FFCP PHASE1:Hg19::chr11:208610..208627,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:208610..208627,- to FFCP PHASE1:Hg19::chr11:208610..208627,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:208610..208627,- | |||
|coexpression_cluster_id=C3131 | |||
|description=CAGE_peak_at_chr11:208610..208627,- | |||
|id=chr11:208610..208627,- | |||
|ontology_enrichment_celltype=CL:0002371!7.70e-28!591;CL:0000144!1.86e-26!625;CL:0000048!3.45e-23!430;CL:0000034!1.35e-22!444;CL:0000012!1.63e-22!682;CL:0000723!3.27e-22!436;CL:0000738!8.21e-22!140;CL:0000003!8.63e-22!722;CL:0000548!4.06e-21!679;CL:0000004!4.06e-21!679;CL:0000255!4.06e-21!679;CL:0000766!7.41e-20!76;CL:0002320!8.69e-18!365;CL:0000134!1.23e-17!358;CL:0002031!4.99e-16!124;CL:0000988!7.19e-16!182;CL:0000557!1.02e-15!71;CL:0002087!1.26e-15!119;CL:0000219!1.27e-15!390;CL:0000063!5.67e-15!578;CL:0000037!1.08e-14!172;CL:0000566!1.08e-14!172;CL:0002009!1.60e-14!65;CL:0002057!1.68e-14!42;CL:0000839!2.24e-14!70;CL:0002194!1.58e-13!63;CL:0000576!1.58e-13!63;CL:0000040!1.58e-13!63;CL:0000559!1.58e-13!63;CL:0000860!1.96e-13!45;CL:0002032!1.24e-12!165;CL:0000837!1.24e-12!165;CL:0000763!2.23e-10!112;CL:0000049!2.23e-10!112;CL:0000081!4.57e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.32e-16;48!CL:0000860;5.93e-15;33!CL:0002057;5.93e-15;33!CL:0000766;9.13e-15;69!CL:0000473;6.53e-12;39!CL:0000234;6.53e-12;39!CL:0000094;2.43e-11;8!CL:0000081;2.69e-09;11!CL:0002087;6.14e-09;104!CL:0000624;6.76e-09;6!CL:0000738;7.09e-09;136!CL:0002393;6.87e-08;6!CL:0002397;6.87e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.83e-38,136;CL:0000766,4.64e-32,72;CL:0000988,5.62e-28,177;CL:0002031,1.90e-27,120;CL:0000037,2.40e-27,168;CL:0000860,5.13e-26,42;CL:0002057,5.13e-26,42;CL:0002087,6.66e-26,115;CL:0000557,4.14e-25,67;CL:0000473,2.26e-24,48;CL:0000234,2.26e-24,48;CL:0002032,2.68e-24,161;CL:0000837,2.68e-24,161;CL:0000839,1.15e-22,66;CL:0002009,1.56e-22,61;CL:0002194,1.09e-20,59;CL:0000576,1.09e-20,59;CL:0000040,1.09e-20,59;CL:0000559,1.09e-20,59;CL:0000763,1.89e-19,108;CL:0000049,1.89e-19,108;CL:0000048,7.73e-18,427;CL:0000034,2.71e-17,441;CL:0000723,4.53e-17,433;CL:0002320,2.01e-16,361;CL:0000134,2.28e-16,354;CL:0000219,2.74e-14,386;CL:0002393,2.21e-11,9;CL:0002397,2.21e-11,9;CL:0000094,3.09e-11,8;CL:0000081,3.85e-09,11;CL:0000624,5.85e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!7.00e-20!216;UBERON:0002384!1.13e-16!375;UBERON:0002193!1.44e-15!112;UBERON:0002390!1.62e-15!102;UBERON:0003061!1.62e-15!102;UBERON:0001474!6.80e-15!86;UBERON:0002371!9.34e-15!80;UBERON:0002405!1.59e-13!115;UBERON:0002204!4.75e-13!167;UBERON:0004765!3.27e-12!101;UBERON:0001434!3.27e-12!101;UBERON:0004535!8.67e-09!110;UBERON:0001009!4.08e-08!113;UBERON:0001637!4.50e-08!42;UBERON:0003509!4.50e-08!42;UBERON:0004572!4.50e-08!42;UBERON:0002049!4.83e-08!79;UBERON:0007798!4.83e-08!79;UBERON:0000926!1.53e-07!448;UBERON:0004120!1.53e-07!448;UBERON:0006603!1.53e-07!448;UBERON:0000055!6.16e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.41e-26,203;UBERON:0002371,1.92e-22,76;UBERON:0001474,8.46e-22,82;UBERON:0002390,2.64e-21,98;UBERON:0003061,2.64e-21,98;UBERON:0002193,1.53e-20,108;UBERON:0002405,1.21e-19,93;UBERON:0004765,1.78e-18,90;UBERON:0002384,1.28e-15,371;UBERON:0001434,4.00e-15,100;UBERON:0002204,3.13e-12,167;UBERON:0000926,2.08e-11,315;UBERON:0004120,2.08e-11,315;UBERON:0006603,2.08e-11,315;UBERON:0001637,7.83e-08,42;UBERON:0003509,7.83e-08,42;UBERON:0004572,7.83e-08,42;UBERON:0004535,6.82e-07,109 | |||
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| ||
|short_description=p@chr11:208610..208627,- | |||
}} | }} |
Latest revision as of 20:58, 23 July 2015
Short description: | p@chr11:208610..208627, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:208610..208627, - |
Coexpression cluster: | C3131_CD8_Natural_Peripheral_CD4_Eosinophils_CD14_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.41e-26 | 203 |
bone marrow | 1.92e-22 | 76 |
bone element | 8.46e-22 | 82 |
hematopoietic system | 2.64e-21 | 98 |
blood island | 2.64e-21 | 98 |
hemolymphoid system | 1.53e-20 | 108 |
immune system | 1.21e-19 | 93 |
skeletal element | 1.78e-18 | 90 |
connective tissue | 1.28e-15 | 371 |
skeletal system | 4.00e-15 | 100 |
musculoskeletal system | 3.13e-12 | 167 |
mesoderm | 2.08e-11 | 315 |
mesoderm-derived structure | 2.08e-11 | 315 |
presumptive mesoderm | 2.08e-11 | 315 |
artery | 7.83e-08 | 42 |
arterial blood vessel | 7.83e-08 | 42 |
arterial system | 7.83e-08 | 42 |
cardiovascular system | 6.82e-07 | 109 |