FFCP PHASE1:Hg19::chr11:72492229..72492246,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:72492229..72492246,- to FFCP PHASE1:Hg19::chr11:72492229..72492246,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10809 | |EntrezGene=10809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10666 | |HGNC=10666 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_ENST00000538437_5end | |||
|cluster_id=chr11:72492229..72492246,- | |||
|description=CAGE_peak_14_at_STARD10_5end | |||
|id=chr11:72492229..72492246,- | |||
|ontology_enrichment_celltype=CL:0000223!4.08e-08!59;CL:0002076!1.88e-07!43;CL:0000066!7.43e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002252;1.10e-13;1!CL:0002563;2.66e-13;4!CL:0002251;3.30e-10;20!CL:0002076;1.43e-07;42!CL:0002253;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,1.61e-13,1;CL:0002563,2.35e-13,4;CL:0002251,3.47e-10,20;CL:0000223,6.15e-10,58;CL:0002253,1.45e-07,2;CL:0002076,2.28e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.10e-13;1!CL:0000223;2.38e-08;58 | |||
|ontology_enrichment_disease=DOID:5093!2.21e-08!4;DOID:1612!2.21e-08!4;DOID:305!1.57e-07!106;DOID:1749!1.75e-07!14;DOID:7!6.01e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.59e-50;4!DOID:1612;2.59e-50;4!DOID:299;1.44e-12;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.02e-50,4;DOID:1612,2.02e-50,4;DOID:299,1.30e-12,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.12e-15!169;UBERON:0000925!4.12e-15!169;UBERON:0006595!4.12e-15!169;UBERON:0005911!2.12e-13!82;UBERON:0001007!3.63e-12!155;UBERON:0001555!3.63e-12!155;UBERON:0007026!3.63e-12!155;UBERON:0003929!3.18e-11!54;UBERON:0000077!4.81e-09!130;UBERON:0004921!1.03e-08!129;UBERON:0004185!1.03e-08!129;UBERON:0005631!1.27e-08!14;UBERON:0000158!1.27e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.19e-20;10!UBERON:0001443;1.45e-18;11!UBERON:0001242;2.66e-13;4!UBERON:0001262;2.66e-13;4!UBERON:0004786;2.66e-13;4!UBERON:0004808;2.66e-13;4!UBERON:0001277;2.66e-13;4!UBERON:0002107;9.86e-11;19!UBERON:0006925;9.86e-11;19!UBERON:0002365;5.89e-10;31!UBERON:0002330;5.89e-10;31!UBERON:0002423;3.29e-08;25!UBERON:0000485;5.47e-08;7!UBERON:0003929;5.47e-08;7!UBERON:0001007;3.11e-07;81!UBERON:0003350;4.28e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.98e-20,10;UBERON:0001443,1.33e-18,11;UBERON:0001242,2.35e-13,4;UBERON:0001262,2.35e-13,4;UBERON:0004786,2.35e-13,4;UBERON:0004808,2.35e-13,4;UBERON:0001277,2.35e-13,4;UBERON:0003929,1.04e-10,54;UBERON:0002107,1.04e-10,19;UBERON:0006925,1.04e-10,19;UBERON:0008836,1.04e-10,19;UBERON:0002365,6.00e-10,31;UBERON:0002330,6.00e-10,31;UBERON:0008835,2.79e-09,22;UBERON:0003894,2.79e-09,22;UBERON:0009854,6.91e-09,23;UBERON:0007499,3.42e-08,25;UBERON:0009497,3.42e-08,25;UBERON:0000015,3.42e-08,25;UBERON:0002423,3.42e-08,25;UBERON:0006235,3.42e-08,25;UBERON:0004161,3.42e-08,25;UBERON:0009569,5.58e-08,112;UBERON:0009856,6.95e-08,26;UBERON:0004921,1.99e-07,118;UBERON:0002530,2.93e-07,59;UBERON:0003350,4.02e-07,8;UBERON:0005911,7.65e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.873765488520689,0.527533956456907,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0.741568885568859,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,1.26755034821831,0,2.36315962672562,0,1.35287282397425,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,4.29243081047436,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81876542867756,0,0.604780586659361,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,2.53804844142407,0.601519410909855,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.721287081534056,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.47748896947538,1.18785872333055,0,0,0,0.111308705022906,0,0,0,0,0.503865495708552,0,0,0,0.0898683511473268,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,3.38556089410803,1.39935999993913,0.724999575434793,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0.41827123283581,0.230850775511391,0,0.46112780877612,0.538545866458633,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,2.3054466744657,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0.670869375198532,0,0.157363764404994,0,0,0.575745591958336,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,1.75862680413699,1.32506888912221,0.129282956361551,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.366857197043358,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0.163771917510097,0,0.135075169236789,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0,0,0.111231401892069,0.156986185701028,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.160482733378337,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.250707539292375,1.51557396436479,0.267964130156178,0,0,0,0,0.129177819672012,0.0620747142958579,0,0.318235791390825,0.202117188958219,0.653150243690884,0,0.0673520530145875,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.873765488520689,0.527533956456907,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0.741568885568859,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,1.26755034821831,0,2.36315962672562,0,1.35287282397425,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,4.29243081047436,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81876542867756,0,0.604780586659361,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,2.53804844142407,0.601519410909855,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.721287081534056,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.47748896947538,1.18785872333055,0,0,0,0.111308705022906,0,0,0,0,0.503865495708552,0,0,0,0.0898683511473268,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,3.38556089410803,1.39935999993913,0.724999575434793,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0.41827123283581,0.230850775511391,0,0.46112780877612,0.538545866458633,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,2.3054466744657,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0.670869375198532,0,0.157363764404994,0,0,0.575745591958336,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,1.75862680413699,1.32506888912221,0.129282956361551,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.366857197043358,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0.163771917510097,0,0.135075169236789,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0,0,0.111231401892069,0.156986185701028,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.160482733378337,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.250707539292375,1.51557396436479,0.267964130156178,0,0,0,0,0.129177819672012,0.0620747142958579,0,0.318235791390825,0.202117188958219,0.653150243690884,0,0.0673520530145875,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p14@STARD10 | |||
}} | }} |
Latest revision as of 01:47, 20 September 2015
Short description: | p14@STARD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_STARD10_5end |
Coexpression cluster: | NA |
Association with transcript: | -68bp_to_ENST00000538437_5end |
EntrezGene: | STARD10 |
HGNC: | 10666 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 1.61e-13 | 1 |
intestinal epithelial cell | 2.35e-13 | 4 |
epithelial cell of alimentary canal | 3.47e-10 | 20 |
endodermal cell | 6.15e-10 | 58 |
epithelial cell of large intestine | 1.45e-07 | 2 |
endo-epithelial cell | 2.28e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
breast | 1.98e-20 | 10 |
chest | 1.33e-18 | 11 |
intestinal mucosa | 2.35e-13 | 4 |
wall of intestine | 2.35e-13 | 4 |
gastrointestinal system mucosa | 2.35e-13 | 4 |
gastrointestinal system epithelium | 2.35e-13 | 4 |
intestinal epithelium | 2.35e-13 | 4 |
gut epithelium | 1.04e-10 | 54 |
liver | 1.04e-10 | 19 |
digestive gland | 1.04e-10 | 19 |
liver bud | 1.04e-10 | 19 |
exocrine gland | 6.00e-10 | 31 |
exocrine system | 6.00e-10 | 31 |
hepatic diverticulum | 2.79e-09 | 22 |
liver primordium | 2.79e-09 | 22 |
digestive tract diverticulum | 6.91e-09 | 23 |
epithelial sac | 3.42e-08 | 25 |
epithelium of foregut-midgut junction | 3.42e-08 | 25 |
anatomical boundary | 3.42e-08 | 25 |
hepatobiliary system | 3.42e-08 | 25 |
foregut-midgut junction | 3.42e-08 | 25 |
septum transversum | 3.42e-08 | 25 |
subdivision of trunk | 5.58e-08 | 112 |
sac | 6.95e-08 | 26 |
subdivision of digestive tract | 1.99e-07 | 118 |
gland | 2.93e-07 | 59 |
epithelium of mucosa | 4.02e-07 | 8 |
endo-epithelium | 7.65e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.02e-50 | 4 |
breast cancer | 2.02e-50 | 4 |
adenocarcinoma | 1.30e-12 | 25 |