FFCP PHASE1:Hg19::chr11:60883761..60883778,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:60883761..60883778,+ | |||
|coexpression_cluster_id=C588 | |||
|description=CAGE_peak_at_chr11:60883761..60883778,+ | |||
|id=chr11:60883761..60883778,+ | |||
|ontology_enrichment_celltype=CL:0000084!6.41e-33!25;CL:0000827!6.41e-33!25;CL:0000791!1.58e-28!18;CL:0000789!1.58e-28!18;CL:0002420!1.58e-28!18;CL:0002419!1.58e-28!18;CL:0000790!1.58e-28!18;CL:0000542!1.48e-22!53;CL:0000051!1.48e-22!53;CL:0000838!5.38e-21!52;CL:0000624!7.94e-18!6;CL:0002087!8.60e-17!119;CL:0000738!2.88e-16!140;CL:0000625!2.70e-15!11;CL:0000037!1.49e-11!172;CL:0000566!1.49e-11!172;CL:0002031!2.92e-11!124;CL:0000988!1.95e-10!182;CL:0000623!7.10e-10!3;CL:0000825!7.10e-10!3;CL:0002032!1.08e-09!165;CL:0000837!1.08e-09!165;CL:0000842!2.29e-09!3;CL:0000898!2.71e-09!3;CL:0000224!4.17e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.46e-29;25!CL:0000791;2.71e-29;18!CL:0000789;2.71e-29;18!CL:0002419;2.71e-29;18!CL:0000624;1.93e-23;6!CL:0000623;1.69e-17;3!CL:0000625;1.69e-12;11!CL:0000542;9.94e-11;53!CL:0000226;2.95e-08;3!CL:0000842;2.95e-08;3!CL:0000898;4.39e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.13e-29,25;CL:0000827,1.13e-29,25;CL:0000791,2.41e-29,18;CL:0000789,2.41e-29,18;CL:0002420,2.41e-29,18;CL:0002419,2.41e-29,18;CL:0000790,2.41e-29,18;CL:0000624,1.84e-23,6;CL:0000838,7.21e-21,52;CL:0000542,2.06e-20,53;CL:0000051,2.06e-20,53;CL:0000623,1.69e-17,3;CL:0000825,1.69e-17,3;CL:0002087,1.27e-14,115;CL:0000625,1.57e-12,11;CL:0000738,1.02e-11,136;CL:0002031,7.54e-11,120;CL:0000037,1.08e-08,168;CL:0000226,2.95e-08,3;CL:0000842,2.95e-08,3;CL:0000898,4.08e-08,3;CL:0000988,4.86e-08,177;CL:0002032,3.76e-07,161;CL:0000837,3.76e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.71e-29;18!CL:0000051;9.94e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.84e-17!15;UBERON:0000179!8.84e-17!15;UBERON:0000463!8.84e-17!15;UBERON:0004177!3.27e-09!7;UBERON:0002390!4.01e-07!102;UBERON:0003061!4.01e-07!102;UBERON:0002193!8.39e-07!112;UBERON:0002370!9.23e-07!4;UBERON:0005058!9.23e-07!4;UBERON:0009113!9.23e-07!4;UBERON:0003295!9.23e-07!4;UBERON:0005562!9.23e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.06e-08;15!UBERON:0000179;1.06e-08;15!UBERON:0000463;1.06e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.09e-09,15;UBERON:0000179,9.09e-09,15;UBERON:0000463,9.09e-09,15 | |||
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| ||
|short_description=p@chr11:60883761..60883778,+ | |||
}} | }} |
Latest revision as of 23:21, 23 July 2015
Short description: | p@chr11:60883761..60883778, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60883761..60883778, + |
Coexpression cluster: | C588_CD4_neuroectodermal_thymus_CD8_neuroepithelioma_Hodgkin_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.13e-29 | 25 |
pro-T cell | 1.13e-29 | 25 |
mature alpha-beta T cell | 2.41e-29 | 18 |
alpha-beta T cell | 2.41e-29 | 18 |
immature T cell | 2.41e-29 | 18 |
mature T cell | 2.41e-29 | 18 |
immature alpha-beta T cell | 2.41e-29 | 18 |
CD4-positive, alpha-beta T cell | 1.84e-23 | 6 |
lymphoid lineage restricted progenitor cell | 7.21e-21 | 52 |
lymphocyte | 2.06e-20 | 53 |
common lymphoid progenitor | 2.06e-20 | 53 |
natural killer cell | 1.69e-17 | 3 |
pro-NK cell | 1.69e-17 | 3 |
nongranular leukocyte | 1.27e-14 | 115 |
CD8-positive, alpha-beta T cell | 1.57e-12 | 11 |
leukocyte | 1.02e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 7.54e-11 | 120 |
hematopoietic stem cell | 1.08e-08 | 168 |
single nucleate cell | 2.95e-08 | 3 |
mononuclear cell | 2.95e-08 | 3 |
naive T cell | 4.08e-08 | 3 |
hematopoietic cell | 4.86e-08 | 177 |
hematopoietic oligopotent progenitor cell | 3.76e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.76e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 9.09e-09 | 15 |
haemolymphatic fluid | 9.09e-09 | 15 |
organism substance | 9.09e-09 | 15 |