FFCP PHASE1:Hg19::chr11:62495997..62496008,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:62495997..62496008,+ to FFCP PHASE1:Hg19::chr11:62495997..62496008,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283237 | |EntrezGene=283237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28432 | |HGNC=28432 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N5M4 | |UniProt=Q8N5M4 | ||
|association_with_transcript=-2bp_to_ENST00000316461_5end | |||
|cluster_id=chr11:62495997..62496008,+ | |||
|description=CAGE_peak_4_at_TTC9C_5end | |||
|id=chr11:62495997..62496008,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.46e-22!180;CL:0000548!1.02e-11!679;CL:0000004!1.02e-11!679;CL:0000255!1.02e-11!679;CL:0000012!4.34e-11!682;CL:0000192!4.81e-10!42;CL:0000514!4.81e-10!42;CL:0000183!7.90e-10!59;CL:0000144!1.15e-09!625;CL:0000680!2.04e-09!57;CL:0000056!2.04e-09!57;CL:0000355!2.04e-09!57;CL:0000220!3.20e-09!246;CL:0000393!3.28e-09!60;CL:0000211!3.28e-09!60;CL:0000057!3.54e-09!75;CL:0002321!3.92e-09!248;CL:0000222!3.94e-09!119;CL:0000187!7.48e-09!54;CL:0000359!1.46e-08!32;CL:0002371!2.81e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.69e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.20e-09,76;CL:0000393,1.49e-09,61;CL:0000211,1.49e-09,61;CL:0000192,1.86e-09,43;CL:0000514,1.86e-09,43;CL:0000680,3.45e-09,58;CL:0000056,3.45e-09,58;CL:0000355,3.45e-09,58;CL:0000222,5.15e-09,121;CL:0000359,6.64e-09,32;CL:0000187,7.49e-09,55;CL:0002321,1.36e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!5.51e-10!42;UBERON:0003509!5.51e-10!42;UBERON:0004572!5.51e-10!42;UBERON:0004573!8.78e-09!33;UBERON:0004571!8.78e-09!33;UBERON:0004290!1.16e-08!70;UBERON:0002049!2.13e-08!79;UBERON:0007798!2.13e-08!79;UBERON:0000486!2.14e-08!82;UBERON:0001134!4.58e-08!61;UBERON:0002036!4.58e-08!61;UBERON:0003082!4.58e-08!61;UBERON:0001981!5.91e-08!60;UBERON:0007500!5.91e-08!60;UBERON:0004537!5.91e-08!60;UBERON:0006965!5.91e-08!60;UBERON:0000914!1.55e-07!83;UBERON:0002329!1.55e-07!83;UBERON:0003077!1.55e-07!83;UBERON:0003059!1.55e-07!83;UBERON:0007282!1.55e-07!83;UBERON:0009618!1.55e-07!83;UBERON:0007285!1.55e-07!83;UBERON:0002385!1.66e-07!63;UBERON:0001015!1.66e-07!63;UBERON:0000383!1.66e-07!63;UBERON:0000055!2.52e-07!69;UBERON:0000947!3.37e-07!21;UBERON:0010191!3.37e-07!21;UBERON:0004872!7.69e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.61e-09;33!UBERON:0004571;8.61e-09;33!UBERON:0001637;4.24e-08;42!UBERON:0003509;4.24e-08;42!UBERON:0004572;4.24e-08;42!UBERON:0000947;7.48e-08;21!UBERON:0010191;7.48e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.99e-10,42;UBERON:0003509,1.99e-10,42;UBERON:0004572,1.99e-10,42;UBERON:0002329,4.54e-09,71;UBERON:0003059,4.54e-09,71;UBERON:0007282,4.54e-09,71;UBERON:0004290,4.54e-09,71;UBERON:0009618,4.54e-09,71;UBERON:0007524,5.30e-09,73;UBERON:0004573,7.55e-09,33;UBERON:0004571,7.55e-09,33;UBERON:0007503,8.90e-09,78;UBERON:0000486,9.04e-09,83;UBERON:0003077,1.05e-08,72;UBERON:0007285,1.05e-08,72;UBERON:0002049,1.50e-08,78;UBERON:0007798,1.50e-08,78;UBERON:0001134,2.11e-08,62;UBERON:0002036,2.11e-08,62;UBERON:0003082,2.11e-08,62;UBERON:0007500,5.93e-08,59;UBERON:0001981,5.93e-08,59;UBERON:0004537,5.93e-08,59;UBERON:0006965,5.93e-08,59;UBERON:0002385,1.15e-07,64;UBERON:0001015,1.15e-07,64;UBERON:0000383,1.15e-07,64;UBERON:0000490,1.32e-07,148;UBERON:0000055,1.77e-07,68;UBERON:0000947,2.52e-07,21;UBERON:0010191,2.52e-07,21;UBERON:0005256,7.87e-07,122 | |||
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| ||
|short_description=p4@TTC9C | |||
}} | }} |
Latest revision as of 21:18, 18 September 2015
Short description: | p4@TTC9C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TTC9C_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000316461_5end |
EntrezGene: | TTC9C |
HGNC: | 28432 |
UniProt: | Q8N5M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.20e-09 | 76 |
electrically responsive cell | 1.49e-09 | 61 |
electrically active cell | 1.49e-09 | 61 |
smooth muscle cell | 1.86e-09 | 43 |
smooth muscle myoblast | 1.86e-09 | 43 |
muscle precursor cell | 3.45e-09 | 58 |
myoblast | 3.45e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.45e-09 | 58 |
mesodermal cell | 5.15e-09 | 121 |
vascular associated smooth muscle cell | 6.64e-09 | 32 |
muscle cell | 7.49e-09 | 55 |
embryonic cell | 1.36e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
artery | 1.99e-10 | 42 |
arterial blood vessel | 1.99e-10 | 42 |
arterial system | 1.99e-10 | 42 |
somite | 4.54e-09 | 71 |
presomitic mesoderm | 4.54e-09 | 71 |
presumptive segmental plate | 4.54e-09 | 71 |
dermomyotome | 4.54e-09 | 71 |
trunk paraxial mesoderm | 4.54e-09 | 71 |
dense mesenchyme tissue | 5.30e-09 | 73 |
systemic artery | 7.55e-09 | 33 |
systemic arterial system | 7.55e-09 | 33 |
epithelial vesicle | 8.90e-09 | 78 |
multilaminar epithelium | 9.04e-09 | 83 |
paraxial mesoderm | 1.05e-08 | 72 |
presumptive paraxial mesoderm | 1.05e-08 | 72 |
vasculature | 1.50e-08 | 78 |
vascular system | 1.50e-08 | 78 |
skeletal muscle tissue | 2.11e-08 | 62 |
striated muscle tissue | 2.11e-08 | 62 |
myotome | 2.11e-08 | 62 |
epithelial tube open at both ends | 5.93e-08 | 59 |
blood vessel | 5.93e-08 | 59 |
blood vasculature | 5.93e-08 | 59 |
vascular cord | 5.93e-08 | 59 |
muscle tissue | 1.15e-07 | 64 |
musculature | 1.15e-07 | 64 |
musculature of body | 1.15e-07 | 64 |
unilaminar epithelium | 1.32e-07 | 148 |
vessel | 1.77e-07 | 68 |
aorta | 2.52e-07 | 21 |
aortic system | 2.52e-07 | 21 |
trunk mesenchyme | 7.87e-07 | 122 |