FFCP PHASE1:Hg19::chr11:31531291..31531345,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:31531291..31531345,+ to FFCP PHASE1:Hg19::chr11:31531291..31531345,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26610 | |EntrezGene=26610 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1171 | |HGNC=1171 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EB1,B4E3W0,G5E9D4,E9PPJ9 | |UniProt=Q96EB1,B4E3W0,G5E9D4,E9PPJ9 | ||
|association_with_transcript=0bp_to_ENST00000350638,ENST00000379163,ENST00000395934,ENST00000474374,NM_019040,uc001mta.1,uc001mtb.2,uc001mtc.2,uc010rdz.1_5end | |||
|cluster_id=chr11:31531291..31531345,+ | |||
|description=CAGE_peak_1_at_ELP4_5end | |||
|id=chr11:31531291..31531345,+ | |||
|ontology_enrichment_celltype=CL:0000542!5.88e-12!53;CL:0000051!5.88e-12!53;CL:0000838!1.54e-11!52;CL:0000945!2.26e-07!24;CL:0000826!2.26e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000542;9.67e-08;53!CL:0000945;2.50e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.88e-12,53;CL:0000051,5.88e-12,53;CL:0000838,1.54e-11,52;CL:0000945,2.26e-07,24;CL:0000826,2.26e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;9.67e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!7.88e-08!51;DOID:0060083!7.88e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.88e-08,51;DOID:0060083,7.88e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.61e-13!57;UBERON:0005068!9.61e-13!57;UBERON:0006241!9.61e-13!57;UBERON:0007135!9.61e-13!57;UBERON:0003075!4.93e-12!86;UBERON:0007284!4.93e-12!86;UBERON:0007023!1.77e-11!115;UBERON:0002616!2.06e-11!59;UBERON:0000153!2.49e-11!129;UBERON:0007811!2.49e-11!129;UBERON:0005743!2.67e-11!86;UBERON:0002346!4.51e-11!90;UBERON:0000955!9.88e-11!69;UBERON:0006238!9.88e-11!69;UBERON:0003056!1.53e-10!61;UBERON:0001017!1.92e-10!82;UBERON:0000033!3.77e-10!123;UBERON:0002780!7.37e-10!41;UBERON:0001890!7.37e-10!41;UBERON:0006240!7.37e-10!41;UBERON:0003080!2.55e-09!42;UBERON:0000073!6.52e-09!94;UBERON:0001016!6.52e-09!94;UBERON:0001893!2.08e-08!34;UBERON:0002791!3.35e-08!33;UBERON:0002020!4.86e-08!34;UBERON:0003528!4.86e-08!34;UBERON:0001869!7.79e-08!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.62e-08;53!UBERON:0002616;5.62e-08;53!UBERON:0002780;2.50e-07;41!UBERON:0001890;2.50e-07;41!UBERON:0003528;3.52e-07;34!UBERON:0002020;3.52e-07;34!UBERON:0001893;3.72e-07;34!UBERON:0002791;4.40e-07;32!UBERON:0001869;5.85e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.66e-13,56;UBERON:0005068,2.66e-13,56;UBERON:0006241,2.66e-13,56;UBERON:0007135,2.66e-13,56;UBERON:0003075,3.46e-13,82;UBERON:0007284,3.46e-13,82;UBERON:0000073,1.41e-12,53;UBERON:0002616,1.41e-12,53;UBERON:0002346,4.06e-12,86;UBERON:0000955,3.68e-11,68;UBERON:0006238,3.68e-11,68;UBERON:0007023,4.05e-11,114;UBERON:0003056,5.60e-11,61;UBERON:0001017,8.03e-11,81;UBERON:0010371,2.46e-10,104;UBERON:0002780,7.37e-10,41;UBERON:0001890,7.37e-10,41;UBERON:0003080,7.37e-10,41;UBERON:0006240,7.37e-10,41;UBERON:0001016,1.95e-08,89;UBERON:0001893,2.08e-08,34;UBERON:0003528,4.86e-08,34;UBERON:0002020,4.86e-08,34;UBERON:0002791,6.48e-08,32;UBERON:0001869,7.79e-08,32;UBERON:0010314,5.94e-07,132 | |||
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| ||
|short_description=p1@ELP4 | |||
}} | }} |
Latest revision as of 14:35, 17 September 2015
Short description: | p1@ELP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ELP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000350638, ENST00000379163, ENST00000395934, ENST00000474374, NM_019040, uc001mta.1, uc001mtb.2, uc001mtc.2, uc010rdz.1_5end |
EntrezGene: | ELP4 |
HGNC: | 1171 |
UniProt: | Q96EB1B4E3W0G5E9D4E9PPJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.88e-12 | 53 |
common lymphoid progenitor | 5.88e-12 | 53 |
lymphoid lineage restricted progenitor cell | 1.54e-11 | 52 |
lymphocyte of B lineage | 2.26e-07 | 24 |
pro-B cell | 2.26e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.66e-13 | 56 |
neural rod | 2.66e-13 | 56 |
future spinal cord | 2.66e-13 | 56 |
neural keel | 2.66e-13 | 56 |
neural plate | 3.46e-13 | 82 |
presumptive neural plate | 3.46e-13 | 82 |
regional part of nervous system | 1.41e-12 | 53 |
regional part of brain | 1.41e-12 | 53 |
neurectoderm | 4.06e-12 | 86 |
brain | 3.68e-11 | 68 |
future brain | 3.68e-11 | 68 |
adult organism | 4.05e-11 | 114 |
pre-chordal neural plate | 5.60e-11 | 61 |
central nervous system | 8.03e-11 | 81 |
ecto-epithelium | 2.46e-10 | 104 |
regional part of forebrain | 7.37e-10 | 41 |
forebrain | 7.37e-10 | 41 |
anterior neural tube | 7.37e-10 | 41 |
future forebrain | 7.37e-10 | 41 |
nervous system | 1.95e-08 | 89 |
telencephalon | 2.08e-08 | 34 |
brain grey matter | 4.86e-08 | 34 |
gray matter | 4.86e-08 | 34 |
regional part of telencephalon | 6.48e-08 | 32 |
cerebral hemisphere | 7.79e-08 | 32 |
structure with developmental contribution from neural crest | 5.94e-07 | 132 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.88e-08 | 51 |
immune system cancer | 7.88e-08 | 51 |