FFCP PHASE1:Hg19::chr11:58980437..58980460,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:58980437..58980460,- to FFCP PHASE1:Hg19::chr11:58980437..58980460,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=219972 | |EntrezGene=219972 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29619 | |HGNC=29619 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZC6 | |UniProt=F5GZC6 | ||
|association_with_transcript=0bp_to_ENST00000545098_5end | |||
|cluster_id=chr11:58980437..58980460,- | |||
|coexpression_cluster_id=C3165 | |||
|description=CAGE_peak_2_at_MPEG1_5end | |||
|id=chr11:58980437..58980460,- | |||
|ontology_enrichment_celltype=CL:0000738!5.20e-55!140;CL:0002087!8.03e-52!119;CL:0002031!7.99e-46!124;CL:0000037!1.77e-45!172;CL:0000566!1.77e-45!172;CL:0002009!2.45e-45!65;CL:0000766!4.11e-44!76;CL:0002194!4.22e-44!63;CL:0000576!4.22e-44!63;CL:0000040!4.22e-44!63;CL:0000559!4.22e-44!63;CL:0000557!5.07e-42!71;CL:0002032!3.32e-41!165;CL:0000837!3.32e-41!165;CL:0000988!1.45e-40!182;CL:0002057!6.14e-40!42;CL:0000839!2.85e-38!70;CL:0000860!6.29e-36!45;CL:0000763!5.72e-31!112;CL:0000049!5.72e-31!112;CL:0000945!2.84e-11!24;CL:0000826!2.84e-11!24;CL:0002393!2.13e-09!9;CL:0002397!2.13e-09!9;CL:0000542!2.51e-09!53;CL:0000051!2.51e-09!53;CL:0000838!7.97e-09!52;CL:0000236!8.90e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.74e-35;33!CL:0002057;1.74e-35;33!CL:0000473;2.41e-35;39!CL:0000234;2.41e-35;39!CL:0000576;1.24e-33;48!CL:0000766;5.75e-25;69!CL:0002087;1.03e-16;104!CL:0000738;1.52e-13;136!CL:0000763;2.29e-12;100!CL:0000236;3.57e-09;13!CL:0000235;2.61e-08;6!CL:0002393;5.17e-08;6!CL:0002397;5.17e-08;6!CL:0000945;5.46e-08;24!CL:0000988;1.78e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,8.92e-59,61;CL:0000738,1.11e-58,136;CL:0002194,2.88e-57,59;CL:0000576,2.88e-57,59;CL:0000040,2.88e-57,59;CL:0000559,2.88e-57,59;CL:0000473,3.81e-56,48;CL:0000234,3.81e-56,48;CL:0000766,4.37e-56,72;CL:0002087,1.04e-55,115;CL:0000557,2.08e-53,67;CL:0000860,5.05e-49,42;CL:0002057,5.05e-49,42;CL:0000839,6.91e-49,66;CL:0000037,1.34e-48,168;CL:0002031,1.86e-48,120;CL:0000988,2.32e-44,177;CL:0002032,1.80e-43,161;CL:0000837,1.80e-43,161;CL:0000763,1.86e-38,108;CL:0000049,1.86e-38,108;CL:0002393,3.07e-11,9;CL:0002397,3.07e-11,9;CL:0000134,2.68e-09,354;CL:0002320,1.31e-08,361;CL:0000235,2.61e-08,6;CL:0000236,2.76e-08,14;CL:0000945,5.50e-08,24;CL:0000826,5.50e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;3.84e-35;42!CL:0000049;6.58e-12;108!UBERON:0004872;2.42e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.60e-47!102;UBERON:0003061!1.60e-47!102;UBERON:0002193!4.29e-43!112;UBERON:0002371!9.41e-37!80;UBERON:0001474!2.45e-32!86;UBERON:0002405!7.73e-31!115;UBERON:0007023!1.57e-29!115;UBERON:0004765!1.78e-24!101;UBERON:0001434!1.78e-24!101;UBERON:0003081!5.80e-15!216;UBERON:0002204!9.78e-10!167;UBERON:0000479!4.69e-08!787;UBERON:0000178!1.06e-07!15;UBERON:0000179!1.06e-07!15;UBERON:0000463!1.06e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.68e-09;15!UBERON:0000179;1.68e-09;15!UBERON:0000463;1.68e-09;15!UBERON:0002390;4.22e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.04e-58,98;UBERON:0003061,1.04e-58,98;UBERON:0002193,5.41e-54,108;UBERON:0002371,3.93e-46,76;UBERON:0002405,1.11e-44,93;UBERON:0001474,4.27e-41,82;UBERON:0004765,1.87e-35,90;UBERON:0001434,1.02e-29,100;UBERON:0003081,3.77e-23,203;UBERON:0002204,2.90e-13,167;UBERON:0007023,1.98e-12,114;UBERON:0000926,5.98e-11,315;UBERON:0004120,5.98e-11,315;UBERON:0006603,5.98e-11,315;UBERON:0000178,1.62e-09,15;UBERON:0000179,1.62e-09,15;UBERON:0000463,1.62e-09,15;UBERON:0002384,4.62e-08,371;UBERON:0000479,6.16e-07,773 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0,0,0,0,0,0,0,0,0,0.382067028739756,1.23150884174919,0.314843125254717,62.1515557421268,21.1106168953467,39.0136630756512,0,0,0,0.774672005803016,1.70603078984906,11.450417134059,43.7656372740183,41.3121561788492,48.6104350403508,200.628264918972,166.481344333755,184.166530858443,84.9125714472658,77.0866925125171,74.2307227234718,92.0418986146511,90.8681032528235,70.9227589349787,80.5538698502021,59.9416053278095,74.0189379551272,108.939635112771,79.3946160808106,60.9419189674538,75.4851781565845,53.7625115613956,67.8664923024156,92.4373354960126,115.534449747394,72.8844323410907,53.1060593300613,64.0278340965438,46.8847225585964,86.1921438726895,78.8665462320684,69.1332696385088,63.3146636446993,56.3201551893818,79.7083060067778,81.7289328555048,111.219846068245,96.8374905569106,101.402537429732,88.4433887854581,78.8316507111493,156.586111818214,125.698059308341,177.923224473668,73.2482751415009,66.0403368300979,72.7003331983243,19.3595868907455,31.1299008419415,40.02791642386,34.9918782504536,56.8562301591138,43.1064329965862,32.3911987664582,36.2540426723438,27.891435486363,18.79159005987,25.6123062843903,2.64342657158052,3.92355994087075,24.4947198840822,0.590129310341499,0,1.23360899399706,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.741432815810302,2.1403266247177,0,0,0.383220493601921,0,0,5.09704662918555,1.95325036156926,0,11.293133930833,9.34302261427254,2.49861453104692,12.0756398542449,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,4.51877810467109,0,0,1.29818957461873,0.174129737299267,1.59549552622638,356.781973960792,422.132244155734,338.026326209904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,3.87780264148325,0,0,0,0,0,1.77334191099179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,3.9313088667105,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,111.782520763678,17.3163156203036,59.60109607778,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,159.32715263996,157.708726709688,107.525309136346,0,0,0,0,0,0,0,2.36436912242313,0,3.59360501583295,0,0,0,0.670065061337395,0,5.24304916763028,0,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,66.165768359324,39.4756987498069,40.5564719653088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,2.01090682660736,0,4.9896214411693,0,0,0,0,31.9691993816267,31.3501254928374,36.4574199791464,36.9259251959573,49.3634727703433,36.3145054267922,36.7221377321918,27.7593811702995,0,0,0,27.4988699186064,0.721346064882224,0,0,0,0.191505370132367,0,0,0,7.75997908712854,0,0,0,23.4458589651401,31.4807543218034,0.851692475380653,0,0.614481528616916,1.56573275524691,1.00109485027145,0,0,0,0,0,0,0,7.03239260505091,0,0,0,0,0.890894042497916,0,0,0.140669416410513,0,0,0,4.38345574152353,27.9046754686459,0,0,4.67722260752064,0,0,0,20.9744671793017,2.56472854656027,52.6862803163268,0,0,0.556608588971108,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,2.00070672109872,0,0,0,0,0.957003479195758,0.183195186803725,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,10.9478812418636,9.55341696636063,9.77648231893801,0,0,0,1.01101699471016,3.21031058919516,1.40558667435203,0,0,0,1.18375320854817,30.247679012166,0,12.1318232886697,0,0,0,0,0,0,0,0,0,0,0,5.41652671550293,0,0,0,0,2.90967049465258,0,0.90392296312213,0,0,0.569797163602908,0,0,4.69596588426576,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,6.38732940334862,0,0,2.51354161145029,2.06244381610515,0.717873024576814,2.39614800598789,1.71690419254628,1.11585728720936,1.61240333968143,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,20.9225719142895,3.0952078182318,0.121499113316049,0,4.09789677955831,2.04572893726493,0,0,0,4.2881719582402,1.32418394073086,0,0,0,0,0,0,0,0,13.0431487973493,6.62534444561107,0,0.13223260174269,0,0,8.97014265568635,5.18774206828898,12.4271716604159,39.1971157231441,0,13.3971858218986,0,1.63205341010842,0.5013797880454,0.306345576763462,0,0,0,0,0.250381861413,0.573409195690071,0.332787154610557,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,1.17360902663555,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,0,0.159633859057151,0.615349092722265,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,2.1058891937792,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.317079050969534,0,1.64477330057155,3.96968942711435,0,0,0,0.336283722218824,1.82089681270989,0.91064876540519,3.72549954683083,0.115233987555779,0,0.611727596791485,0.328863867814245,0,0,3.06123062117005,0,0,4.56579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| ||
|short_description=p2@MPEG1 | |||
}} | }} |
Latest revision as of 12:14, 18 September 2015
Short description: | p2@MPEG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MPEG1_5end |
Coexpression cluster: | C3165_Dendritic_CD14_Monocytederived_Macrophage_splenic_CD14CD16_spleen |
Association with transcript: | 0bp_to_ENST00000545098_5end |
EntrezGene: | MPEG1 |
HGNC: | 29619 |
UniProt: | F5GZC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 8.92e-59 | 61 |
leukocyte | 1.11e-58 | 136 |
monopoietic cell | 2.88e-57 | 59 |
monocyte | 2.88e-57 | 59 |
monoblast | 2.88e-57 | 59 |
promonocyte | 2.88e-57 | 59 |
defensive cell | 3.81e-56 | 48 |
phagocyte | 3.81e-56 | 48 |
myeloid leukocyte | 4.37e-56 | 72 |
nongranular leukocyte | 1.04e-55 | 115 |
granulocyte monocyte progenitor cell | 2.08e-53 | 67 |
classical monocyte | 5.05e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.05e-49 | 42 |
myeloid lineage restricted progenitor cell | 6.91e-49 | 66 |
hematopoietic stem cell | 1.34e-48 | 168 |
hematopoietic lineage restricted progenitor cell | 1.86e-48 | 120 |
hematopoietic cell | 2.32e-44 | 177 |
hematopoietic oligopotent progenitor cell | 1.80e-43 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-43 | 161 |
myeloid cell | 1.86e-38 | 108 |
common myeloid progenitor | 1.86e-38 | 108 |
intermediate monocyte | 3.07e-11 | 9 |
CD14-positive, CD16-positive monocyte | 3.07e-11 | 9 |
mesenchymal cell | 2.68e-09 | 354 |
connective tissue cell | 1.31e-08 | 361 |
macrophage | 2.61e-08 | 6 |
B cell | 2.76e-08 | 14 |
lymphocyte of B lineage | 5.50e-08 | 24 |
pro-B cell | 5.50e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.04e-58 | 98 |
blood island | 1.04e-58 | 98 |
hemolymphoid system | 5.41e-54 | 108 |
bone marrow | 3.93e-46 | 76 |
immune system | 1.11e-44 | 93 |
bone element | 4.27e-41 | 82 |
skeletal element | 1.87e-35 | 90 |
skeletal system | 1.02e-29 | 100 |
lateral plate mesoderm | 3.77e-23 | 203 |
musculoskeletal system | 2.90e-13 | 167 |
adult organism | 1.98e-12 | 114 |
mesoderm | 5.98e-11 | 315 |
mesoderm-derived structure | 5.98e-11 | 315 |
presumptive mesoderm | 5.98e-11 | 315 |
blood | 1.62e-09 | 15 |
haemolymphatic fluid | 1.62e-09 | 15 |
organism substance | 1.62e-09 | 15 |
connective tissue | 4.62e-08 | 371 |
tissue | 6.16e-07 | 773 |