FFCP PHASE1:Hg19::chr12:105629982..105630010,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:105629982..105630010,- to FFCP PHASE1:Hg19::chr12:105629982..105630010,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55198 | |EntrezGene=55198 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18242 | |HGNC=18242 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1P5,Q8NEU8 | |UniProt=F8W1P5,Q8NEU8 | ||
|association_with_transcript=0bp_to_NM_001251904,NM_018171,uc001tlf.1,uc001tlg.1,uc010swu.1_5end | |||
|cluster_id=chr12:105629982..105630010,- | |||
|description=CAGE_peak_2_at_APPL2_5end | |||
|id=chr12:105629982..105630010,- | |||
|ontology_enrichment_celltype=CL:0000542!6.52e-15!53;CL:0000051!6.52e-15!53;CL:0000838!7.02e-15!52;CL:0000791!1.63e-10!18;CL:0000789!1.63e-10!18;CL:0002420!1.63e-10!18;CL:0002419!1.63e-10!18;CL:0000790!1.63e-10!18;CL:0000084!5.47e-10!25;CL:0000827!5.47e-10!25;CL:0000236!2.93e-07!14;CL:0000625!9.49e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.84e-11;18!CL:0000789;7.84e-11;18!CL:0002419;7.84e-11;18!CL:0000084;2.27e-10;25!CL:0000542;3.01e-09;53!CL:0000236;1.46e-07;13!CL:0000625;6.73e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.32e-15,53;CL:0000051,9.32e-15,53;CL:0000838,1.01e-14,52;CL:0000791,1.06e-10,18;CL:0000789,1.06e-10,18;CL:0002420,1.06e-10,18;CL:0002419,1.06e-10,18;CL:0000790,1.06e-10,18;CL:0000084,3.64e-10,25;CL:0000827,3.64e-10,25;CL:0000236,2.22e-07,14;CL:0000625,7.37e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;7.84e-11;18!CL:0000051;3.01e-09;53 | |||
|ontology_enrichment_disease=DOID:3095!5.68e-07!22;DOID:2994!5.68e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.57e-07;22!DOID:2994;9.57e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.36e-07,22;DOID:2994,4.36e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@APPL2 | |||
}} | }} |
Latest revision as of 01:24, 16 September 2015
Short description: | p2@APPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APPL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001251904, NM_018171, uc001tlf.1, uc001tlg.1, uc010swu.1_5end |
EntrezGene: | APPL2 |
HGNC: | 18242 |
UniProt: | F8W1P5Q8NEU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.32e-15 | 53 |
common lymphoid progenitor | 9.32e-15 | 53 |
lymphoid lineage restricted progenitor cell | 1.01e-14 | 52 |
mature alpha-beta T cell | 1.06e-10 | 18 |
alpha-beta T cell | 1.06e-10 | 18 |
immature T cell | 1.06e-10 | 18 |
mature T cell | 1.06e-10 | 18 |
immature alpha-beta T cell | 1.06e-10 | 18 |
T cell | 3.64e-10 | 25 |
pro-T cell | 3.64e-10 | 25 |
B cell | 2.22e-07 | 14 |
CD8-positive, alpha-beta T cell | 7.37e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.36e-07 | 22 |
germ cell cancer | 4.36e-07 | 22 |