FFCP PHASE1:Hg19::chr12:113376261..113376324,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:113376261..113376324,+ to FFCP PHASE1:Hg19::chr12:113376261..113376324,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4940 | |EntrezGene=4940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8088 | |HGNC=8088 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWB8,F8VS35 | |UniProt=F5GWB8,F8VS35 | ||
|association_with_transcript=0bp_to_ENST00000323881,ENST00000548514_5end | |||
|cluster_id=chr12:113376261..113376324,+ | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_1_at_OAS3_5end | |||
|id=chr12:113376261..113376324,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.58e-23!76;CL:0000860!4.78e-22!45;CL:0002057!1.17e-21!42;CL:0002194!1.28e-21!63;CL:0000576!1.28e-21!63;CL:0000040!1.28e-21!63;CL:0000559!1.28e-21!63;CL:0002009!5.07e-21!65;CL:0000557!3.34e-19!71;CL:0000839!1.98e-18!70;CL:0000738!3.37e-15!140;CL:0002087!3.52e-15!119;CL:0002031!3.39e-13!124;CL:0000763!4.47e-09!112;CL:0000049!4.47e-09!112;CL:0000037!4.55e-08!172;CL:0000566!4.55e-08!172;CL:0002032!1.12e-07!165;CL:0000837!1.12e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.37e-16;33!CL:0002057;3.37e-16;33!CL:0000473;2.25e-15;39!CL:0000234;2.25e-15;39!CL:0000576;5.76e-14;48!CL:0000766;4.05e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.03e-23,48;CL:0000234,1.03e-23,48;CL:0000766,2.27e-23,72;CL:0002194,6.80e-22,59;CL:0000576,6.80e-22,59;CL:0000040,6.80e-22,59;CL:0000559,6.80e-22,59;CL:0000860,7.14e-22,42;CL:0002057,7.14e-22,42;CL:0002009,3.00e-21,61;CL:0000557,2.65e-19,67;CL:0000839,1.17e-18,66;CL:0002087,2.14e-15,115;CL:0000738,3.19e-15,136;CL:0002031,1.89e-13,120;CL:0000763,4.93e-09,108;CL:0000049,4.93e-09,108;CL:0000037,3.35e-08,168;CL:0002032,8.19e-08,161;CL:0000837,8.19e-08,161 | |||
|ontology_enrichment_development_v019=CL:0002057;7.75e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.89e-19!102;UBERON:0003061!5.89e-19!102;UBERON:0002193!1.52e-18!112;UBERON:0002371!3.27e-15!80;UBERON:0001474!2.48e-13!86;UBERON:0002405!4.80e-13!115;UBERON:0004765!1.58e-12!101;UBERON:0001434!1.58e-12!101;UBERON:0003081!1.08e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.61e-19,98;UBERON:0003061,3.61e-19,98;UBERON:0002193,1.13e-18,108;UBERON:0002405,4.54e-17,93;UBERON:0002371,1.52e-15,76;UBERON:0001474,2.12e-13,82;UBERON:0004765,1.47e-11,90;UBERON:0001434,4.94e-11,100;UBERON:0003081,2.62e-07,203 | |||
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| ||
|short_description=p1@OAS3 | |||
}} | }} |
Latest revision as of 11:46, 16 September 2015
Short description: | p1@OAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OAS3_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_ENST00000323881, ENST00000548514_5end |
EntrezGene: | OAS3 |
HGNC: | 8088 |
UniProt: | F5GWB8F8VS35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.03e-23 | 48 |
phagocyte | 1.03e-23 | 48 |
myeloid leukocyte | 2.27e-23 | 72 |
monopoietic cell | 6.80e-22 | 59 |
monocyte | 6.80e-22 | 59 |
monoblast | 6.80e-22 | 59 |
promonocyte | 6.80e-22 | 59 |
classical monocyte | 7.14e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.14e-22 | 42 |
macrophage dendritic cell progenitor | 3.00e-21 | 61 |
granulocyte monocyte progenitor cell | 2.65e-19 | 67 |
myeloid lineage restricted progenitor cell | 1.17e-18 | 66 |
nongranular leukocyte | 2.14e-15 | 115 |
leukocyte | 3.19e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.89e-13 | 120 |
myeloid cell | 4.93e-09 | 108 |
common myeloid progenitor | 4.93e-09 | 108 |
hematopoietic stem cell | 3.35e-08 | 168 |
hematopoietic oligopotent progenitor cell | 8.19e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.19e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.61e-19 | 98 |
blood island | 3.61e-19 | 98 |
hemolymphoid system | 1.13e-18 | 108 |
immune system | 4.54e-17 | 93 |
bone marrow | 1.52e-15 | 76 |
bone element | 2.12e-13 | 82 |
skeletal element | 1.47e-11 | 90 |
skeletal system | 4.94e-11 | 100 |
lateral plate mesoderm | 2.62e-07 | 203 |