FFCP PHASE1:Hg19::chr11:96123022..96123090,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:96123022..96123090,- to FFCP PHASE1:Hg19::chr11:96123022..96123090,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79780 | |EntrezGene=79780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26282 | |HGNC=26282 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N4S0 | |UniProt=Q8N4S0 | ||
|association_with_transcript=0bp_to_ENST00000524836,ENST00000525786,ENST00000542662,NM_024725,uc001pfx.3,uc009ywr.2,uc009ywt.1_5end | |||
|cluster_id=chr11:96123022..96123090,- | |||
|description=CAGE_peak_1_at_CCDC82_5end | |||
|id=chr11:96123022..96123090,- | |||
|ontology_enrichment_celltype=CL:0000738!9.91e-23!140;CL:0002031!1.04e-19!124;CL:0000037!1.13e-17!172;CL:0000566!1.13e-17!172;CL:0002087!1.33e-16!119;CL:0002032!1.60e-16!165;CL:0000837!1.60e-16!165;CL:0000766!8.99e-15!76;CL:0000988!9.07e-15!182;CL:0000557!1.60e-13!71;CL:0000839!1.68e-13!70;CL:0002057!2.45e-12!42;CL:0002009!1.09e-11!65;CL:0002194!6.00e-11!63;CL:0000576!6.00e-11!63;CL:0000040!6.00e-11!63;CL:0000559!6.00e-11!63;CL:0000860!9.55e-11!45;CL:0000763!9.83e-11!112;CL:0000049!9.83e-11!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.87e-09;33!CL:0002057;1.87e-09;33!CL:0000576;1.35e-08;48!CL:0000766;2.23e-08;69!CL:0000473;4.13e-08;39!CL:0000234;4.13e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.77e-24,136;CL:0002031,7.32e-21,120;CL:0000037,1.69e-18,168;CL:0002087,1.22e-17,115;CL:0002032,2.49e-17,161;CL:0000837,2.49e-17,161;CL:0000766,3.98e-16,72;CL:0000988,6.72e-16,177;CL:0000557,7.48e-15,67;CL:0000839,7.60e-15,66;CL:0002009,5.90e-13,61;CL:0000860,2.45e-12,42;CL:0002057,2.45e-12,42;CL:0002194,3.54e-12,59;CL:0000576,3.54e-12,59;CL:0000040,3.54e-12,59;CL:0000559,3.54e-12,59;CL:0000473,4.74e-12,48;CL:0000234,4.74e-12,48;CL:0000763,1.65e-11,108;CL:0000049,1.65e-11,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.55e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.90e-23!57;UBERON:0005068!1.90e-23!57;UBERON:0006241!1.90e-23!57;UBERON:0007135!1.90e-23!57;UBERON:0007023!9.93e-22!115;UBERON:0001017!5.75e-21!82;UBERON:0000073!1.03e-20!94;UBERON:0001016!1.03e-20!94;UBERON:0002780!1.31e-20!41;UBERON:0001890!1.31e-20!41;UBERON:0006240!1.31e-20!41;UBERON:0003080!2.36e-20!42;UBERON:0002616!1.87e-19!59;UBERON:0005743!3.33e-19!86;UBERON:0000955!9.13e-19!69;UBERON:0006238!9.13e-19!69;UBERON:0002020!1.30e-16!34;UBERON:0003528!1.30e-16!34;UBERON:0001893!2.44e-16!34;UBERON:0002791!6.26e-16!33;UBERON:0001869!3.48e-15!32;UBERON:0002346!2.18e-14!90;UBERON:0003075!6.55e-14!86;UBERON:0007284!6.55e-14!86;UBERON:0002390!1.51e-13!102;UBERON:0003061!1.51e-13!102;UBERON:0001474!6.79e-12!86;UBERON:0002371!8.13e-12!80;UBERON:0000956!1.67e-11!25;UBERON:0000203!1.67e-11!25;UBERON:0002193!1.82e-11!112;UBERON:0002619!2.56e-11!22;UBERON:0003056!1.92e-10!61;UBERON:0004765!2.21e-10!101;UBERON:0001434!2.21e-10!101;UBERON:0001950!3.65e-10!20;UBERON:0000153!2.13e-07!129;UBERON:0007811!2.13e-07!129;UBERON:0000033!5.27e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.53e-15;41!UBERON:0001890;3.53e-15;41!UBERON:0003528;3.29e-14;34!UBERON:0002020;3.29e-14;34!UBERON:0002791;3.79e-14;32!UBERON:0001893;5.90e-14;34!UBERON:0001869;6.79e-14;32!UBERON:0000073;2.82e-13;53!UBERON:0002616;2.82e-13;53!UBERON:0000956;1.65e-11;25!UBERON:0000203;1.65e-11;25!UBERON:0002619;2.13e-11;22!UBERON:0001950;3.08e-10;20!UBERON:0001017;1.30e-09;75!UBERON:0001016;2.63e-09;83!UBERON:0000955;5.42e-09;68!UBERON:0007023;7.60e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.20e-23,56;UBERON:0005068,1.20e-23,56;UBERON:0006241,1.20e-23,56;UBERON:0007135,1.20e-23,56;UBERON:0001016,1.59e-22,89;UBERON:0000073,3.79e-22,53;UBERON:0002616,3.79e-22,53;UBERON:0007023,3.51e-21,114;UBERON:0001017,4.69e-21,81;UBERON:0002780,1.31e-20,41;UBERON:0001890,1.31e-20,41;UBERON:0003080,1.31e-20,41;UBERON:0006240,1.31e-20,41;UBERON:0000955,7.25e-19,68;UBERON:0006238,7.25e-19,68;UBERON:0003528,1.30e-16,34;UBERON:0002020,1.30e-16,34;UBERON:0001893,2.44e-16,34;UBERON:0002791,1.98e-15,32;UBERON:0001869,3.48e-15,32;UBERON:0002346,1.23e-14,86;UBERON:0002390,1.49e-14,98;UBERON:0003061,1.49e-14,98;UBERON:0003075,3.63e-14,82;UBERON:0007284,3.63e-14,82;UBERON:0001474,6.29e-13,82;UBERON:0002371,6.64e-13,76;UBERON:0002193,2.80e-12,108;UBERON:0000956,1.67e-11,25;UBERON:0000203,1.67e-11,25;UBERON:0002619,2.55e-11,22;UBERON:0003056,5.74e-11,61;UBERON:0004765,7.20e-11,90;UBERON:0002405,9.09e-11,93;UBERON:0001434,2.90e-10,100;UBERON:0001950,3.65e-10,20;UBERON:0010314,6.24e-09,132;UBERON:0010371,2.81e-07,104 | |||
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| ||
|short_description=p1@CCDC82 | |||
}} | }} |
Latest revision as of 06:11, 25 September 2015
Short description: | p1@CCDC82 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC82_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524836, ENST00000525786, ENST00000542662, NM_024725, uc001pfx.3, uc009ywr.2, uc009ywt.1_5end |
EntrezGene: | CCDC82 |
HGNC: | 26282 |
UniProt: | Q8N4S0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.77e-24 | 136 |
hematopoietic lineage restricted progenitor cell | 7.32e-21 | 120 |
hematopoietic stem cell | 1.69e-18 | 168 |
nongranular leukocyte | 1.22e-17 | 115 |
hematopoietic oligopotent progenitor cell | 2.49e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.49e-17 | 161 |
myeloid leukocyte | 3.98e-16 | 72 |
hematopoietic cell | 6.72e-16 | 177 |
granulocyte monocyte progenitor cell | 7.48e-15 | 67 |
myeloid lineage restricted progenitor cell | 7.60e-15 | 66 |
macrophage dendritic cell progenitor | 5.90e-13 | 61 |
classical monocyte | 2.45e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.45e-12 | 42 |
monopoietic cell | 3.54e-12 | 59 |
monocyte | 3.54e-12 | 59 |
monoblast | 3.54e-12 | 59 |
promonocyte | 3.54e-12 | 59 |
defensive cell | 4.74e-12 | 48 |
phagocyte | 4.74e-12 | 48 |
myeloid cell | 1.65e-11 | 108 |
common myeloid progenitor | 1.65e-11 | 108 |