.55e-12 | 108 |
common myeloid progenitor | 6.55e-12 | 108 |
monopoietic cell | 4.42e-11 | 59 |
monocyte | 4.42e-11 | 59 |
monoblast | 4.42e-11 | 59 |
promonocyte | 4.42e-11 | 59 |
granulocyte monocyte progenitor cell | 1.80e-10 | 67 |
myeloid lineage restricted progenitor cell | 1.09e-09 | 66 |
leukocyte | 1.22e-09 | 136 |
hematopoietic stem cell | 2.37e-08 | 168 |
hematopoietic oligopotent progenitor cell | 2.81e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.81e-07 | 161 |
hematopoietic cell | 5.40e-07 | 177 |
granulocyte | 6.21e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.03e-14 | 114 |
hematopoietic system | 3.54e-11 | 98 |
blood island | 3.54e-11 | 98 |
hemolymphoid system | 1.94e-09 | 108 |
bone marrow | 5.99e-09 | 76 |
bone element | 3.02e-08 | 82 |
immune system | 7.50e-08 | 93 |
skeletal system | 3.98e-07 | 100 |
skeletal element | 5.43e-07 | 90 |