FFCP PHASE1:Hg19::chr11:5710921..5710932,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:5710921..5710932,+ to FFCP PHASE1:Hg19::chr11:5710921..5710932,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10346 | |EntrezGene=10346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16379 | |HGNC=16379 | ||
|TSSclassifier=strong | |||
|UniProt=C9J060 | |UniProt=C9J060 | ||
|association_with_transcript=0bp_to_ENST00000425490_5end | |||
|cluster_id=chr11:5710921..5710932,+ | |||
|description=CAGE_peak_5_at_TRIM22_5end | |||
|id=chr11:5710921..5710932,+ | |||
|ontology_enrichment_celltype=CL:0000048!2.06e-13!430;CL:0000723!1.09e-12!436;CL:0002057!7.54e-12!42;CL:0000034!1.31e-11!444;CL:0002371!4.92e-11!591;CL:0000144!4.38e-10!625;CL:0000860!5.60e-10!45;CL:0000134!4.58e-08!358;CL:0000359!9.33e-08!32;CL:0000222!2.35e-07!119;CL:0002320!5.56e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.14e-11;32!CL:0000860;8.81e-11;33!CL:0002057;8.81e-11;33!CL:0002559;1.98e-08;5!CL:0000473;5.92e-08;39!CL:0000234;5.92e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.31e-11,32;CL:0000048,6.77e-09,427;CL:0000723,1.83e-08,433;CL:0000860,2.22e-08,42;CL:0002057,2.22e-08,42;CL:0000034,2.53e-08,441;CL:0002559,3.49e-08,5;CL:0000473,1.01e-07,48;CL:0000234,1.01e-07,48;CL:0000192,2.08e-07,43;CL:0000514,2.08e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001981!2.79e-13!60;UBERON:0007500!2.79e-13!60;UBERON:0004537!2.79e-13!60;UBERON:0006965!2.79e-13!60;UBERON:0000055!3.21e-11!69;UBERON:0004872!7.60e-11!84;UBERON:0002049!2.34e-10!79;UBERON:0007798!2.34e-10!79;UBERON:0001637!4.50e-10!42;UBERON:0003509!4.50e-10!42;UBERON:0004572!4.50e-10!42;UBERON:0003081!7.83e-10!216;UBERON:0002204!1.10e-08!167;UBERON:0001009!1.80e-08!113;UBERON:0004535!2.87e-08!110;UBERON:0004573!4.34e-07!33;UBERON:0004571!4.34e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.54e-13;42!UBERON:0003509;5.54e-13;42!UBERON:0004572;5.54e-13;42!UBERON:0004573;6.66e-12;33!UBERON:0004571;6.66e-12;33!UBERON:0007500;4.19e-09;56!UBERON:0001981;4.19e-09;56!UBERON:0004537;4.19e-09;56!UBERON:0002073;1.98e-08;5!UBERON:0000055;2.62e-08;65!UBERON:0000947;1.51e-07;21!UBERON:0010191;1.51e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,5.79e-17,59;UBERON:0001981,5.79e-17,59;UBERON:0004537,5.79e-17,59;UBERON:0006965,5.79e-17,59;UBERON:0001637,9.68e-16,42;UBERON:0003509,9.68e-16,42;UBERON:0004572,9.68e-16,42;UBERON:0000055,1.38e-14,68;UBERON:0004872,4.38e-14,83;UBERON:0004573,2.62e-13,33;UBERON:0004571,2.62e-13,33;UBERON:0002049,2.06e-12,78;UBERON:0007798,2.06e-12,78;UBERON:0003081,4.42e-12,203;UBERON:0000926,1.32e-11,315;UBERON:0004120,1.32e-11,315;UBERON:0006603,1.32e-11,315;UBERON:0004535,6.71e-09,109;UBERON:0001009,2.05e-08,112;UBERON:0002073,3.49e-08,5;UBERON:0005086,3.49e-08,5;UBERON:0000947,8.25e-08,21;UBERON:0010191,8.25e-08,21;UBERON:0002204,5.99e-07,167 | |||
|phase1_expression=3.81524596468169,1.71280419112787,2.96004248601539,3.00219895059391,0.893922188854576,1.74467704820074,0,1.26343974685366,1.30592814099919,0,0.697801167972428,0,0,0,0,3.36162573225888,3.01347264011988,5.11217063271161,2.43966399395253,0,0.204000691244253,0,0.286235987131057,0.410623275218653,0.251085279189606,1.06978768047132,0.656804715599566,1.10195093839151,0.393364276848904,0,0,0.919421224478927,0.90361775633475,0.369754010166788,1.78174561334694,0,0.293600439334847,0.553995408531877,0.200544447470142,0.434021741431704,0.447830948479849,0.32389366601898,0,0.290796477559129,0,0.242584061187816,0,1.6446715520873,0.309706370895104,4.89077066947656,2.0492856522328,4.02019790810595,0.689491361473237,0.645484683583826,4.06279459783025,0.752969358170419,0.818718450173537,0.449446968890169,2.75475503133812,1.92557416245656,2.55734850319616,2.96866170168044,2.59302754908121,2.55734850319616,1.16083695451434,0,1.24564449799115,3.01498398308092,3.65038042894141,2.38907729175628,0.605399502633369,1.10483290796269,1.58231193720442,0.633765858935825,0.425208599930087,0.628975936525128,0.786300418025466,0.450530678524519,0.48217676009124,0.570025487482497,0.39783335439818,0.730656615058536,0,0.546138611262131,0,0.426730222566507,2.00197993518006,0.574752439954483,0,1.90810750907073,0.569212969109448,1.76171156811282,0.382273228125229,1.32171328579026,0,0,0,0.786021525498329,0.411202997999018,1.5046784585161,0.651844533267181,0.946895611469467,0,0.891283655081389,1.47302953737419,1.77227115666897,1.08321545506006,0.768547918354051,0.130059347559878,0.328875809207352,0,0.579606171470105,0.296573126324121,0,0,0.793165398882963,0.383220493601921,0.34362744548263,1.26509846009751,0.637130828648193,0,0,0.451725357233318,0.127986611154418,0,0.710331756132051,0.821127996921047,0.201606743224732,0.267440195783507,0.144824403882799,2.43806866313962,0,0,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,0,0.175669571386252,0.261958150995425,0,0.370784442784429,0,0,0,0.476981248610684,1.71598473234038,0.74291500265913,0.993812036833525,2.58070378531837,1.73570250803797,0,0.838998872419812,1.37559020970034,1.46296476575767,0.516833518338658,1.42306505074684,0,1.61131726843659,0.760272105718513,1.22031028774085,0.367663080345869,0,1.3394959242612,1.34717623575702,0.225222960966644,3.06633274931766,0.949265659568129,0.916008719652036,0,0,0,0,1.77282716330412,4.10468460520978,2.0078563452417,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0.936480230490962,1.71141546463335,0.747243402759005,0,0,0,0.61246251376468,0,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0,0.831192346452549,0,0.919463387397059,0,0.794025282120147,1.97328599257748,2.98980344345994,0.635795703478686,0.900273288253207,1.23663035086127,4.3798891807757,1.30281799432113,0.843881661206331,0.292311015483596,1.51460264546469,2.57739716198438,1.2931684545505,4.26011511019937,0.604512589365842,0.67824236924195,1.35282597214308,1.90922284413584,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,2.3218396401599,2.16563844500876,0,0,0,0,0,0,0.134831308160164,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0.343135620597051,0.329250856225877,0,0,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0.469634776943287,0.433099343283221,0,0.190254152234598,0,0,0.492434012174795,0,0,1.87467667973554,1.00789276919316,1.27597587518148,0.0895585227028483,0,0,2.95597942737566,0.264145302039678,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,1.80980402060889,0,0,0.797814349754612,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0.710783897485092,0,0.602878754119172,2.61460037580088,0.599837947092342,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0.868687840005475,0.205476322550383,1.43248770591916,0,0.591092280605782,0,0.513372145118994,0,0,1.54657762555539,0,0.637938751653163,0.749007023947182,0,0.414415513436035,0,0,0,0.831883446123229,0.356857977594324,1.89242898040722,0.35142424497814,0.601892199455438,0,0,0,0,1.99832313276591,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0.992431231275107,3.83654933220156,1.96462066103151,1.79394808957981,2.04682899626681,0.804269605718038,1.48418066444991,0.308419387605311,0.532685175939381,0.410635780069046,0.519254429183621,0,0,1.60405176242628,0.368323955743585,0.229628896329213,0.364182336013434,0.786746489756545,0,0,0,0,0.316654886678627,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.618246069886334,0,0,0.574265537996172,1.30012049207304,1.6068392984416,0.193341436584244,0.154048617114644,0.460511024178389,0.137836572484531,0.322260734604821,0.145016693914229,0,0.356128142586949,0.661139661443912,0,0.893288987462089,0.2023155617111,0,0,0.6970372701606,1.84820148105653,1.59691809095107,0,1.8532421910392,1.00187420719394,0.372158369359667,0.632758849437452,1.14378116354295,0,0,0.636406495851874,0,0.899362287916574,0.274537029736055,0.23562480469137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| 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| ||
|short_description=p5@TRIM22 | |||
}} | }} |
Latest revision as of 09:04, 18 September 2015
Short description: | p5@TRIM22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRIM22_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000425490_5end |
EntrezGene: | TRIM22 |
HGNC: | 16379 |
UniProt: | C9J060 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.31e-11 | 32 |
multi fate stem cell | 6.77e-09 | 427 |
somatic stem cell | 1.83e-08 | 433 |
classical monocyte | 2.22e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.22e-08 | 42 |
stem cell | 2.53e-08 | 441 |
hair follicle cell | 3.49e-08 | 5 |
defensive cell | 1.01e-07 | 48 |
phagocyte | 1.01e-07 | 48 |
smooth muscle cell | 2.08e-07 | 43 |
smooth muscle myoblast | 2.08e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 5.79e-17 | 59 |
blood vessel | 5.79e-17 | 59 |
blood vasculature | 5.79e-17 | 59 |
vascular cord | 5.79e-17 | 59 |
artery | 9.68e-16 | 42 |
arterial blood vessel | 9.68e-16 | 42 |
arterial system | 9.68e-16 | 42 |
vessel | 1.38e-14 | 68 |
splanchnic layer of lateral plate mesoderm | 4.38e-14 | 83 |
systemic artery | 2.62e-13 | 33 |
systemic arterial system | 2.62e-13 | 33 |
vasculature | 2.06e-12 | 78 |
vascular system | 2.06e-12 | 78 |
lateral plate mesoderm | 4.42e-12 | 203 |
mesoderm | 1.32e-11 | 315 |
mesoderm-derived structure | 1.32e-11 | 315 |
presumptive mesoderm | 1.32e-11 | 315 |
cardiovascular system | 6.71e-09 | 109 |
circulatory system | 2.05e-08 | 112 |
hair follicle | 3.49e-08 | 5 |
hair follicle placode | 3.49e-08 | 5 |
aorta | 8.25e-08 | 21 |
aortic system | 8.25e-08 | 21 |
musculoskeletal system | 5.99e-07 | 167 |