FFCP PHASE1:Hg19::chr11:118213331..118213357,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:118213331..118213357,- to FFCP PHASE1:Hg19::chr11:118213331..118213357,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=915 | |EntrezGene=915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1673 | |HGNC=1673 | ||
|TSSclassifier=strong | |||
|UniProt=A8MVP6 | |UniProt=A8MVP6 | ||
|association_with_transcript=0bp_to_ENST00000392884,ENST00000526561_5end | |||
|cluster_id=chr11:118213331..118213357,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_CD3D_5end | |||
|id=chr11:118213331..118213357,- | |||
|ontology_enrichment_celltype=CL:0000738!3.79e-32!140;CL:0000037!4.78e-32!172;CL:0000566!4.78e-32!172;CL:0002032!1.20e-28!165;CL:0000837!1.20e-28!165;CL:0000988!2.65e-28!182;CL:0002087!1.83e-26!119;CL:0002031!1.35e-22!124;CL:0000084!2.79e-20!25;CL:0000827!2.79e-20!25;CL:0000791!8.16e-17!18;CL:0000789!8.16e-17!18;CL:0002420!8.16e-17!18;CL:0002419!8.16e-17!18;CL:0000790!8.16e-17!18;CL:0000763!3.14e-15!112;CL:0000049!3.14e-15!112;CL:0002057!1.31e-14!42;CL:0000838!9.59e-14!52;CL:0000766!1.35e-13!76;CL:0000542!2.97e-13!53;CL:0000051!2.97e-13!53;CL:0000860!6.75e-13!45;CL:0000625!1.56e-12!11;CL:0002194!1.52e-11!63;CL:0000576!1.52e-11!63;CL:0000040!1.52e-11!63;CL:0000559!1.52e-11!63;CL:0002009!1.61e-11!65;CL:0000557!4.59e-10!71;CL:0000839!9.60e-10!70;CL:0000624!2.54e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.66e-28;25!CL:0000791;2.18e-24;18!CL:0000789;2.18e-24;18!CL:0002419;2.18e-24;18!CL:0000625;9.63e-18;11!CL:0000860;5.52e-13;33!CL:0002057;5.52e-13;33!CL:0002087;1.26e-10;104!CL:0000624;4.62e-10;6!CL:0000576;5.29e-10;48!CL:0000473;2.97e-08;39!CL:0000234;2.97e-08;39!CL:0000542;1.69e-07;53!CL:0000738;4.90e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.51e-32,168;CL:0000738,3.13e-30,136;CL:0000988,4.89e-29,177;CL:0002032,2.90e-28,161;CL:0000837,2.90e-28,161;CL:0000084,3.68e-28,25;CL:0000827,3.68e-28,25;CL:0002087,3.64e-26,115;CL:0000791,2.20e-24,18;CL:0000789,2.20e-24,18;CL:0002420,2.20e-24,18;CL:0002419,2.20e-24,18;CL:0000790,2.20e-24,18;CL:0002031,7.25e-21,120;CL:0000625,9.73e-18,11;CL:0000763,3.45e-15,108;CL:0000049,3.45e-15,108;CL:0000860,5.98e-14,42;CL:0002057,5.98e-14,42;CL:0000838,2.72e-13,52;CL:0000766,4.26e-13,72;CL:0000542,6.88e-13,53;CL:0000051,6.88e-13,53;CL:0000473,2.59e-11,48;CL:0000234,2.59e-11,48;CL:0002194,4.15e-11,59;CL:0000576,4.15e-11,59;CL:0000040,4.15e-11,59;CL:0000559,4.15e-11,59;CL:0002009,1.70e-10,61;CL:0000624,4.63e-10,6;CL:0000839,3.83e-09,66;CL:0000557,6.71e-09,67 | |||
|ontology_enrichment_development_v019=CL:0000790;2.18e-24;18!CL:0002057;3.51e-11;42!CL:0000051;1.69e-07;53 | |||
|ontology_enrichment_disease=DOID:1036!2.45e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.29e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.22e-08,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.14e-16!115;UBERON:0002390!8.80e-16!102;UBERON:0003061!8.80e-16!102;UBERON:0002193!2.49e-14!112;UBERON:0000178!1.17e-08!15;UBERON:0000179!1.17e-08!15;UBERON:0000463!1.17e-08!15;UBERON:0002405!3.91e-08!115;UBERON:0002371!4.08e-08!80;UBERON:0001474!8.81e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.35e-13;15!UBERON:0000179;9.35e-13;15!UBERON:0000463;9.35e-13;15!UBERON:0002390;9.89e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.89e-17,98;UBERON:0003061,1.89e-17,98;UBERON:0002193,1.39e-16,108;UBERON:0000178,9.42e-13,15;UBERON:0000179,9.42e-13,15;UBERON:0000463,9.42e-13,15;UBERON:0002405,3.80e-09,93;UBERON:0002371,5.06e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4407426443737,44.9080395773739,3.40595471295367,0,0,0,0,0,0,9.97191735357379,10.0272223735071,13.237663113667,2.01523926815932,5.50619232232265,2.83333124397605,2.4717700592526,1.13362783106643,0.727752183563449,2.32429036905685,0.411167888021826,1.54853185447552,1.7261543539329,2.0492856522328,1.6553756092201,2.75796544589295,0.645484683583826,4.06279459783025,1.12945403725563,4.36649840092553,1.57306439111559,3.97909060082173,4.17207735198922,1.27867425159808,1.31940520074686,1.19678194572979,0.426224750532694,3.19230162491442,2.8369261234557,0.622822248995575,1.25624332628372,2.60741459210101,0.868755378820466,3.02699751316684,5.15588690382591,1.89877432464531,0,0,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0.382273228125229,0,22.4203425192614,0,43.4728591951571,61.3096789888697,80.3901861088081,106.330611068471,102.991436256215,116.468160210744,93.5168296357974,134.80665283106,108.41497395074,114.533023499732,81.2411591295047,163.060250010784,172.198576169279,187.623649152794,172.718761116155,105.778126293294,66.7289534229272,73.8412685527608,109.762299995226,98.6924374895801,129.145306343847,122.331370591816,109.051487260406,120.736292028833,144.540526756125,157.77503937843,98.4761278768634,115.315936650131,113.686961162635,118.625403274052,123.990327535078,89.1101805053317,84.7785420633718,67.9226454210327,0,0,0,0,0,0,0,0,0,0,0.351339142772504,1.76821751921912,0,0,0.649094787309367,0.348259474598534,0.531831842075461,1.19245312152671,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,11.6334079244498,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,1.18157981336281,223.821791403228,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,49.6517515708857,75.038396051112,35.8077071220498,0,0,0,0,0,0.749007023947182,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.6016678661873,25.2385614957782,31.5913571098195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.564862804660675,0,0,0,0,36.028780255484,41.2904091856883,31.3305952945789,36.2112298695839,35.7885177584989,32.4236655596359,41.0423892300967,40.4493839910078,0,0,0,0,0,163.839665231398,63.9299353642578,20.9558340004457,0,0.423347165447766,0,0,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0,10.301028434124,0,0,7.66065526394986,0,0,0.879049075631364,0,0.111443384277478,0,0.23874448473769,0.296964680832639,0,0,0,0,15.3267603030886,0,2.59022384726391,16.5770349318689,0,0,0,0,0,0,0,1.38100767891707,50.2914493928574,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0,0,0.692552326534174,0,0,0,0,1.91400695839152,0.183195186803725,2.13213910407454,214.605926211047,0.784901281975124,2.49317522850235,12.1821656733278,16.4692528826901,16.4465155236326,10.246701567106,1.43042921082341,0,0,0.282706142867882,0,2.98578579323551,3.36138745112689,4.888241159469,0,0,0,0.202203398942031,1.60515529459758,0,0,0,0,0.394584402849391,9.67925728389311,0,1.64285107034069,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,2.13375836274523,0,0,0.274083849293502,0,0.189932387867636,0,0,3.62870091056899,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0,0.0671834724867263,0,0,0.472699093843342,0.329663433524666,0.404421263125109,0,0.169346664131569,0,0.408610218334727,0,0,0,0.449947783103001,0,0,0,0.472834243795189,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,2.54486814322951,0,0,0.293104467356165,0,0,0.26446520348538,0,0,2.45611048905698,0.314408610199332,7.87054205159671,25.3044671124095,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.372578417648301,0,0,0,0,1.17632909849086,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3126252502696,3.05589132720735,0.163565394255844,0,0,0,26.1983488569958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.207471757392654,0.161475645631851,1.42769420259154,0,0,0.183428598521679,0.115525666150338,0,0,0,0.601682626794058,0,0.781514011233092,0,0,0,0,0,0,0,0,2.19303106742873,2.97726707033577,0,0,0,0,0,0,0.443511850813194,0,0,0.135939465953663,0.0657727735628491,0,0,1.02041020705668,0,0,1.82631744101899,0.431855182437243,0,0.571812353413251,0,0,0,0,0,0,0,3.4418188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| ||
|short_description=p2@CD3D | |||
}} | }} |
Latest revision as of 23:57, 15 September 2015
Short description: | p2@CD3D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD3D_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000392884, ENST00000526561_5end |
EntrezGene: | CD3D |
HGNC: | 1673 |
UniProt: | A8MVP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.89e-17 | 98 |
blood island | 1.89e-17 | 98 |
hemolymphoid system | 1.39e-16 | 108 |
blood | 9.42e-13 | 15 |
haemolymphatic fluid | 9.42e-13 | 15 |
organism substance | 9.42e-13 | 15 |
immune system | 3.80e-09 | 93 |
bone marrow | 5.06e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.22e-08 | 8 |