FFCP PHASE1:Hg19::chr11:61062737..61062756,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:61062737..61062756,- to FFCP PHASE1:Hg19::chr11:61062737..61062756,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=220001 | |EntrezGene=220001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26487 | |HGNC=26487 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DN2 | |UniProt=Q96DN2 | ||
|association_with_transcript=31bp_to_NM_152718,uc001nra.2,uc001nrb.2_5end | |||
|cluster_id=chr11:61062737..61062756,- | |||
|description=CAGE_peak_3_at_VWCE_5end | |||
|id=chr11:61062737..61062756,- | |||
|ontology_enrichment_celltype=CL:0000115!8.21e-13!35;CL:0002139!6.04e-12!24;CL:0002078!1.50e-11!44;CL:0000213!2.64e-08!57;CL:0000215!2.64e-08!57;CL:0002321!2.04e-07!248;CL:0000222!2.58e-07!119;CL:0000071!3.14e-07!18;CL:0002546!3.14e-07!18;CL:0005020!6.23e-07!6;CL:0002138!6.23e-07!6;CL:0005022!6.23e-07!6;CL:0000220!9.19e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.91e-12;12!CL:0000540;8.12e-07;6!CL:0000404;8.12e-07;6!CL:0002541;9.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.33e-12,12;CL:0000115,2.20e-07,36;CL:0002078,5.84e-07,45;CL:0000540,7.75e-07,6;CL:0000031,7.75e-07,6;CL:0000404,7.75e-07,6;CL:0002541,9.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.20e-10;11!UBERON:0009497;3.34e-08;13!CL:0000031;8.12e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.79e-07!118;UBERON:0001986!3.14e-07!18;UBERON:0004638!3.14e-07!18;UBERON:0004852!3.14e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.01e-13;19!UBERON:0006925;6.01e-13;19!UBERON:0002423;1.62e-09;25!UBERON:0002365;3.66e-07;31!UBERON:0002330;3.66e-07;31!UBERON:0003124;9.59e-07;3!UBERON:0000920;9.59e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.67e-13,19;UBERON:0006925,4.67e-13,19;UBERON:0008836,4.67e-13,19;UBERON:0008835,4.32e-11,22;UBERON:0003894,4.32e-11,22;UBERON:0009854,1.50e-10,23;UBERON:0007499,1.35e-09,25;UBERON:0009497,1.35e-09,25;UBERON:0000015,1.35e-09,25;UBERON:0002423,1.35e-09,25;UBERON:0006235,1.35e-09,25;UBERON:0004161,1.35e-09,25;UBERON:0009856,3.55e-09,26;UBERON:0005172,1.67e-08,54;UBERON:0005173,1.67e-08,54;UBERON:0002365,1.76e-07,31;UBERON:0002330,1.76e-07,31;UBERON:0002417,2.07e-07,60;UBERON:0000916,2.07e-07,60;UBERON:0003929,3.63e-07,54;UBERON:0000920,9.50e-07,3 | |||
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| ||
|short_description=p3@VWCE | |||
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Latest revision as of 15:22, 18 September 2015
Short description: | p3@VWCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VWCE_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_NM_152718, uc001nra.2, uc001nrb.2_5end |
EntrezGene: | VWCE |
HGNC: | 26487 |
UniProt: | Q96DN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.33e-12 | 12 |
endothelial cell | 2.20e-07 | 36 |
meso-epithelial cell | 5.84e-07 | 45 |
neuron | 7.75e-07 | 6 |
neuroblast | 7.75e-07 | 6 |
electrically signaling cell | 7.75e-07 | 6 |
chorionic membrane mesenchymal stem cell | 9.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 4.67e-13 | 19 |
digestive gland | 4.67e-13 | 19 |
liver bud | 4.67e-13 | 19 |
hepatic diverticulum | 4.32e-11 | 22 |
liver primordium | 4.32e-11 | 22 |
digestive tract diverticulum | 1.50e-10 | 23 |
epithelial sac | 1.35e-09 | 25 |
epithelium of foregut-midgut junction | 1.35e-09 | 25 |
anatomical boundary | 1.35e-09 | 25 |
hepatobiliary system | 1.35e-09 | 25 |
foregut-midgut junction | 1.35e-09 | 25 |
septum transversum | 1.35e-09 | 25 |
sac | 3.55e-09 | 26 |
abdomen element | 1.67e-08 | 54 |
abdominal segment element | 1.67e-08 | 54 |
exocrine gland | 1.76e-07 | 31 |
exocrine system | 1.76e-07 | 31 |
abdominal segment of trunk | 2.07e-07 | 60 |
abdomen | 2.07e-07 | 60 |
gut epithelium | 3.63e-07 | 54 |
egg chorion | 9.50e-07 | 3 |