FFCP PHASE1:Hg19::chr11:64512524..64512536,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:64512524..64512536,- to FFCP PHASE1:Hg19::chr11:64512524..64512536,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10235 | |EntrezGene=10235 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9879 | |HGNC=9879 | ||
|TSSclassifier=strong | |||
|UniProt=A6NHE2 | |UniProt=A6NHE2 | ||
|association_with_transcript=-55bp_to_ENST00000377485_5end | |||
|cluster_id=chr11:64512524..64512536,- | |||
|coexpression_cluster_id=C996 | |||
|description=CAGE_peak_11_at_RASGRP2_5end | |||
|id=chr11:64512524..64512536,- | |||
|ontology_enrichment_celltype=CL:0000037!4.89e-33!172;CL:0000566!4.89e-33!172;CL:0000988!7.57e-30!182;CL:0000542!1.06e-29!53;CL:0000051!1.06e-29!53;CL:0002032!4.04e-29!165;CL:0000837!4.04e-29!165;CL:0000838!7.50e-29!52;CL:0002087!5.04e-26!119;CL:0000738!1.12e-25!140;CL:0000791!5.38e-22!18;CL:0000789!5.38e-22!18;CL:0002420!5.38e-22!18;CL:0002419!5.38e-22!18;CL:0000790!5.38e-22!18;CL:0002031!1.39e-20!124;CL:0000084!1.80e-19!25;CL:0000827!1.80e-19!25;CL:0000625!2.41e-13!11;CL:0000236!2.09e-12!14;CL:0000624!1.23e-09!6;CL:0000945!4.15e-08!24;CL:0000826!4.15e-08!24;CL:0000763!2.46e-07!112;CL:0000049!2.46e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.00e-29;18!CL:0000789;1.00e-29;18!CL:0002419;1.00e-29;18!CL:0000084;8.85e-21;25!CL:0000625;5.53e-20;11!CL:0000226;5.33e-15;3!CL:0000842;5.33e-15;3!CL:0000542;5.35e-14;53!CL:0000624;2.84e-13;6!CL:0000236;1.07e-08;13!CL:0000623;9.10e-08;3!CL:0002087;6.24e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.17e-30,18;CL:0000789,6.17e-30,18;CL:0002420,6.17e-30,18;CL:0002419,6.17e-30,18;CL:0000790,6.17e-30,18;CL:0000838,1.98e-25,52;CL:0000542,7.18e-25,53;CL:0000051,7.18e-25,53;CL:0000084,6.28e-21,25;CL:0000827,6.28e-21,25;CL:0000625,3.98e-20,11;CL:0000226,3.24e-15,3;CL:0000842,3.24e-15,3;CL:0002087,1.07e-14,115;CL:0000738,2.07e-14,136;CL:0000037,2.18e-14,168;CL:0000988,2.36e-13,177;CL:0000624,2.36e-13,6;CL:0002032,3.13e-10,161;CL:0000837,3.13e-10,161;CL:0002031,9.16e-10,120;CL:0000236,4.96e-08,14;CL:0000623,9.13e-08,3;CL:0000825,9.13e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.00e-29;18!CL:0000051;5.35e-14;53 | |||
|ontology_enrichment_disease=DOID:1240!6.46e-09!39;DOID:2531!9.57e-09!51;DOID:0060083!9.57e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.71e-09!15;UBERON:0000179!2.71e-09!15;UBERON:0000463!2.71e-09!15;UBERON:0002390!6.27e-09!102;UBERON:0003061!6.27e-09!102;UBERON:0002193!6.91e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.93e-24;15!UBERON:0000179;2.93e-24;15!UBERON:0000463;2.93e-24;15!UBERON:0002390;5.38e-15;32!UBERON:0002193;7.96e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.99e-24,15;UBERON:0000179,2.99e-24,15;UBERON:0000463,2.99e-24,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.619264493264304,0,0,0,0.232401601740905,0.142169232487422,1.46800219667424,0.553995408531877,1.40381113229099,0.868043482863407,0,0.971680998056939,0,0,0,0.242584061187816,0.464858073811369,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0.545812300115692,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0.209658645508376,0.22465726229299,0,0,0.570025487482497,0.19891667719909,0,1.75996244461323,1.63841583378639,0,0.853460445133014,0.400395987036012,0,2.64417949113945,0.954053754535364,1.1384259382189,1.17447437874188,0.382273228125229,0,1.12101712596307,0.263384084775077,2.75393678159366,3.14408610199332,3.08402248499264,0.501559486172034,1.62961133316795,1.4203434172042,1.94826728407911,0.445641827540694,0.883817722424512,0.886135578334485,0.541607727530031,0.384273959177026,0.260118695119756,0.164437904603676,1.38175008892924,0.289803085735052,1.77943875794473,2.1403266247177,3.1360657141493,0.793165398882963,0.383220493601921,1.37450978193052,0.759059076058509,0.95569624297229,1.95325036156926,0,0.903450714466637,1.15187950038977,1.24930726552346,1.89421801635213,0.821127996921047,1.81446068902259,2.13952156626806,5.50332734754636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.985153801009636,4.31255149719035,4.10697716095195,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,2.80428461064202,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,2.27858874869665,2.85878130549347,2.05681136543097,0,0.540031437238115,1.58625035258854,0,0,0,0.185803175125719,0.144269212976445,0.355709216742071,0.159426272728822,0.798317485731266,0.957526850661834,0.423347165447766,0,0.280797178113459,2.51058146936511,0,0,0.50787533340481,0.321176150207399,0,0,0.343505344755765,0,0,0.333698283423817,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.498635045700469,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,5.10986352267889,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0.563903507879121,0.128915775947154,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0.129177819672012,0.558672428662721,0,0,0.404234377916439,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.619264493264304,0,0,0,0.232401601740905,0.142169232487422,1.46800219667424,0.553995408531877,1.40381113229099,0.868043482863407,0,0.971680998056939,0,0,0,0.242584061187816,0.464858073811369,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0.545812300115692,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0.209658645508376,0.22465726229299,0,0,0.570025487482497,0.19891667719909,0,1.75996244461323,1.63841583378639,0,0.853460445133014,0.400395987036012,0,2.64417949113945,0.954053754535364,1.1384259382189,1.17447437874188,0.382273228125229,0,1.12101712596307,0.263384084775077,2.75393678159366,3.14408610199332,3.08402248499264,0.501559486172034,1.62961133316795,1.4203434172042,1.94826728407911,0.445641827540694,0.883817722424512,0.886135578334485,0.541607727530031,0.384273959177026,0.260118695119756,0.164437904603676,1.38175008892924,0.289803085735052,1.77943875794473,2.1403266247177,3.1360657141493,0.793165398882963,0.383220493601921,1.37450978193052,0.759059076058509,0.95569624297229,1.95325036156926,0,0.903450714466637,1.15187950038977,1.24930726552346,1.89421801635213,0.821127996921047,1.81446068902259,2.13952156626806,5.50332734754636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.985153801009636,4.31255149719035,4.10697716095195,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,2.80428461064202,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,2.27858874869665,2.85878130549347,2.05681136543097,0,0.540031437238115,1.58625035258854,0,0,0,0.185803175125719,0.144269212976445,0.355709216742071,0.159426272728822,0.798317485731266,0.957526850661834,0.423347165447766,0,0.280797178113459,2.51058146936511,0,0,0.50787533340481,0.321176150207399,0,0,0.343505344755765,0,0,0.333698283423817,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.498635045700469,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,5.10986352267889,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0.563903507879121,0.128915775947154,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0.129177819672012,0.558672428662721,0,0,0.404234377916439,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,1.00636896795513,0 | ||
|short_description=p11@RASGRP2 | |||
}} | }} |
Latest revision as of 04:13, 19 September 2015
Short description: | p11@RASGRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RASGRP2_5end |
Coexpression cluster: | C996_CD4_CD8_Natural_CD19_Whole_blood_Peripheral |
Association with transcript: | -55bp_to_ENST00000377485_5end |
EntrezGene: | RASGRP2 |
HGNC: | 9879 |
UniProt: | A6NHE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.17e-30 | 18 |
alpha-beta T cell | 6.17e-30 | 18 |
immature T cell | 6.17e-30 | 18 |
mature T cell | 6.17e-30 | 18 |
immature alpha-beta T cell | 6.17e-30 | 18 |
lymphoid lineage restricted progenitor cell | 1.98e-25 | 52 |
lymphocyte | 7.18e-25 | 53 |
common lymphoid progenitor | 7.18e-25 | 53 |
T cell | 6.28e-21 | 25 |
pro-T cell | 6.28e-21 | 25 |
CD8-positive, alpha-beta T cell | 3.98e-20 | 11 |
single nucleate cell | 3.24e-15 | 3 |
mononuclear cell | 3.24e-15 | 3 |
nongranular leukocyte | 1.07e-14 | 115 |
leukocyte | 2.07e-14 | 136 |
hematopoietic stem cell | 2.18e-14 | 168 |
hematopoietic cell | 2.36e-13 | 177 |
CD4-positive, alpha-beta T cell | 2.36e-13 | 6 |
hematopoietic oligopotent progenitor cell | 3.13e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.13e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 9.16e-10 | 120 |
B cell | 4.96e-08 | 14 |
natural killer cell | 9.13e-08 | 3 |
pro-NK cell | 9.13e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.99e-24 | 15 |
haemolymphatic fluid | 2.99e-24 | 15 |
organism substance | 2.99e-24 | 15 |