FFCP PHASE1:Hg19::chr11:31832581..31832601,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:31832581..31832601,- to FFCP PHASE1:Hg19::chr11:31832581..31832601,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=P26367 | |UniProt=P26367 | ||
|association_with_transcript=0bp_to_ENST00000379111,uc001mte.3_5end | |||
|cluster_id=chr11:31832581..31832601,- | |||
|coexpression_cluster_id=C798 | |||
|description=CAGE_peak_7_at_PAX6_5end | |||
|id=chr11:31832581..31832601,- | |||
|ontology_enrichment_celltype=CL:0002319!7.15e-09!25;CL:0000133!4.42e-07!59;CL:0000128!5.45e-07!7;CL:0000126!5.45e-07!7;CL:0000127!5.45e-07!7;CL:0002453!5.45e-07!7;CL:0000221!9.36e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000306;3.85e-14;4!CL:0002222;3.85e-14;4!CL:0002224;3.85e-14;4!CL:0000075;5.58e-13;27!CL:0000064;1.08e-11;3!CL:0000067;1.08e-11;3!CL:0005012;1.08e-11;3!CL:0002304;1.08e-11;3!CL:0002605;1.25e-10;3!CL:0002319;1.71e-10;25!CL:0000047;4.46e-08;2!CL:0000128;1.11e-07;7!CL:0000126;1.11e-07;7!CL:0000127;1.11e-07;7!CL:0000575;1.76e-07;2!CL:0000710;2.29e-07;20!CL:0002077;3.10e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,4.57e-14,4;CL:0002222,4.57e-14,4;CL:0002224,4.57e-14,4;CL:0000075,6.76e-13,27;CL:0000133,1.00e-11,59;CL:0000064,1.12e-11,3;CL:0000067,1.12e-11,3;CL:0005012,1.12e-11,3;CL:0002304,1.12e-11,3;CL:0000221,1.40e-11,72;CL:0002605,9.43e-11,3;CL:0000047,1.40e-10,8;CL:0002319,1.71e-10,25;CL:0002077,6.46e-08,34;CL:0000128,1.13e-07,7;CL:0000126,1.13e-07,7;CL:0000127,1.13e-07,7;CL:0002453,1.13e-07,7;CL:0000575,1.35e-07,2;CL:0000710,2.55e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.23e-12;3!CL:0000133;3.16e-08;59 | |||
|ontology_enrichment_disease=DOID:0050687!1.11e-14!143;DOID:305!3.31e-11!106;DOID:14566!3.64e-10!239;DOID:162!7.50e-10!235 | |||
|ontology_enrichment_disease_v019=DOID:154;7.60e-08;2!DOID:4236;7.60e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,5.22e-08,2;DOID:4236,5.22e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002346!9.78e-28!90;UBERON:0003075!1.96e-27!86;UBERON:0007284!1.96e-27!86;UBERON:0000073!3.01e-26!94;UBERON:0001016!3.01e-26!94;UBERON:0005743!7.07e-26!86;UBERON:0001017!1.16e-23!82;UBERON:0001049!7.82e-22!57;UBERON:0005068!7.82e-22!57;UBERON:0006241!7.82e-22!57;UBERON:0007135!7.82e-22!57;UBERON:0003056!3.38e-21!61;UBERON:0000924!3.67e-18!173;UBERON:0006601!3.67e-18!173;UBERON:0000033!7.01e-18!123;UBERON:0002616!7.21e-18!59;UBERON:0000955!1.05e-17!69;UBERON:0006238!1.05e-17!69;UBERON:0004121!1.21e-17!169;UBERON:0000153!5.76e-17!129;UBERON:0007811!5.76e-17!129;UBERON:0007625!1.25e-12!11;UBERON:0002780!1.72e-12!41;UBERON:0001890!1.72e-12!41;UBERON:0006240!1.72e-12!41;UBERON:0003076!2.00e-12!15;UBERON:0003057!2.00e-12!15;UBERON:0000970!4.62e-12!20;UBERON:0003080!5.05e-12!42;UBERON:0002020!6.90e-12!34;UBERON:0003528!6.90e-12!34;UBERON:0002104!2.87e-11!21;UBERON:0002791!3.22e-11!33;UBERON:0000019!6.83e-11!19;UBERON:0000047!6.83e-11!19;UBERON:0004088!6.83e-11!19;UBERON:0003072!6.83e-11!19;UBERON:0003071!6.83e-11!19;UBERON:0004128!6.83e-11!19;UBERON:0001893!1.01e-10!34;UBERON:0001869!1.83e-10!32;UBERON:0000020!6.73e-10!23;UBERON:0004733!1.60e-09!12;UBERON:0002028!1.60e-09!12;UBERON:0007277!1.60e-09!12;UBERON:0001801!1.72e-09!14;UBERON:0001456!1.82e-09!21;UBERON:0001032!2.65e-09!24;UBERON:0004456!2.65e-09!24;UBERON:0002680!6.85e-09!9;UBERON:0001895!6.85e-09!9;UBERON:0010092!6.85e-09!9;UBERON:0004732!1.37e-08!13;UBERON:0000956!3.12e-08!25;UBERON:0000203!3.12e-08!25;UBERON:0000488!4.97e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000970;2.30e-26;20!UBERON:0002104;5.85e-25;21!UBERON:0007625;3.24e-24;11!UBERON:0000019;1.51e-23;19!UBERON:0000047;1.51e-23;19!UBERON:0004088;1.51e-23;19!UBERON:0010230;1.51e-23;19!UBERON:0001801;5.74e-23;14!UBERON:0000020;1.63e-22;23!UBERON:0001032;1.91e-21;24!UBERON:0004456;1.91e-21;24!UBERON:0001456;4.89e-21;21!UBERON:0000488;7.66e-15;4!UBERON:0010077;3.85e-14;4!UBERON:0005389;3.85e-14;4!UBERON:0000484;3.85e-14;4!UBERON:0000965;3.85e-14;4!UBERON:0001803;3.85e-14;4!UBERON:0001778;1.08e-11;3!UBERON:0001775;1.08e-11;3!UBERON:0002203;6.82e-10;6!UBERON:0001768;6.82e-10;6!UBERON:0002200;6.82e-10;6!UBERON:0010371;3.22e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.27e-25,21;UBERON:0002104,5.27e-25,21;UBERON:0007625,3.59e-24,11;UBERON:0001801,5.51e-23,14;UBERON:0000019,2.86e-22,20;UBERON:0000047,2.86e-22,20;UBERON:0010312,2.86e-22,20;UBERON:0004088,2.86e-22,20;UBERON:0010230,2.86e-22,20;UBERON:0003072,2.86e-22,20;UBERON:0004128,2.86e-22,20;UBERON:0003071,2.86e-22,20;UBERON:0000020,1.75e-21,24;UBERON:0001032,1.75e-21,24;UBERON:0004456,1.75e-21,24;UBERON:0001456,5.46e-20,22;UBERON:0003075,6.74e-16,82;UBERON:0007284,6.74e-16,82;UBERON:0002346,6.73e-15,86;UBERON:0000488,7.96e-15,4;UBERON:0010077,4.57e-14,4;UBERON:0005389,4.57e-14,4;UBERON:0000484,4.57e-14,4;UBERON:0002546,4.57e-14,4;UBERON:0000965,4.57e-14,4;UBERON:0001803,4.57e-14,4;UBERON:0003073,4.57e-14,4;UBERON:0005426,4.57e-14,4;UBERON:0005085,2.20e-13,31;UBERON:0003056,2.95e-13,61;UBERON:0010371,1.32e-12,104;UBERON:0001778,1.12e-11,3;UBERON:0001775,1.12e-11,3;UBERON:0004121,6.03e-11,171;UBERON:0000924,6.03e-11,171;UBERON:0006601,6.03e-11,171;UBERON:0002203,6.99e-10,6;UBERON:0001768,6.99e-10,6;UBERON:0002200,6.99e-10,6;UBERON:0001017,9.00e-09,81;UBERON:0010314,9.86e-09,132;UBERON:0001016,1.62e-07,89;UBERON:0001444,1.65e-07,49;UBERON:0000076,4.87e-07,8 | |||
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| ||
|short_description=p7@PAX6 | |||
}} | }} |
Latest revision as of 14:56, 17 September 2015
Short description: | p7@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PAX6_5end |
Coexpression cluster: | C798_cerebellum_small_carcinosarcoma_argyrophil_Neural_gastric_Ciliary |
Association with transcript: | 0bp_to_ENST00000379111, uc001mte.3_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | P26367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 4.57e-14 | 4 |
vertebrate lens cell | 4.57e-14 | 4 |
lens epithelial cell | 4.57e-14 | 4 |
columnar/cuboidal epithelial cell | 6.76e-13 | 27 |
neurectodermal cell | 1.00e-11 | 59 |
ciliated cell | 1.12e-11 | 3 |
ciliated epithelial cell | 1.12e-11 | 3 |
multi-ciliated epithelial cell | 1.12e-11 | 3 |
non-pigmented ciliary epithelial cell | 1.12e-11 | 3 |
ectodermal cell | 1.40e-11 | 72 |
astrocyte of the cerebral cortex | 9.43e-11 | 3 |
neuronal stem cell | 1.40e-10 | 8 |
neural cell | 1.71e-10 | 25 |
ecto-epithelial cell | 6.46e-08 | 34 |
oligodendrocyte | 1.13e-07 | 7 |
macroglial cell | 1.13e-07 | 7 |
astrocyte | 1.13e-07 | 7 |
oligodendrocyte precursor cell | 1.13e-07 | 7 |
corneal epithelial cell | 1.35e-07 | 2 |
neurecto-epithelial cell | 2.55e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 5.22e-08 | 2 |
carcinosarcoma | 5.22e-08 | 2 |