FFCP PHASE1:Hg19::chr11:7535044..7535063,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:7535044..7535063,+ to FFCP PHASE1:Hg19::chr11:7535044..7535063,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8495 | |EntrezGene=8495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9250 | |HGNC=9250 | ||
|TSSclassifier=strong | |||
|UniProt=Q8ND30 | |UniProt=Q8ND30 | ||
|association_with_transcript=43bp_to_ENST00000299492,NM_003621,uc001mfj.3_5end | |||
|cluster_id=chr11:7535044..7535063,+ | |||
|description=CAGE_peak_5_at_PPFIBP2_5end | |||
|id=chr11:7535044..7535063,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.68e-38!119;CL:0000738!7.68e-38!140;CL:0002031!7.18e-34!124;CL:0002009!1.07e-28!65;CL:0000037!2.72e-28!172;CL:0000566!2.72e-28!172;CL:0002032!2.76e-28!165;CL:0000837!2.76e-28!165;CL:0002194!6.41e-28!63;CL:0000576!6.41e-28!63;CL:0000040!6.41e-28!63;CL:0000559!6.41e-28!63;CL:0000557!3.37e-27!71;CL:0000766!2.49e-26!76;CL:0002057!7.95e-25!42;CL:0000839!2.33e-24!70;CL:0000988!2.43e-24!182;CL:0000860!6.77e-22!45;CL:0000763!7.06e-18!112;CL:0000049!7.06e-18!112;CL:0000542!7.54e-10!53;CL:0000051!7.54e-10!53;CL:0000945!9.33e-10!24;CL:0000826!9.33e-10!24;CL:0000838!2.49e-09!52;CL:0002393!1.04e-07!9;CL:0002397!1.04e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;6.19e-27;48!CL:0000473;9.13e-26;39!CL:0000234;9.13e-26;39!CL:0000860;5.08e-25;33!CL:0002057;5.08e-25;33!CL:0000766;9.68e-21;69!CL:0002087;6.03e-15;104!CL:0002393;4.16e-11;6!CL:0002397;4.16e-11;6!CL:0000738;1.59e-10;136!CL:0000236;3.59e-09;13!CL:0000763;5.08e-09;100!CL:0002619;5.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,5.54e-51,61;CL:0002194,1.63e-50,59;CL:0000576,1.63e-50,59;CL:0000040,1.63e-50,59;CL:0000559,1.63e-50,59;CL:0000557,1.44e-47,67;CL:0002087,1.73e-47,115;CL:0000473,4.11e-46,48;CL:0000234,4.11e-46,48;CL:0000766,9.42e-46,72;CL:0000738,4.56e-44,136;CL:0000839,7.34e-44,66;CL:0000860,3.62e-41,42;CL:0002057,3.62e-41,42;CL:0002031,5.73e-41,120;CL:0000037,4.08e-35,168;CL:0002032,2.24e-34,161;CL:0000837,2.24e-34,161;CL:0000988,2.03e-32,177;CL:0000763,1.14e-30,108;CL:0000049,1.14e-30,108;CL:0002393,1.65e-16,9;CL:0002397,1.65e-16,9;CL:0000134,6.70e-09,354;CL:0000236,1.84e-08,14;CL:0002320,2.00e-08,361;CL:0002619,5.45e-08,3;CL:0000219,8.81e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.39e-30;42!CL:0000049;8.02e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!9.23e-24!86;UBERON:0002371!4.62e-23!80;UBERON:0002390!5.61e-22!102;UBERON:0003061!5.61e-22!102;UBERON:0002193!2.28e-19!112;UBERON:0004765!6.65e-19!101;UBERON:0001434!6.65e-19!101;UBERON:0002405!2.12e-17!115;UBERON:0007023!1.43e-14!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.02e-40,76;UBERON:0001474,1.16e-38,82;UBERON:0002390,1.71e-38,98;UBERON:0003061,1.71e-38,98;UBERON:0002405,7.58e-36,93;UBERON:0002193,2.13e-35,108;UBERON:0004765,4.61e-34,90;UBERON:0001434,2.36e-29,100;UBERON:0002204,2.15e-13,167;UBERON:0003081,5.93e-13,203;UBERON:0002384,8.80e-08,371 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.821005894499457,0.550975469195755,1.18009283054671,2.30297638858328,1.54816123316076,0,0,0,0.387336002901508,0.426507697462265,0,1.10799081706375,1.80490002723128,1.73608696572681,3.58264758783879,3.56283032620878,6.43938919085466,0.872389432677388,2.26725566213286,1.69808842831471,1.39457422143411,2.05583944010913,4.02618282163635,0,0.512321413058201,0.47296445977717,1.72372840368309,2.5819387343353,2.70852973188684,2.25890807451126,1.91034305040492,2.9214052977861,1.22433556948361,1.60464513538047,1.91801137739712,0.659702600373432,0.997318288108159,0,2.03146467040009,2.26954089876456,2.4912889959823,0.251248665256743,1.0429658368404,2.38907729175628,1.21079900526674,3.31449872388808,1.26584954976354,1.69004229049553,1.91343869968539,2.30624510059213,0.898629049171961,0.450530678524519,2.25015821375912,1.14005097496499,1.9891667719909,2.55729815270488,1.75996244461323,1.63841583378639,0,1.28019066769952,0.800791974072025,2.29900975981793,0.661044872784862,0,3.98449078376614,5.28513470433845,10.7036503875064,0,2.80254281490768,0,0.983548850569165,0,0.822405995998037,0.334372990781356,3.58514493296949,0,0,0.334231370655521,0,0,0,0.25618263945135,0,0,0,0,5.48660283699624,1.60524496853828,0,1.81294948316106,1.14966148080576,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0,0,0,0.710331756132051,1.64225599384209,2.01606743224732,0.534880391567015,1.44824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.0478326039817,0,0.370784442784429,2.59637914923747,3.48259474598534,1.72845348674525,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,2.95460407304877,0.234004265139238,1.48631162288728,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0.857479297891735,0,0,0,0,0,0,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,3.64871341923571,7.5338563714819,0,0,0,0,0,0,0,0,0.985153801009636,0.431255149719035,0.385029108839245,0,0,0,0.335032530668698,0,0.749007023947182,0,0.414415513436035,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.82707210449155,2.37285620900479,2.13455115606889,0.303127571446259,0,0.30239029332968,0,0.306923946576125,0.561320188866147,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.412164046590889,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.192444225451024,0,0,0.564862804660675,0,0,0.443430153536676,0.229723400206959,1.52234282769651,0,0,0,0,0,1.08006287447623,0,0.427296284509893,0.962479855263359,0,1.85803175125719,0,0,0.159426272728822,0,0,0,0,0,0.456469358066384,0,2.50634477090067,0,0,0.403599414382095,0.425846237690326,0,0.307240764308458,0.671028323677248,0.500547425135725,0.390776190804081,0,0,0,0,0,0,0,0.121360521749513,0.334330152832435,0,0.23874448473769,0,0.307160702099232,0,0.844016498463076,0.667852230137435,0.16480387422676,0,1.19548792950642,2.76283915531148,0,0,2.33861130376032,0,0,0.179021174675609,0.511572370226872,0.197286811273867,0,0,0,0.556608588971108,0,0,0.174919999992391,0,0.1137934482855,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,0.461701551022782,0,0,0.538545866458633,0.217294743844016,0,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0.282706142867882,0,0,0.353830258013357,0,0,0,0,2.89824871816911,0,0.234264445725339,1.45963831372533,0,0,2.76209081994573,1.20990716048664,0.61214552326098,0.758238955541855,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.698906672968121,0,0,0,0,0.969890164884194,0.0882561266915003,0.677942222341597,0,0,0.949661939338181,0.586654148204409,0,0.640358984218058,0.19980960958213,0,0,0,0,0,0,0,0,0,0,2.40168115483916,1.77976992559591,1.27746588066972,0,0,0,0,0.717873024576814,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0,0,0.13480708770837,0.0984274815147488,0.254019996197353,0,0.953423842781029,0.160753148465019,0,0,0.2249738915515,1.5476039091159,0.607495566580247,0.335434687599266,0.709251365692784,0.419636705079985,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0.226624183040251,1.02586563574658,0,0.517131825446202,0.79339561045614,0.171086837884329,0,0.10678741256769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| 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| ||
|short_description=p5@PPFIBP2 | |||
}} | }} |
Latest revision as of 06:41, 20 September 2015
Short description: | p5@PPFIBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PPFIBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_ENST00000299492, NM_003621, uc001mfj.3_5end |
EntrezGene: | PPFIBP2 |
HGNC: | 9250 |
UniProt: | Q8ND30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 5.54e-51 | 61 |
monopoietic cell | 1.63e-50 | 59 |
monocyte | 1.63e-50 | 59 |
monoblast | 1.63e-50 | 59 |
promonocyte | 1.63e-50 | 59 |
granulocyte monocyte progenitor cell | 1.44e-47 | 67 |
nongranular leukocyte | 1.73e-47 | 115 |
defensive cell | 4.11e-46 | 48 |
phagocyte | 4.11e-46 | 48 |
myeloid leukocyte | 9.42e-46 | 72 |
leukocyte | 4.56e-44 | 136 |
myeloid lineage restricted progenitor cell | 7.34e-44 | 66 |
classical monocyte | 3.62e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.62e-41 | 42 |
hematopoietic lineage restricted progenitor cell | 5.73e-41 | 120 |
hematopoietic stem cell | 4.08e-35 | 168 |
hematopoietic oligopotent progenitor cell | 2.24e-34 | 161 |
hematopoietic multipotent progenitor cell | 2.24e-34 | 161 |
hematopoietic cell | 2.03e-32 | 177 |
myeloid cell | 1.14e-30 | 108 |
common myeloid progenitor | 1.14e-30 | 108 |
intermediate monocyte | 1.65e-16 | 9 |
CD14-positive, CD16-positive monocyte | 1.65e-16 | 9 |
mesenchymal cell | 6.70e-09 | 354 |
B cell | 1.84e-08 | 14 |
connective tissue cell | 2.00e-08 | 361 |
adult endothelial progenitor cell | 5.45e-08 | 3 |
motile cell | 8.81e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.02e-40 | 76 |
bone element | 1.16e-38 | 82 |
hematopoietic system | 1.71e-38 | 98 |
blood island | 1.71e-38 | 98 |
immune system | 7.58e-36 | 93 |
hemolymphoid system | 2.13e-35 | 108 |
skeletal element | 4.61e-34 | 90 |
skeletal system | 2.36e-29 | 100 |
musculoskeletal system | 2.15e-13 | 167 |
lateral plate mesoderm | 5.93e-13 | 203 |
connective tissue | 8.80e-08 | 371 |