FFCP PHASE1:Hg19::chr11:66139926..66139937,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:66139926..66139937,- to FFCP PHASE1:Hg19::chr11:66139926..66139937,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3177 | |EntrezGene=3177 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11004 | |HGNC=11004 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-241bp_to_ENST00000546034_5end | |||
|cluster_id=chr11:66139926..66139937,- | |||
|description=CAGE_peak_11_at_SLC29A2_5end | |||
|id=chr11:66139926..66139937,- | |||
|ontology_enrichment_celltype=CL:0000838!2.95e-15!52;CL:0000542!8.54e-15!53;CL:0000051!8.54e-15!53;CL:0000945!3.06e-09!24;CL:0000826!3.06e-09!24 | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.13e-13;4!CL:0002222;1.13e-13;4!CL:0002224;1.13e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.13e-13,4;CL:0002222,1.13e-13,4;CL:0002224,1.13e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.40e-147;3 | |||
|ontology_enrichment_disease=DOID:0060058!4.62e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.90e-17!115;UBERON:0001049!5.48e-16!57;UBERON:0005068!5.48e-16!57;UBERON:0006241!5.48e-16!57;UBERON:0007135!5.48e-16!57;UBERON:0002616!5.52e-14!59;UBERON:0003075!2.71e-12!86;UBERON:0007284!2.71e-12!86;UBERON:0002346!3.97e-12!90;UBERON:0000955!2.82e-11!69;UBERON:0006238!2.82e-11!69;UBERON:0002780!4.36e-11!41;UBERON:0001890!4.36e-11!41;UBERON:0006240!4.36e-11!41;UBERON:0003080!1.13e-10!42;UBERON:0001017!2.50e-10!82;UBERON:0005743!2.02e-09!86;UBERON:0002020!2.48e-09!34;UBERON:0003528!2.48e-09!34;UBERON:0000073!6.33e-09!94;UBERON:0001016!6.33e-09!94;UBERON:0001893!8.28e-09!34;UBERON:0002619!1.90e-08!22;UBERON:0002791!3.52e-08!33;UBERON:0000956!3.74e-08!25;UBERON:0000203!3.74e-08!25;UBERON:0001950!6.19e-08!20;UBERON:0001869!2.07e-07!32;UBERON:0004733!2.48e-07!12;UBERON:0002028!2.48e-07!12;UBERON:0007277!2.48e-07!12;UBERON:0003056!5.11e-07!61;UBERON:0003076!7.85e-07!15;UBERON:0003057!7.85e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.31e-74;6!UBERON:0002680;6.62e-50;9!UBERON:0001895;6.62e-50;9!UBERON:0004733;9.76e-38;12!UBERON:0002028;9.76e-38;12!UBERON:0004732;6.32e-35;13!UBERON:0010077;1.13e-13;4!UBERON:0005389;1.13e-13;4!UBERON:0000484;1.13e-13;4!UBERON:0000965;1.13e-13;4!UBERON:0001803;1.13e-13;4!UBERON:0000073;8.01e-07;53!UBERON:0002616;8.01e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.31e-74,6;UBERON:0006215,3.31e-74,6;UBERON:0002680,6.62e-50,9;UBERON:0001895,6.62e-50,9;UBERON:0010092,6.62e-50,9;UBERON:0004733,9.76e-38,12;UBERON:0002028,9.76e-38,12;UBERON:0007277,9.76e-38,12;UBERON:0004732,6.32e-35,13;UBERON:0003076,2.01e-30,15;UBERON:0003057,2.01e-30,15;UBERON:0010077,1.13e-13,4;UBERON:0005389,1.13e-13,4;UBERON:0000484,1.13e-13,4;UBERON:0002546,1.13e-13,4;UBERON:0000965,1.13e-13,4;UBERON:0001803,1.13e-13,4;UBERON:0003073,1.13e-13,4;UBERON:0005426,1.13e-13,4;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0000073,3.71e-09,53;UBERON:0002616,3.71e-09,53;UBERON:0001049,1.02e-08,56;UBERON:0005068,1.02e-08,56;UBERON:0006241,1.02e-08,56;UBERON:0007135,1.02e-08,56;UBERON:0010371,2.22e-08,104;UBERON:0000076,1.69e-07,8;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68;UBERON:0010314,8.99e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.229240217243854,0.246301768349837,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0.661044872784862,0,0,0.587237189370939,0.382273228125229,0,0,0,0.590129310341499,0.393010762749165,0.205601498999509,0.334372990781356,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0,0.25618263945135,0,0.493313713811028,0.829050053357545,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0,0.111443384277478,0,0,0.296964680832639,0,0,0.422008249231538,0,0.16480387422676,0,0,0,0,0,0.246169610922139,0,0,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,0.524759999977174,0,0,0,0.236387681767936,0,0,0,0,0,1.52581736317083,3.09621927807429,1.18219047581419,0.219385397153973,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0.210998064528027,0.326465616318295,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.134802265961354,0,0.234264445725339,0.182454789215666,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0.677294319023596,0.803982487948041,0.656923656425674,0,0,0,0,0,0.189932387867636,0.195551382734803,0,0.213452994739353,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.788662062837943,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0.0846733320657845,0,0.817220436669454,0,0,0,0,0,0.0607495566580247,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0.113312091520126,0,0,0.775697738169303,0.52893040697076,0,0,0,0,0,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.500763722825999,0,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.553033744606923,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0,0,0.638535436228605,0,0.252071696221718,0.414943514785307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0.115233987555779,0,0.271878931907327,0.0657727735628491,0.118193840883968,0.111231401892069,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.121917924982269,0.647428837187895,0.205325613712494,0,0,0.467878926924211,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0.0644578879735772,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0.917458566809082,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0.26721740526556,0,0,0,0,0,0.620597975171371,0,0,0.129177819672012,0.496597714366863,0,0.0636471582781649,0,0,0.342233301085281,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.229240217243854,0.246301768349837,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0.661044872784862,0,0,0.587237189370939,0.382273228125229,0,0,0,0.590129310341499,0.393010762749165,0.205601498999509,0.334372990781356,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0,0.25618263945135,0,0.493313713811028,0.829050053357545,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0,0.111443384277478,0,0,0.296964680832639,0,0,0.422008249231538,0,0.16480387422676,0,0,0,0,0,0.246169610922139,0,0,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,0.524759999977174,0,0,0,0.236387681767936,0,0,0,0,0,1.52581736317083,3.09621927807429,1.18219047581419,0.219385397153973,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0.210998064528027,0.326465616318295,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.134802265961354,0,0.234264445725339,0.182454789215666,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0.677294319023596,0.803982487948041,0.656923656425674,0,0,0,0,0,0.189932387867636,0.195551382734803,0,0.213452994739353,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.788662062837943,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0.0846733320657845,0,0.817220436669454,0,0,0,0,0,0.0607495566580247,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0.113312091520126,0,0,0.775697738169303,0.52893040697076,0,0,0,0,0,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.500763722825999,0,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.553033744606923,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0,0,0.638535436228605,0,0.252071696221718,0.414943514785307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0.115233987555779,0,0.271878931907327,0.0657727735628491,0.118193840883968,0.111231401892069,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.121917924982269,0.647428837187895,0.205325613712494,0,0,0.467878926924211,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0.0644578879735772,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0.917458566809082,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0.26721740526556,0,0,0,0,0,0.620597975171371,0,0,0.129177819672012,0.496597714366863,0,0.0636471582781649,0,0,0.342233301085281,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p11@SLC29A2 | |||
}} | }} |
Latest revision as of 14:22, 19 September 2015
Short description: | p11@SLC29A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC29A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -241bp_to_ENST00000546034_5end |
EntrezGene: | SLC29A2 |
HGNC: | 11004 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.13e-13 | 4 |
vertebrate lens cell | 1.13e-13 | 4 |
lens epithelial cell | 1.13e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.31e-74 | 6 |
rhombic lip | 3.31e-74 | 6 |
regional part of metencephalon | 6.62e-50 | 9 |
metencephalon | 6.62e-50 | 9 |
future metencephalon | 6.62e-50 | 9 |
segmental subdivision of hindbrain | 9.76e-38 | 12 |
hindbrain | 9.76e-38 | 12 |
presumptive hindbrain | 9.76e-38 | 12 |
segmental subdivision of nervous system | 6.32e-35 | 13 |
posterior neural tube | 2.01e-30 | 15 |
chordal neural plate | 2.01e-30 | 15 |
cuboidal epithelium | 1.13e-13 | 4 |
transparent eye structure | 1.13e-13 | 4 |
simple cuboidal epithelium | 1.13e-13 | 4 |
cranial placode | 1.13e-13 | 4 |
lens of camera-type eye | 1.13e-13 | 4 |
epithelium of lens | 1.13e-13 | 4 |
lens placode | 1.13e-13 | 4 |
lens vesicle | 1.13e-13 | 4 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 5.98e-10 | 86 |
regional part of nervous system | 3.71e-09 | 53 |
regional part of brain | 3.71e-09 | 53 |
neural tube | 1.02e-08 | 56 |
neural rod | 1.02e-08 | 56 |
future spinal cord | 1.02e-08 | 56 |
neural keel | 1.02e-08 | 56 |
ecto-epithelium | 2.22e-08 | 104 |
external ectoderm | 1.69e-07 | 8 |
brain | 2.97e-07 | 68 |
future brain | 2.97e-07 | 68 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |