FFCP PHASE1:Hg19::chr11:64915056..64915059,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:64915056..64915059,+ to FFCP PHASE1:Hg19::chr11:64915056..64915059,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000410545_5end | |||
|cluster_id=chr11:64915056..64915059,+ | |||
|description=CAGE_peak_1_at_ENST00000410545_5end | |||
|id=chr11:64915056..64915059,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.71e-12!45;CL:0002057!1.11e-10!42;CL:0002009!2.80e-09!65;CL:0002194!3.88e-09!63;CL:0000576!3.88e-09!63;CL:0000040!3.88e-09!63;CL:0000559!3.88e-09!63;CL:0000557!5.70e-09!71;CL:0000839!1.75e-08!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.67e-13;33!CL:0002057;4.67e-13;33!CL:0000473;6.57e-12;39!CL:0000234;6.57e-12;39!CL:0000123;1.17e-09;2!CL:0000242;1.17e-09;2!CL:0000576;3.31e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.05e-11,48;CL:0000234,1.05e-11,48;CL:0000860,1.18e-11,42;CL:0002057,1.18e-11,42;CL:0002009,5.84e-10,61;CL:0000242,1.59e-09,2;CL:0000557,8.10e-09,67;CL:0002194,8.13e-09,59;CL:0000576,8.13e-09,59;CL:0000040,8.13e-09,59;CL:0000559,8.13e-09,59;CL:0000839,1.28e-07,66;CL:0000322,8.85e-07,3;CL:0000766,8.87e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-09;42 | |||
|ontology_enrichment_disease=DOID:162!3.87e-13!235;DOID:14566!4.20e-13!239;DOID:0050687!1.48e-08!143;DOID:305!3.50e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.17e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,8.75e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.07e-07!80;UBERON:0001474!2.30e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.17e-09;2!UBERON:0002173;1.17e-09;2!UBERON:0002186;1.17e-09;2!UBERON:0002050;5.75e-08;5!UBERON:0005423;5.75e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,8.75e-10,2;UBERON:0002173,8.75e-10,2;UBERON:0002186,8.75e-10,2;UBERON:0002405,1.03e-07,93;UBERON:0002371,1.90e-07,76;UBERON:0002193,4.10e-07,108;UBERON:0004821,8.85e-07,3;UBERON:0003215,8.85e-07,3;UBERON:0010368,8.85e-07,3;UBERON:0009911,8.85e-07,3;UBERON:0002299,8.85e-07,3;UBERON:0006524,8.85e-07,3;UBERON:0008874,8.85e-07,3;UBERON:0002169,8.85e-07,3;UBERON:0004894,8.85e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0.125542639594803,0.61130724598361,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0,0,0,1.30858414901608,0,0.970336244751265,1.16214518452842,0.822335776043652,0.619412741790207,2.8769239232215,1.2808035326455,0.47296445977717,1.37898272294647,0.645484683583826,0,0.564727018627814,0,0.224723484445085,1.53041946185451,0.641858054152187,0.639337125799041,1.31940520074686,1.19678194572979,0.426224750532694,2.32167390902867,0,0.622822248995575,1.00499466102697,1.0429658368404,0.65156653411535,0.605399502633369,0.368277635987565,1.26584954976354,0.211255286311942,0,0.209658645508376,0.44931452458598,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,1.14681968437569,0,0,0,0,0.786021525498329,0.411202997999018,0,0,0,1.94826728407911,0.222820913770347,0,0,0.270803863765016,0.128091319725675,0.520237390239513,0.493313713811028,1.10540007114339,0,0.296573126324121,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,1.72046919021225,0,0,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.368502951935304,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0,0.250237039743928,0,0.438977620880838,0.30648779579902,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0.591534000199219,0.168584690078102,0.241011029883482,0.220587945464788,0.435758888184812,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0,1.85194205030644,3.04406643575357,0,0,0,0,0,0,0,0,0,0,0,0,0.44024217006613,0.621984346622316,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0.1466765716419,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.213455115606889,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0.368323955743585,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.27470839445503,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0.0711418433484141,0.318852545457645,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0.313359791546046,0,0.338583555603207,0.1605880751037,0.605399121573143,0.851692475380653,0,0.614481528616916,0.223676107892416,0.333698283423817,0,0.835218521685727,0,0,0.33307196799782,0,0.37428108081644,0.146508179271894,0.242721043499027,0.557216921387392,1.42068073403207,0.47748896947538,0,0,0,0.562677665642051,0.111308705022906,0.329607748453519,0,0,0.828851746593443,1.0077309914171,0.102268682502155,0.246169610922139,0,0,0,1.02314474045374,0.0986434056369336,0,0,0,0,0,1.82299432759663,0.0874599999961957,0,0.1137934482855,2.03402920234213,1.65471377237555,0.689486746482929,0.874813840149763,0.694499979733169,0,0.361789315876224,0,0.774054819518572,0,0.219385397153973,0.435753854075961,0.41827123283581,0,0.113942055847001,0.23056390438806,0.269272933229316,0,0,0,0.533034776018635,0,0.31396051279005,0,0.451191321234361,0.392125068635479,0,0.189753732724185,0,1.26598838716816,0,0,0.432777279484182,0,0.0884575645033392,1.22206028986725,0.889563386041866,0.494255755786011,0.104421949505455,0,0.802577647298789,0,0.729819156862664,0,0.242780379534093,0,0,0,0,0.751617097072463,0.207376382794494,0,1.98595173525299,0.313932918407225,0,0,0.416024019039416,0,0.195984794828755,0,0,0.51595809741485,1.16107597546902,1.38869702463753,0.985385484638511,0.0969890164884194,0.0882561266915003,0,0,0.596143835108969,0,0.195551382734803,0.0801588202515337,0.640358984218058,0.39961921916426,0.144090417154106,0.343609788497747,0.171594997861965,0,0.124252535565433,0.707082103850386,0.135904206073614,0,0.305994652908965,0.288950589901519,0.600420288709789,0.273810757783986,0,0.429765441419957,0.525774708558629,1.39641200636127,0.229160424011684,0,0.399358000997982,0,0,0,0,0,0.787831823072237,0.494495150286999,0.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| 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| ||
|short_description=p1@ENST00000410545 | |||
}} | }} |
Latest revision as of 00:28, 24 July 2015
Short description: | p1@ENST00000410545 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000410545_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000410545_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.05e-11 | 48 |
phagocyte | 1.05e-11 | 48 |
classical monocyte | 1.18e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-11 | 42 |
macrophage dendritic cell progenitor | 5.84e-10 | 61 |
Merkel cell | 1.59e-09 | 2 |
granulocyte monocyte progenitor cell | 8.10e-09 | 67 |
monopoietic cell | 8.13e-09 | 59 |
monocyte | 8.13e-09 | 59 |
monoblast | 8.13e-09 | 59 |
promonocyte | 8.13e-09 | 59 |
myeloid lineage restricted progenitor cell | 1.28e-07 | 66 |
pneumocyte | 8.85e-07 | 3 |
myeloid leukocyte | 8.87e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 8.75e-10 | 2 |
alveolar duct | 8.75e-10 | 2 |
bronchiole | 8.75e-10 | 2 |
immune system | 1.03e-07 | 93 |
bone marrow | 1.90e-07 | 76 |
hemolymphoid system | 4.10e-07 | 108 |
pulmonary alveolus epithelium | 8.85e-07 | 3 |
alveolus | 8.85e-07 | 3 |
pulmonary lobule | 8.85e-07 | 3 |
lobule | 8.85e-07 | 3 |
alveolus of lung | 8.85e-07 | 3 |
alveolar system | 8.85e-07 | 3 |
pulmonary acinus | 8.85e-07 | 3 |
alveolar sac | 8.85e-07 | 3 |
alveolar wall | 8.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 8.75e-10 | 2 |