FFCP PHASE1:Hg19::chr11:119289379..119289398,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:119289379..119289398,- to FFCP PHASE1:Hg19::chr11:119289379..119289398,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7070 | |EntrezGene=7070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11801 | |HGNC=11801 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBB0 | |UniProt=Q9HBB0 | ||
|association_with_transcript=87bp_to_AK314018_5end | |||
|cluster_id=chr11:119289379..119289398,- | |||
|coexpression_cluster_id=C2100 | |||
|description=CAGE_peak_7_at_THY1_5end | |||
|id=chr11:119289379..119289398,- | |||
|ontology_enrichment_celltype=CL:0000057!4.49e-25!75;CL:0000055!2.24e-21!180;CL:0002620!5.35e-11!23;CL:0002334!4.95e-10!12;CL:0002570!3.71e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002570;7.58e-11;8!CL:0000135;3.67e-09;3!CL:0000388;3.67e-09;3!CL:0002334;5.62e-09;12!CL:0000499;5.35e-07;28!CL:0000327;5.83e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.65e-20,76;CL:0002570,6.03e-11,8;CL:0000136,1.05e-09,15;CL:0002334,1.70e-09,12;CL:0000135,3.52e-09,3;CL:0000388,3.52e-09,3;CL:0000134,2.25e-07,354;CL:0002320,5.46e-07,361;CL:0000499,6.25e-07,28;CL:0000327,7.33e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.53e-11!57;UBERON:0005068!2.53e-11!57;UBERON:0006241!2.53e-11!57;UBERON:0007135!2.53e-11!57;UBERON:0002020!3.47e-11!34;UBERON:0003528!3.47e-11!34;UBERON:0001869!8.88e-11!32;UBERON:0001893!2.11e-10!34;UBERON:0001013!2.14e-10!14;UBERON:0000475!2.64e-10!365;UBERON:0001017!3.52e-10!82;UBERON:0002791!4.80e-10!33;UBERON:0002616!7.72e-10!59;UBERON:0002780!8.55e-10!41;UBERON:0001890!8.55e-10!41;UBERON:0006240!8.55e-10!41;UBERON:0002199!1.38e-09!45;UBERON:0002416!1.38e-09!45;UBERON:0005743!1.56e-09!86;UBERON:0000955!1.61e-09!69;UBERON:0006238!1.61e-09!69;UBERON:0002619!1.79e-09!22;UBERON:0003080!2.36e-09!42;UBERON:0000956!2.37e-09!25;UBERON:0000203!2.37e-09!25;UBERON:0000073!2.87e-08!94;UBERON:0001016!2.87e-08!94;UBERON:0001950!2.91e-08!20;UBERON:0003075!5.56e-08!86;UBERON:0007284!5.56e-08!86;UBERON:0002346!1.15e-07!90;UBERON:0002097!2.01e-07!40;UBERON:0000033!4.18e-07!123;UBERON:0003056!7.34e-07!61;UBERON:0003102!7.99e-07!95;UBERON:0000153!9.51e-07!129;UBERON:0007811!9.51e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;7.09e-13;14!UBERON:0007846;3.67e-09;3!UBERON:0000043;3.67e-09;3!UBERON:0007845;3.67e-09;3!UBERON:0002072;2.51e-08;5!UBERON:0004457;6.81e-07;9!UBERON:0000042;6.81e-07;9!UBERON:0002619;8.75e-07;22!UBERON:0003528;9.53e-07;34!UBERON:0002020;9.53e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.67e-13,14;UBERON:0002199,1.62e-09,46;UBERON:0002416,1.62e-09,46;UBERON:0007846,3.52e-09,3;UBERON:0000043,3.52e-09,3;UBERON:0007845,3.52e-09,3;UBERON:0002072,9.70e-09,5;UBERON:0003528,2.56e-08,34;UBERON:0002020,2.56e-08,34;UBERON:0002384,6.29e-07,371 | |||
|phase1_expression=1.2717486548939,3.21150785836475,0.845726424575827,2.00146596706261,3.12872766099101,0.872338524100369,0,1.89515962028049,3.13422753839806,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0.730310090387373,0,0.246242116153576,0.204000691244253,1.25381888591235,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.1686349143074,1.00267582127178,2.31754430337318,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,4.58938593198102,1.06400514659507,1.68203280042692,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0.936480230490962,0,0.448346041655403,0.704606991862589,0.485618833104395,0.561803226808994,0.408308342509787,0.859840221182376,1.34323515528495,0,1.48360157567134,0,1.43723628363248,0.168336113954066,0.125118519871964,0.277064115484183,1.75591048352335,1.5324389789951,0.150238058906597,0.113432183160021,1.61450672119976,1.06778694409284,1.27159140695737,0.600182192168805,0.92747276314595,0.257640540045629,1.30281799432113,0.168776332241266,1.85130309806277,0.252433774244115,1.10459878370759,1.45481451136931,1.42003837006646,2.21654616100809,0.67824236924195,0,0,0,0.853815942907168,0.132529768321485,0.69716365721711,0.414644220061482,0.756962552626885,0.36497735907583,0,0.643240938192885,1.38134921352481,0.928735856063958,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,1.29271715757778,3.57656445851882,2.535908257668,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0,0,0.977208552881205,0,0,0.602878754119172,0,1.49959486773086,0,0,0,0.718874566474748,0,0,0.579125226670317,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,1.03985430765404,4.10386674233472,0.788512075169673,0.937131319941706,0,4.5481500811197,1.03473071292505,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0.496215615637554,0.61384789315225,1.96462066103151,0.512556597022804,2.55853624533352,0.64341568457443,1.48418066444991,2.15893571323718,1.9531789784444,0.328508624055237,1.55776328755086,1.62694529843943,0,0,0,0.918515585316854,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0,0,0,0,1.88887408098384,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0.318203247925937,0,0,0,0.353437207037059,0.404364963146632,0,0,0,0,3.16950440270266,0.272999822815972,2.82810863907426,0,0,1.99031692572366,0,0.578775534266688,0,0.608731130888112,0.30982349809975,0,0.286822704408103,0.88424136911809,0.7133421029625,0.354761064070598,1.47775344708365,1.64647446479951,0.75894634753143,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.19924798825107,0,0,0,0,1.55519793830904,0,0,0,0.394573622547734,0,1.11136990144637,0.969332746095218,0.927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,1.5677537021303,0,0.331737779793674,0,1.31631238292384,0,0,0.153900517007594,0.455768223388005,0,0,0,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0.522109747527277,0.067401132980677,0,1.1713222286267,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,1.54787429224455,0,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0.795229689809303,1.0896272488926,0.160753148465019,0.962776056180637,0.83088067605837,0,0,0.425246896606173,0,0.394028536495991,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,1.63293680054705,0,0,0.340776043570843,0,0.146552233678082,0,1.55139547633861,1.19009341568421,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,2.92863035764712,1.752673029891,0,0.110929051536852,0.558867626472451,0,0,0,0,0,0,0,0.597019211547496,1.40227985908335,1.66441758450784,0.568209015825267,1.0062716070103,0.889811221596536,0,0.453692771289717,0.310874401165561,0,0.955780602982214,0,0.465788870628778,0.414706207840855,1.06336685823198,0,1.6528336989694,0,0.813741466409323,0,0.644463342254931,0.928067519756987,0.398095888698616,0.800055529326307,1.37358282073117,2.02049693259551,2.52369796457302,0,0,0,0.226705925512272,0,0,0.179088841081487,0.617602894321944,0,1.23682402162117,0.38582807654183,0.168942440653073,0.256241518587947,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.850299680406731,0,0,0.318004350653419,0,0,0,0.3062454773532,0.578063025868136,2.8339315265117,1.59633859057151,1.02558182120378,0,0.691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.337687923091973,1.56215619722769,1.03343398250592,0.697573912132975,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0,0,0.543757863814654,0.591954962065642,0,0,0,1.25692471932802,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0.157771562193185,1.22384682343646,0,0.5290268405154,4.46394021800102,3.23522940041993,3.46101249699031,0.252332849670158,0,0,0.101988829741982,0,0,0.250707539292375,0.151557396436479,0,0,0.310298987585686,0,0,0.0645889098360061,0.124149428591716,0,0.12729431655633,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | |phase1_expression=1.2717486548939,3.21150785836475,0.845726424575827,2.00146596706261,3.12872766099101,0.872338524100369,0,1.89515962028049,3.13422753839806,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0.730310090387373,0,0.246242116153576,0.204000691244253,1.25381888591235,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.1686349143074,1.00267582127178,2.31754430337318,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,4.58938593198102,1.06400514659507,1.68203280042692,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0.936480230490962,0,0.448346041655403,0.704606991862589,0.485618833104395,0.561803226808994,0.408308342509787,0.859840221182376,1.34323515528495,0,1.48360157567134,0,1.43723628363248,0.168336113954066,0.125118519871964,0.277064115484183,1.75591048352335,1.5324389789951,0.150238058906597,0.113432183160021,1.61450672119976,1.06778694409284,1.27159140695737,0.600182192168805,0.92747276314595,0.257640540045629,1.30281799432113,0.168776332241266,1.85130309806277,0.252433774244115,1.10459878370759,1.45481451136931,1.42003837006646,2.21654616100809,0.67824236924195,0,0,0,0.853815942907168,0.132529768321485,0.69716365721711,0.414644220061482,0.756962552626885,0.36497735907583,0,0.643240938192885,1.38134921352481,0.928735856063958,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,1.29271715757778,3.57656445851882,2.535908257668,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0,0,0.977208552881205,0,0,0.602878754119172,0,1.49959486773086,0,0,0,0.718874566474748,0,0,0.579125226670317,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,1.03985430765404,4.10386674233472,0.788512075169673,0.937131319941706,0,4.5481500811197,1.03473071292505,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0.496215615637554,0.61384789315225,1.96462066103151,0.512556597022804,2.55853624533352,0.64341568457443,1.48418066444991,2.15893571323718,1.9531789784444,0.328508624055237,1.55776328755086,1.62694529843943,0,0,0,0.918515585316854,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0,0,0,0,1.88887408098384,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0.318203247925937,0,0,0,0.353437207037059,0.404364963146632,0,0,0,0,3.16950440270266,0.272999822815972,2.82810863907426,0,0,1.99031692572366,0,0.578775534266688,0,0.608731130888112,0.30982349809975,0,0.286822704408103,0.88424136911809,0.7133421029625,0.354761064070598,1.47775344708365,1.64647446479951,0.75894634753143,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.19924798825107,0,0,0,0,1.55519793830904,0,0,0,0.394573622547734,0,1.11136990144637,0.969332746095218,0.927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,1.5677537021303,0,0.331737779793674,0,1.31631238292384,0,0,0.153900517007594,0.455768223388005,0,0,0,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0.522109747527277,0.067401132980677,0,1.1713222286267,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,1.54787429224455,0,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0.795229689809303,1.0896272488926,0.160753148465019,0.962776056180637,0.83088067605837,0,0,0.425246896606173,0,0.394028536495991,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,1.63293680054705,0,0,0.340776043570843,0,0.146552233678082,0,1.55139547633861,1.19009341568421,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,2.92863035764712,1.752673029891,0,0.110929051536852,0.558867626472451,0,0,0,0,0,0,0,0.597019211547496,1.40227985908335,1.66441758450784,0.568209015825267,1.0062716070103,0.889811221596536,0,0.453692771289717,0.310874401165561,0,0.955780602982214,0,0.465788870628778,0.414706207840855,1.06336685823198,0,1.6528336989694,0,0.813741466409323,0,0.644463342254931,0.928067519756987,0.398095888698616,0.800055529326307,1.37358282073117,2.02049693259551,2.52369796457302,0,0,0,0.226705925512272,0,0,0.179088841081487,0.617602894321944,0,1.23682402162117,0.38582807654183,0.168942440653073,0.256241518587947,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.850299680406731,0,0,0.318004350653419,0,0,0,0.3062454773532,0.578063025868136,2.8339315265117,1.59633859057151,1.02558182120378,0,0.691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.337687923091973,1.56215619722769,1.03343398250592,0.697573912132975,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0,0,0.543757863814654,0.591954962065642,0,0,0,1.25692471932802,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0.157771562193185,1.22384682343646,0,0.5290268405154,4.46394021800102,3.23522940041993,3.46101249699031,0.252332849670158,0,0,0.101988829741982,0,0,0.250707539292375,0.151557396436479,0,0,0.310298987585686,0,0,0.0645889098360061,0.124149428591716,0,0.12729431655633,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p7@THY1 | |||
}} | }} |
Latest revision as of 03:53, 16 September 2015
Short description: | p7@THY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_THY1_5end |
Coexpression cluster: | C2100_epithelioid_Mesenchymal_Adipocyte_tenocyte_Smooth_Chondrocyte_Olfactory |
Association with transcript: | 87bp_to_AK314018_5end |
EntrezGene: | THY1 |
HGNC: | 11801 |
UniProt: | Q9HBB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.65e-20 | 76 |
mesenchymal stem cell of adipose | 6.03e-11 | 8 |
fat cell | 1.05e-09 | 15 |
preadipocyte | 1.70e-09 | 12 |
fibrocyte | 3.52e-09 | 3 |
tendon cell | 3.52e-09 | 3 |
mesenchymal cell | 2.25e-07 | 354 |
connective tissue cell | 5.46e-07 | 361 |
stromal cell | 6.25e-07 | 28 |
extracellular matrix secreting cell | 7.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.67e-13 | 14 |
integument | 1.62e-09 | 46 |
integumental system | 1.62e-09 | 46 |
dense regular connective tissue | 3.52e-09 | 3 |
tendon | 3.52e-09 | 3 |
regular connective tissue | 3.52e-09 | 3 |
hypodermis | 9.70e-09 | 5 |
brain grey matter | 2.56e-08 | 34 |
gray matter | 2.56e-08 | 34 |
connective tissue | 6.29e-07 | 371 |