FFCP PHASE1:Hg19::chr12:109250524..109250549,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:109250524..109250549,+ to FFCP PHASE1:Hg19::chr12:109250524..109250549,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:109250524..109250549,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr12:109250524..109250549,+ | |||
|id=chr12:109250524..109250549,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.24e-23!42;CL:0000860!3.78e-23!45;CL:0000048!3.46e-18!430;CL:0000034!1.61e-17!444;CL:0000723!2.10e-17!436;CL:0000738!2.42e-17!140;CL:0000134!4.02e-17!358;CL:0000766!6.04e-17!76;CL:0002320!4.07e-16!365;CL:0000557!4.62e-15!71;CL:0002009!8.21e-15!65;CL:0000219!1.55e-14!390;CL:0002194!1.60e-13!63;CL:0000576!1.60e-13!63;CL:0000040!1.60e-13!63;CL:0000559!1.60e-13!63;CL:0000839!2.38e-13!70;CL:0000003!7.97e-13!722;CL:0000012!1.52e-12!682;CL:0000548!9.16e-12!679;CL:0000004!9.16e-12!679;CL:0000255!9.16e-12!679;CL:0002031!2.92e-11!124;CL:0002087!3.05e-11!119;CL:0002371!3.50e-11!591;CL:0000144!5.14e-11!625;CL:0000063!1.18e-09!578;CL:0000037!1.65e-09!172;CL:0000566!1.65e-09!172;CL:0000988!2.66e-09!182;CL:0000763!4.43e-09!112;CL:0000049!4.43e-09!112;CL:0002032!4.86e-08!165;CL:0000837!4.86e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.49e-52;33!CL:0002057;8.49e-52;33!CL:0000473;8.77e-36;39!CL:0000234;8.77e-36;39!CL:0000576;1.96e-29;48!CL:0000766;6.85e-23;69!CL:0002087;9.67e-12;104!CL:0000763;1.23e-10;100!CL:0000738;2.31e-10;136!CL:0000094;7.10e-10;8!CL:0000623;1.42e-08;3!CL:0000767;2.56e-08;3!CL:0000219;4.69e-08;193!CL:0000226;5.45e-08;3!CL:0000842;5.45e-08;3!CL:0000784;1.38e-07;3!CL:0000451;4.94e-07;10!CL:0002393;5.61e-07;6!CL:0002397;5.61e-07;6!CL:0000081;5.85e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.35e-56,42;CL:0002057,3.35e-56,42;CL:0000766,2.55e-50,72;CL:0000738,1.32e-48,136;CL:0000473,7.74e-48,48;CL:0000234,7.74e-48,48;CL:0000557,1.80e-44,67;CL:0002009,3.24e-42,61;CL:0000839,4.48e-40,66;CL:0002194,1.39e-38,59;CL:0000576,1.39e-38,59;CL:0000040,1.39e-38,59;CL:0000559,1.39e-38,59;CL:0000037,3.47e-36,168;CL:0000763,1.19e-34,108;CL:0000049,1.19e-34,108;CL:0002031,1.57e-33,120;CL:0000988,1.67e-33,177;CL:0002087,2.55e-32,115;CL:0002032,1.11e-30,161;CL:0000837,1.11e-30,161;CL:0000134,1.05e-22,354;CL:0002320,6.93e-22,361;CL:0000219,1.27e-20,386;CL:0000034,1.01e-19,441;CL:0000048,2.57e-19,427;CL:0000723,9.08e-19,433;CL:0000094,5.49e-10,8;CL:0000623,1.41e-08,3;CL:0000825,1.41e-08,3;CL:0000767,2.51e-08,3;CL:0000226,5.46e-08,3;CL:0000842,5.46e-08,3;CL:0000784,1.40e-07,3;CL:0000451,4.32e-07,10;CL:0000081,4.89e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.45e-42;42!CL:0000049;6.80e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.91e-15!375;UBERON:0002371!2.12e-14!80;UBERON:0001474!1.67e-13!86;UBERON:0002390!4.65e-13!102;UBERON:0003061!4.65e-13!102;UBERON:0004765!1.49e-11!101;UBERON:0001434!1.49e-11!101;UBERON:0002193!1.30e-10!112;UBERON:0002204!4.05e-10!167;UBERON:0002405!5.43e-09!115;UBERON:0003081!5.74e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.58e-42,76;UBERON:0001474,2.81e-40,82;UBERON:0002390,1.78e-37,98;UBERON:0003061,1.78e-37,98;UBERON:0004765,1.31e-35,90;UBERON:0002405,4.95e-34,93;UBERON:0002193,8.45e-33,108;UBERON:0001434,7.93e-31,100;UBERON:0002384,9.07e-21,371;UBERON:0003081,2.81e-19,203;UBERON:0002204,2.00e-17,167;UBERON:0000926,2.06e-10,315;UBERON:0004120,2.06e-10,315;UBERON:0006603,2.06e-10,315 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0,0,0.305653622991805,0,0.314843125254717,20.0615781192941,7.67658796194425,12.23047374197,0.919421224478927,0,0.369754010166788,0,0,0,53.1835592190602,32.2876560426928,27.777391451629,0,0,0,0.581592955118259,1.13362783106643,1.21292030593908,2.09186133215116,4.11167888021826,4.02618282163635,9.49384894663097,16.1381245113333,19.8645073106412,19.3057581212506,18.0735711403471,9.47985406160392,2.07066573496865,4.63940455098338,3.82029923556644,19.2832852193669,42.3626315740444,28.7701706609569,2.63881040149373,7.38015533200038,2.55734850319616,3.19230162491442,7.94339314567596,6.22822248995575,4.01997864410789,9.38669253156363,8.68755378820467,1.21079900526674,5.89244217580104,4.43047342417238,0.422510572623884,2.55125159958052,0,1.12328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.382273228125229,1.32171328579026,4.48406850385229,0,0.786839080455332,3.14408610199332,0.822405995998037,0.167186495390678,0,0,0,0.557052284425868,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.390178042679635,0,0,0,0.14828656316206,0,0,0,3.06576394881537,0.68725489096526,1.01207876807801,0,0,0,0,0,0,0,0,12.0964045934839,7.48832548193821,7.09639579025715,0,0,0.255725123687061,0,0.50133791063589,0.144846518960824,0.795285947051099,1.45990461090791,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,3.57735936458013,6.29194401858141,3.34311751196608,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,3.87780264148325,0,0.496971951695318,0.25326102332916,1.19168262731897,2.29469296599051,1.06400514659507,0,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.300476117813194,0.453728732640084,2.33206526395521,0,0.211931901159562,0.900273288253207,0.309157587715317,0.772921620136887,0.18611685633159,0.675105328965065,0.389748020644795,0.504867548488229,0.368199594569197,0.161646056818812,0.710019185033229,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,2.76269842704961,0.464367928031979,0,0.236613600079688,0,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0.93733833986777,0,0,0.0895585227028483,0.290633938513962,0,0,0,3.7319060797339,1.58531948758658,1.51490920111656,0,1.14596527667483,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,1.41849132023278,0,0.57191197463259,0,0,0,1.06617584622764,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,24.0377527446351,21.7783850608112,18.353054188004,0,1.30139853857622,0,0,0,1.49801404789436,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0,0.117141414992713,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,5.16920065307218,7.76571122947021,8.00456683525833,0,0,0,0,1.84154367945675,0,0.384417447767103,0.511707249066704,0,0,0.308419387605311,0.177561725313127,0.657017248110473,0.519254429183621,0.813472649219715,0,0.200506470303285,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0,0,0,0,0,0,5.66662224295152,0.6970372701606,0.308033580176089,0,1.73986598415015,0.18532421910392,0.429374660225974,0.744316738719335,0,0,0,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0,0,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0,0.141405431953713,0,1.10273068709225,0,0.438450885253763,0,0.655894752046633,0.608731130888112,0.92947049429925,0,0.143411352204052,0,0.35667105148125,0.709522128141196,0.422215270595328,0,0.379473173765715,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0.284136146806413,0.23874448473769,0.890894042497916,0.614321404198464,0,0.140669416410513,0.222617410045812,0.16480387422676,0,0,0,0,0,0.246169610922139,0.311039587661807,0.269605053441981,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,1.11538995422883,0,0.227884111694002,0,0,0,0.638002319463839,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.889563386041866,0.370691816839509,0.313265848516366,0,0,0,0,0.19566461893209,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.347119476670262,1.27390116638691,0.522355239482415,0,0.171986032471617,0.290268993867255,0,0.246346371159628,0,0,0,0,0,0.189932387867636,0,0.240476460754601,0,0.19980960958213,0,0,0,0,0.372757606696298,0.235694034616795,0.135904206073614,0.209205692624666,1.22397861163586,0,0,0,0,0,0.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| ||
|short_description=p@chr12:109250524..109250549,+ | |||
}} | }} |
Latest revision as of 04:41, 24 July 2015
Short description: | p@chr12:109250524..109250549, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109250524..109250549, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.58e-42 | 76 |
bone element | 2.81e-40 | 82 |
hematopoietic system | 1.78e-37 | 98 |
blood island | 1.78e-37 | 98 |
skeletal element | 1.31e-35 | 90 |
immune system | 4.95e-34 | 93 |
hemolymphoid system | 8.45e-33 | 108 |
skeletal system | 7.93e-31 | 100 |
connective tissue | 9.07e-21 | 371 |
lateral plate mesoderm | 2.81e-19 | 203 |
musculoskeletal system | 2.00e-17 | 167 |
mesoderm | 2.06e-10 | 315 |
mesoderm-derived structure | 2.06e-10 | 315 |
presumptive mesoderm | 2.06e-10 | 315 |