FFCP PHASE1:Hg19::chr11:129990662..129990681,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:129990662..129990681,+ to FFCP PHASE1:Hg19::chr11:129990662..129990681,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:129990662..129990681,+ | |||
|coexpression_cluster_id=C880 | |||
|description=CAGE_peak_at_chr11:129990662..129990681,+ | |||
|id=chr11:129990662..129990681,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.20e-15!42;CL:0000860!3.26e-13!45;CL:0002194!4.99e-13!63;CL:0000576!4.99e-13!63;CL:0000040!4.99e-13!63;CL:0000559!4.99e-13!63;CL:0002009!2.82e-12!65;CL:0000766!4.82e-10!76;CL:0000839!1.08e-09!70;CL:0000557!3.88e-09!71;CL:0000223!6.78e-09!59;CL:0002076!3.53e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.25e-21;33!CL:0002057;9.25e-21;33!CL:0000473;1.32e-19;39!CL:0000234;1.32e-19;39!CL:0000576;1.01e-11;48!CL:0000766;1.16e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.52e-22,48;CL:0000234,8.52e-22,48;CL:0000860,1.84e-18,42;CL:0002057,1.84e-18,42;CL:0002194,1.67e-17,59;CL:0000576,1.67e-17,59;CL:0000040,1.67e-17,59;CL:0000559,1.67e-17,59;CL:0002009,3.12e-16,61;CL:0000766,1.33e-14,72;CL:0000839,6.19e-14,66;CL:0000557,5.89e-13,67;CL:0000223,7.65e-09,58;CL:0002076,2.54e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002057;5.55e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.15e-13!659;UBERON:0000467!1.83e-13!625;UBERON:0000480!2.17e-13!626;UBERON:0000062!1.71e-12!511;UBERON:0000922!7.14e-09!612;UBERON:0002050!1.39e-08!605;UBERON:0005423!1.39e-08!605;UBERON:0000923!2.40e-08!604;UBERON:0005291!2.40e-08!604;UBERON:0006598!2.40e-08!604;UBERON:0002532!2.40e-08!604;UBERON:0002371!7.08e-08!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.49e-11,76;UBERON:0001474,2.52e-09,82;UBERON:0002405,1.25e-08,93;UBERON:0004765,6.71e-08,90;UBERON:0001434,2.41e-07,100 | |||
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| ||
|short_description=p@chr11:129990662..129990681,+ | |||
}} | }} |
Latest revision as of 19:58, 23 July 2015
Short description: | p@chr11:129990662..129990681, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:129990662..129990681, + |
Coexpression cluster: | C880_CD14_Monocytederived_pineal_Neutrophils_leiomyoma_Hepatocyte_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.52e-22 | 48 |
phagocyte | 8.52e-22 | 48 |
classical monocyte | 1.84e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.84e-18 | 42 |
monopoietic cell | 1.67e-17 | 59 |
monocyte | 1.67e-17 | 59 |
monoblast | 1.67e-17 | 59 |
promonocyte | 1.67e-17 | 59 |
macrophage dendritic cell progenitor | 3.12e-16 | 61 |
myeloid leukocyte | 1.33e-14 | 72 |
myeloid lineage restricted progenitor cell | 6.19e-14 | 66 |
granulocyte monocyte progenitor cell | 5.89e-13 | 67 |
endodermal cell | 7.65e-09 | 58 |
endo-epithelial cell | 2.54e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.49e-11 | 76 |
bone element | 2.52e-09 | 82 |
immune system | 1.25e-08 | 93 |
skeletal element | 6.71e-08 | 90 |
skeletal system | 2.41e-07 | 100 |