FFCP PHASE1:Hg19::chr11:59950622..59950634,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:59950622..59950634,- to FFCP PHASE1:Hg19::chr11:59950622..59950634,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64231 | |EntrezGene=64231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13375 | |HGNC=13375 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000526677_5end | |||
|cluster_id=chr11:59950622..59950634,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_3_at_MS4A6A_5end | |||
|id=chr11:59950622..59950634,- | |||
|ontology_enrichment_celltype=CL:0002194!3.02e-45!63;CL:0000576!3.02e-45!63;CL:0000040!3.02e-45!63;CL:0000559!3.02e-45!63;CL:0002009!6.31e-45!65;CL:0000557!1.18e-40!71;CL:0000766!2.65e-40!76;CL:0000839!6.13e-40!70;CL:0002057!1.49e-38!42;CL:0000860!7.05e-35!45;CL:0000763!2.61e-31!112;CL:0000049!2.61e-31!112;CL:0002087!7.24e-26!119;CL:0000738!3.77e-25!140;CL:0000037!6.58e-24!172;CL:0000566!6.58e-24!172;CL:0002031!2.80e-22!124;CL:0000988!4.32e-21!182;CL:0002032!2.08e-20!165;CL:0000837!2.08e-20!165;CL:0002393!5.73e-09!9;CL:0002397!5.73e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.83e-39;33!CL:0002057;3.83e-39;33!CL:0000473;2.71e-38;39!CL:0000234;2.71e-38;39!CL:0000576;8.36e-38;48!CL:0000766;5.09e-24;69!CL:0000763;3.71e-15;100!CL:0002393;1.86e-10;6!CL:0002397;1.86e-10;6!CL:0002087;2.28e-09;104!CL:0000235;4.05e-08;6!CL:0000738;1.32e-07;136!CL:0002619;6.53e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.85e-63,59;CL:0000576,2.85e-63,59;CL:0000040,2.85e-63,59;CL:0000559,2.85e-63,59;CL:0002009,5.60e-63,61;CL:0000766,7.10e-56,72;CL:0000557,7.72e-56,67;CL:0000473,3.21e-55,48;CL:0000234,3.21e-55,48;CL:0000839,8.18e-55,66;CL:0000860,2.87e-48,42;CL:0002057,2.87e-48,42;CL:0000763,1.21e-42,108;CL:0000049,1.21e-42,108;CL:0002087,2.26e-31,115;CL:0000738,2.97e-31,136;CL:0000037,2.15e-28,168;CL:0002031,2.47e-26,120;CL:0000988,6.45e-26,177;CL:0002032,1.63e-24,161;CL:0000837,1.63e-24,161;CL:0000235,3.80e-08,6;CL:0002619,6.57e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.12e-34;42!CL:0000049;4.66e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-45!115;UBERON:0002390!1.36e-42!102;UBERON:0003061!1.36e-42!102;UBERON:0002193!2.89e-39!112;UBERON:0002371!5.53e-35!80;UBERON:0001474!4.87e-31!86;UBERON:0002405!1.75e-27!115;UBERON:0004765!3.49e-24!101;UBERON:0001434!3.49e-24!101;UBERON:0003081!4.14e-14!216;UBERON:0002204!7.70e-10!167;UBERON:0001049!2.52e-09!57;UBERON:0005068!2.52e-09!57;UBERON:0006241!2.52e-09!57;UBERON:0007135!2.52e-09!57;UBERON:0000062!9.00e-09!511;UBERON:0003080!4.37e-08!42;UBERON:0002780!1.45e-07!41;UBERON:0001890!1.45e-07!41;UBERON:0006240!1.45e-07!41;UBERON:0000479!1.95e-07!787;UBERON:0002616!3.15e-07!59;UBERON:0000178!5.27e-07!15;UBERON:0000179!5.27e-07!15;UBERON:0000463!5.27e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.61e-07;15!UBERON:0000179;3.61e-07;15!UBERON:0000463;3.61e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.79e-54,98;UBERON:0003061,2.79e-54,98;UBERON:0002193,4.30e-51,108;UBERON:0002371,3.06e-47,76;UBERON:0002405,2.43e-44,93;UBERON:0001474,1.47e-42,82;UBERON:0004765,2.70e-37,90;UBERON:0001434,6.46e-32,100;UBERON:0003081,4.80e-24,203;UBERON:0007023,2.66e-18,114;UBERON:0002204,4.14e-15,167;UBERON:0000926,9.91e-13,315;UBERON:0004120,9.91e-13,315;UBERON:0006603,9.91e-13,315;UBERON:0000923,2.36e-07,560;UBERON:0010316,2.36e-07,560;UBERON:0005291,2.36e-07,560;UBERON:0006598,2.36e-07,560;UBERON:0010317,2.36e-07,560;UBERON:0002532,2.36e-07,560;UBERON:0000178,3.92e-07,15;UBERON:0000179,3.92e-07,15;UBERON:0000463,3.92e-07,15;UBERON:0002050,4.00e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,3.14691421479123,3.0706351847777,3.40595471295367,0,0,0,0,0,0.880801318004542,2.21598163412751,3.00816671205213,4.34021741431704,55.5310376115012,31.74157926986,49.1969334181296,2.4717700592526,0,2.18325655069035,3.48643555358527,1.6446715520873,1.85823822537062,4.60307827715441,2.81776777182011,2.83778675866302,5.17118521104928,4.51839278508678,2.70852973188684,3.57660445130949,1.36453075028923,2.02251136000576,3.36692281607993,4.8139354061414,5.11469700639233,1.9791078011203,1.99463657621632,2.55734850319616,3.77272010217159,3.40431134814684,2.4912889959823,5.52747063564835,1.0429658368404,3.69221035998698,3.63239701580021,1.84138817993782,4.43047342417238,3.80259515361495,4.46469029926591,11.740884148469,20.5561394998086,20.5742343192864,17.0369121898905,0.570025487482497,0.19891667719909,0.730656615058536,0,0,0,0.853460445133014,0,0.574752439954483,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.903450714466637,0.127986611154418,2.49861453104692,2.13099526839615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.654895377488563,0,0,0,0.870648686496336,4.38761269712255,6.67773748054957,6.86393892936153,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9435774930792,0,4.90482835552803,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9461402577071,17.5789982001244,6.32501818449095,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54889657470352,3.8828556147351,3.30855429190677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,3.29731237272711,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0.507447609232169,0,1.70894156152249,0.952927101831156,2.46817363851717,1.29694662238543,1.08006287447623,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,1.14117339516596,0,0,0,3.37234957717769,8.67738740921505,5.53600108997424,0.343505344755765,11.9823898080299,7.60498766834214,10.5114959278502,0.586164286206121,0,0,0,0,0,0,6.00683535014765,0,0,0,0,0.296964680832639,0,0.994147647766298,1.1253553312841,0,0,0,1.59398390600856,0.552567831062295,0,0,0,0,0,0,15.3471711068062,0.591860433821602,7.18449277040819,0,0,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.60298219312704,0,0.221158519862449,0,0,0,0,1.00035336054936,0,0,0,0,0,0,2.13213910407454,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,1.99052386215701,1.50377859655677,0.611030144933625,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0.394584402849391,0,0,8.71974798873134,0,0,0,0,0,0,0,0,0,0,0,4.54289337429278,0,0,0,0,1.26085721434945,0,1.12990370390266,0,0,0.0633107959558787,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,2.0535806833799,0,0,0,1.95497680890578,1.14580212005842,0,0.199679000498991,0.858452096273142,0.446342914883745,0.470284307407084,0,0,0,0,0,0,0,0,1.0896272488926,0,0,0,1.1248694577575,0,0.0607495566580247,0,2.36417121897595,0.367182116944987,0,0,0,8.5763439164804,1.32418394073086,0,0,0,0,0,1.64185041498678,0,0,2.05173127149315,2.65013777824443,0.387848869084652,1.3223260174269,0,0,3.52398461473392,0.628817220398664,3.31391244277756,5.95399226174341,0,0,0,0,0,0,0.655745261419609,0,0,0.122026264901963,1.001527445652,0,1.77486482458964,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.27707087245721,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,1.12815492523886,0,0,0,0,0,0,0,0.413373593002368,0.0634158101939068,0,0.548257766857182,1.98484471355718,0,0,0.535701835878287,0.672567444437648,0.606965604236632,1.13831095675649,1.68534503309014,0,0,0.135939465953663,0.0657727735628491,0,0,1.49136876415977,0,0,0.913158720509496,0,0,1.6439605160631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,1.1598144313382,0.971421986118279,0,0,0,0,0,0,2.54674721756217,1.96703604453562,0,1.22574160876953,0,0.785233868459781,2.97046400327086,0,0,2.91350145737546,3.15843651070528,0,0,0,0,2.92134555298607,1.37618785021362,2.00675416412032,0,0.135982980381829,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,2.04602485189246,0.267964130156178,0.829169439458779,1.24119595034274,2.13233981900981,0.476128862927481,0.968833647540092,1.86224142887574,0,0.25458863311266,0,1.08858373948481,1.02669990325584,1.54909721933551,1.5061663132462,0.332660356546013,0,0,0,0,0,0.855690109280065,0.813792356631477,0.665756774185513,2.81783311027437,0 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| ||
|short_description=p3@MS4A6A | |||
}} | }} |
Latest revision as of 13:10, 18 September 2015
Short description: | p3@MS4A6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MS4A6A_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -7bp_to_ENST00000526677_5end |
EntrezGene: | MS4A6A |
HGNC: | 13375 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.85e-63 | 59 |
monocyte | 2.85e-63 | 59 |
monoblast | 2.85e-63 | 59 |
promonocyte | 2.85e-63 | 59 |
macrophage dendritic cell progenitor | 5.60e-63 | 61 |
myeloid leukocyte | 7.10e-56 | 72 |
granulocyte monocyte progenitor cell | 7.72e-56 | 67 |
defensive cell | 3.21e-55 | 48 |
phagocyte | 3.21e-55 | 48 |
myeloid lineage restricted progenitor cell | 8.18e-55 | 66 |
classical monocyte | 2.87e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.87e-48 | 42 |
myeloid cell | 1.21e-42 | 108 |
common myeloid progenitor | 1.21e-42 | 108 |
nongranular leukocyte | 2.26e-31 | 115 |
leukocyte | 2.97e-31 | 136 |
hematopoietic stem cell | 2.15e-28 | 168 |
hematopoietic lineage restricted progenitor cell | 2.47e-26 | 120 |
hematopoietic cell | 6.45e-26 | 177 |
hematopoietic oligopotent progenitor cell | 1.63e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.63e-24 | 161 |
macrophage | 3.80e-08 | 6 |
adult endothelial progenitor cell | 6.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.79e-54 | 98 |
blood island | 2.79e-54 | 98 |
hemolymphoid system | 4.30e-51 | 108 |
bone marrow | 3.06e-47 | 76 |
immune system | 2.43e-44 | 93 |
bone element | 1.47e-42 | 82 |
skeletal element | 2.70e-37 | 90 |
skeletal system | 6.46e-32 | 100 |
lateral plate mesoderm | 4.80e-24 | 203 |
adult organism | 2.66e-18 | 114 |
musculoskeletal system | 4.14e-15 | 167 |
mesoderm | 9.91e-13 | 315 |
mesoderm-derived structure | 9.91e-13 | 315 |
presumptive mesoderm | 9.91e-13 | 315 |
germ layer | 2.36e-07 | 560 |
germ layer / neural crest | 2.36e-07 | 560 |
embryonic tissue | 2.36e-07 | 560 |
presumptive structure | 2.36e-07 | 560 |
germ layer / neural crest derived structure | 2.36e-07 | 560 |
epiblast (generic) | 2.36e-07 | 560 |
blood | 3.92e-07 | 15 |
haemolymphatic fluid | 3.92e-07 | 15 |
organism substance | 3.92e-07 | 15 |
embryonic structure | 4.00e-07 | 564 |