FFCP PHASE1:Hg19::chr11:6435039..6435047,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:6435039..6435047,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_at_chr11:6435039..6435047,- | |||
|id=chr11:6435039..6435047,- | |||
|ontology_enrichment_celltype=CL:0000791!6.32e-23!18;CL:0000789!6.32e-23!18;CL:0002420!6.32e-23!18;CL:0002419!6.32e-23!18;CL:0000790!6.32e-23!18;CL:0000084!2.50e-15!25;CL:0000827!2.50e-15!25;CL:0000625!4.72e-14!11;CL:0000624!2.14e-12!6;CL:0000838!3.63e-08!52;CL:0000542!6.27e-08!53;CL:0000051!6.27e-08!53;CL:0000842!4.75e-07!3;CL:0000898!6.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.11e-26;18!CL:0000789;3.11e-26;18!CL:0002419;3.11e-26;18!CL:0000084;1.01e-18;25!CL:0000624;1.58e-15;6!CL:0000625;1.25e-14;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.83e-26,18;CL:0000789,2.83e-26,18;CL:0002420,2.83e-26,18;CL:0002419,2.83e-26,18;CL:0000790,2.83e-26,18;CL:0000084,9.40e-19,25;CL:0000827,9.40e-19,25;CL:0000624,1.30e-15,6;CL:0000625,1.32e-14,11;CL:0000838,1.14e-08,52;CL:0000542,1.71e-08,53;CL:0000051,1.71e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;3.11e-26;18!UBERON:0005425;1.69e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-39!115;UBERON:0001049!2.32e-32!57;UBERON:0005068!2.32e-32!57;UBERON:0006241!2.32e-32!57;UBERON:0007135!2.32e-32!57;UBERON:0002616!1.26e-26!59;UBERON:0002780!1.39e-24!41;UBERON:0001890!1.39e-24!41;UBERON:0006240!1.39e-24!41;UBERON:0000955!1.46e-24!69;UBERON:0006238!1.46e-24!69;UBERON:0003080!7.81e-24!42;UBERON:0001017!2.63e-22!82;UBERON:0005743!3.87e-22!86;UBERON:0001893!7.10e-21!34;UBERON:0002020!7.86e-21!34;UBERON:0003528!7.86e-21!34;UBERON:0000073!1.50e-20!94;UBERON:0001016!1.50e-20!94;UBERON:0003075!2.02e-19!86;UBERON:0007284!2.02e-19!86;UBERON:0002791!2.05e-19!33;UBERON:0002346!4.00e-18!90;UBERON:0001869!7.41e-18!32;UBERON:0000153!5.28e-17!129;UBERON:0007811!5.28e-17!129;UBERON:0002619!5.68e-17!22;UBERON:0001950!1.83e-16!20;UBERON:0003056!1.46e-15!61;UBERON:0000956!1.54e-14!25;UBERON:0000203!1.54e-14!25;UBERON:0000033!3.06e-14!123;UBERON:0004121!2.19e-10!169;UBERON:0000178!4.14e-10!15;UBERON:0000179!4.14e-10!15;UBERON:0000463!4.14e-10!15;UBERON:0000924!6.62e-10!173;UBERON:0006601!6.62e-10!173;UBERON:0003076!1.40e-09!15;UBERON:0003057!1.40e-09!15;UBERON:0002298!6.15e-09!8;UBERON:0000200!6.27e-09!6;UBERON:0004732!6.74e-09!13;UBERON:0002308!7.25e-08!9;UBERON:0000125!7.25e-08!9;UBERON:0004733!2.66e-07!12;UBERON:0002028!2.66e-07!12;UBERON:0007277!2.66e-07!12;UBERON:0006331!3.20e-07!3;UBERON:0002771!5.27e-07!3;UBERON:0001872!8.63e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.69e-11;1!UBERON:0001785;1.69e-11;1!UBERON:0002464;1.69e-11;1!UBERON:0004904;1.69e-11;1!UBERON:0001021;1.69e-11;1!UBERON:0002581;3.63e-11;1!UBERON:0002038;3.63e-11;1!UBERON:0009661;3.63e-11;1!UBERON:0002950;3.63e-11;1!UBERON:0001891;3.63e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.45e-11,1;UBERON:0001785,1.45e-11,1;UBERON:0002464,1.45e-11,1;UBERON:0004904,1.45e-11,1;UBERON:0001021,1.45e-11,1;UBERON:0003902,1.45e-11,1;UBERON:0005425,1.45e-11,1;UBERON:0002038,2.96e-11,1;UBERON:0009661,2.96e-11,1;UBERON:0002950,2.96e-11,1;UBERON:0001891,2.96e-11,1;UBERON:0009616,2.96e-11,1;UBERON:0010286,2.96e-11,1;UBERON:0002581,5.43e-11,1 | |||
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| ||
|short_description=p@chr11:6435039..6435047,- | |||
}} | }} |
Latest revision as of 00:15, 24 July 2015
Short description: | p@chr11:6435039..6435047, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:6435039..6435047, - |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.83e-26 | 18 |
alpha-beta T cell | 2.83e-26 | 18 |
immature T cell | 2.83e-26 | 18 |
mature T cell | 2.83e-26 | 18 |
immature alpha-beta T cell | 2.83e-26 | 18 |
T cell | 9.40e-19 | 25 |
pro-T cell | 9.40e-19 | 25 |
CD4-positive, alpha-beta T cell | 1.30e-15 | 6 |
CD8-positive, alpha-beta T cell | 1.32e-14 | 11 |
lymphoid lineage restricted progenitor cell | 1.14e-08 | 52 |
lymphocyte | 1.71e-08 | 53 |
common lymphoid progenitor | 1.71e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.45e-11 | 1 |
cranial nerve | 1.45e-11 | 1 |
nerve trunk | 1.45e-11 | 1 |
nerve connecting eye with brain | 1.45e-11 | 1 |
nerve | 1.45e-11 | 1 |
retinal neural layer | 1.45e-11 | 1 |
presumptive neural retina | 1.45e-11 | 1 |
substantia nigra | 2.96e-11 | 1 |
midbrain nucleus | 2.96e-11 | 1 |
regional part of midbrain | 2.96e-11 | 1 |
midbrain | 2.96e-11 | 1 |
presumptive midbrain | 2.96e-11 | 1 |
midbrain neural tube | 2.96e-11 | 1 |
postcentral gyrus | 5.43e-11 | 1 |